Aythya fuligula (tufted duck): 116495300
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Entry
116495300 CDS
T07966
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful00260
Glycine, serine and threonine metabolism
aful00630
Glyoxylate and dicarboxylate metabolism
aful00670
One carbon pool by folate
aful01100
Metabolic pathways
aful01200
Carbon metabolism
aful01230
Biosynthesis of amino acids
aful01240
Biosynthesis of cofactors
aful04981
Folate transport and metabolism
Module
aful_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
116495300 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116495300 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116495300 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
116495300 (SHMT1)
Enzymes [BR:
aful01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
116495300 (SHMT1)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
116495300
NCBI-ProteinID:
XP_032053605
UniProt:
A0A6J3DUI2
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Position
15:2774745..2779241
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AA seq
484 aa
AA seq
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MEKSAANSGLPSTELWASHNKMVMEPLDSNDPEVHSIIKKEKQRQRLGLELIASENFASR
AVLEALGSCLNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYRLDPQKWGVNVQPYS
GSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTG
YIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADANGAYLMADMAHISGLVAAG
VVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPG
LQGGPHNHAIAGIAVALRQAMTPEFKAYQQQVVANCRALAAALVELGYDIVTGGSDNHLI
LLDLRSRGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFQQDDFR
MVAQYIHRGIELTLRVQNEMSPKATLKEFKEKLEEEKYQKELKALKMEVEAFAATFPLPG
LPVL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcggcagccaactcgggcctccctagcacggagctctgggcctcccacaac
aagatggtgatggagccgctcgacagcaacgaccccgaggtgcacagcatcatcaagaag
gagaagcagcggcagaggctggggctggagttgatcgcctcggagaactttgcgagccga
gcggtcctggaggctctgggatcctgcctgaacaacaaatactctgagggctacccagga
cagaggtactacggcgggaccgagtttgtggacgagctggaaaggctgtgccagaagcga
gccctgcaggcctaccgcctcgacccccagaagtggggcgtcaacgtccagccctactca
ggctcccccgccaacttcgccgtctacacggccttggtggagcctcacggcaggatcatg
gggctggacctgcccgacggggggcacctgacgcacggcttcatgacggacaagaagaaa
atctcggccacctccgtcttcttcgagtccatgccctacaaggtcaaccccaagacgggt
tacatcgattacgaccgcctggaggagaacgcccgcctcttccaccccaagctgatcata
gcaggtgtcagctgctactcgcgcaacctggactatgcccgcatgcggaagatcgccgac
gccaacggcgcctacctgatggccgacatggcccacatcagcgggctggtggcagccggc
gtcgtgccctcgcccttcgagcactgcgacgtcgtctccaccaccacgcacaaaaccctg
cggggctgcagggccggcatgatcttctaccgcaaaggcacccgcagcgtggaccccaag
acgggcaaggaaacgctctacaacctggagagcctcatcaaccaggcggttttccccggg
ctgcagggggggccgcacaaccacgccatcgcagggatcgccgtggcgctgcggcaggcc
atgacgcccgagttcaaggcctaccagcagcaggtggtggccaactgcagggcgctggcg
gcggcgctggtggagctgggctacgacatcgtcacggggggctccgacaaccacctcatc
ctcctggacctgcgcagcagaggcacggacggcggccgggccgagcgggtgctggagctc
tgctccatcgcctgcaacaagaacacgtgtcccggcgatgtcagcgccctgcgccccagc
gggctgcgttttgggaccccagctctcacctcccgtggctttcagcaggatgatttccgc
atggtggctcagtacatccacagagggatcgagctgacgctgcgggtgcagaacgagatg
agccccaaggccacgctgaaggagttcaaggagaaactggaggaggagaaataccagaag
gagctcaaggcgctgaagatggaggtggaagctttcgcagcgaccttcccgctcccaggg
ctgcccgtcctgtaa
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