Aythya fuligula (tufted duck): 116494727
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Entry
116494727 CDS
T07966
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116494727 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aful03041
]
116494727 (RBM22)
Spliceosome [BR:
aful03041
]
Complex B
Other components
Prp19-related factors
116494727 (RBM22)
Complex C
116494727 (RBM22)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
116494727
NCBI-ProteinID:
XP_032052670
UniProt:
A0A6J3DRU3
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Position
14:13954664..13961648
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AA seq
420 aa
AA seq
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MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcgctgggctccaacacctacaaccggcagaactgggaggacgccgatttc
cctattctgtgccagacatgtcttggagagaacccctacattcgcatgaccaaagagaag
tatggaaaggaatgcaagatttgtgccaggcccttcacagtgttccgctggtgccctggt
gttcgcatgcgcttcaagaaaacagaagtgtgccagacatgcagcaagctgaagaacgtc
tgtcagacctgcctgcttgacctggagtatggtttgccaatccaagtccgagatgcaggg
ctctcccttaaggatgaaatgcctaaatctgatgtcaataaagagtattacacccagaac
atggaacgtgagattgccaactctgacggcaccaggccagtgggtgcgctaggaaaagcg
acttccaccagtgacatgctgctgaagctggcgcggaccacgccatactacaaacgtaac
cgtcctcacatctgctccttctgggttaaaggagaatgcaagcgaggagaagagtgtcct
tacaggcacgagaagcctacagatccagatgatcctctggctgatcagaacatcaaagat
cgttactacggaattaacgatcctgtggctgataagctgctgaaacgagcatcgaccatg
cctcgactggaccctcctgatgacaagaccatcactacgctgtatgtcggagggctcgga
gataccatcactgagtcggatctcagaaatcacttctaccagtttggggaaattcggacg
ataacggtggtgcagaggcagcagtgtgctttcatccagtttgccacccggcaagctgca
gaagtggctgctgagaaatccttcaacaagctcatcgtcaacggccgcaggctcaatgtc
aaatggggaaggtctcaggcagcaagaggaaaagagaaggacaaagaaggtaccacagaa
tctgggataaagctggaaccagttccaggacttcccggagctctcccacctcctccagct
gcagaagaggaggcttctgcaaattacttcaacctacctccaagtggccctccagctgtg
gtgaacattgccttgccaccacctcctggcattgcgccgccaccacctccaggttttgga
ccacacatgttccacgccatggggccgccgcctcccttcatgagagctccgggccccatt
cactacccgtcccaagatccccagaggatgggtgcccacgcgggaaagcacagcagcccc
tag
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