Aythya fuligula (tufted duck): 116495377
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Entry
116495377 CDS
T07966
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116495377 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aful01001
]
116495377 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aful04054
]
116495377 (CIITA)
Enzymes [BR:
aful01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116495377 (CIITA)
Protein kinases [BR:
aful01001
]
Serine/threonine kinases: Other
TAF1 family
116495377 (CIITA)
Pattern recognition receptors [BR:
aful04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116495377 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
NB-ARC
RsgA_GTPase
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
116495377
NCBI-ProteinID:
XP_032053689
UniProt:
A0A6J3DSP7
LinkDB
All DBs
Position
15:16882289..16915196
Genome browser
AA seq
1215 aa
AA seq
DB search
MNLFKEILPRIRKILSGATASDDHALLNLMLKEHVISKEYHQALLHEKDREDLARKISLT
FVEKWDMYWNTLIPHSCLNLCGSRPQNIIDNEPTGTKHMSDSKRQIMDSALVCENGYLDL
LHSDIDPVHLFTLLDPKPSGNEEGDLFADSEIDASNYDQLNSMDFLCTVENDENGDELYP
SSNAREAYARIAELAEYVLKDQQEKQVEDSFAGSLILDEMTAENTEIFTDVKMQKCHKRT
FLGSIESCADVSEPKYKKIVDAPAVSTRNGSFLAMPLSSHPASSTSLTHQHMSFSVPAIN
ALGRSFVIPVSGSSAPLIPECLPFGMKDKQENVDFADLAQQKNNFLIGNGTSSIIAYPAL
TTSTETMFSPSFRVNVCGLEIFKEVQVPLIPSEELFKRPRSVEVFCRALKDYFGDICKYV
AMEREVTLDHLFIDGTLVQNQIETKTGKHSVKAMEKELVTYNLQWKEKASLERSQIFQIP
GGKDLETKVIVVLGKAGMGKSILVQKICQDWSNGEFPQFEFLFWFDCKQISLPEKCYSLK
DLFLYFFVKPQEGSNEIFEYILQNPAKVLLVFDGFEGLHDHENFPRCSDRQPDKGLYSIK
ELLSGLIQKKILSGCTLLLTGRPKDKVNQYVSKVDKTIEIVGFSPQQRELYITKYFEGLP
YCDNALKLIKESEYLFSHCYSPVICRFVCFLCETVLEMGDKGLPSTLTTLFLKFVQQKII
PMQTDVTAVQNQKCLATLARIAWYLGEKHQSTMRSDILPSKELKEFALKYGFFLPFAFPK
HSDTEEEELGTTFSDFVIQNFLGALHLLLAEDVKDKSLTKYLSFPSKKKKPYNWLDLVPR
FLAGLLFLQDDAYFCSLSNKEIKQSTKKQKTLLKYVRRLQINDLCPERLLELLHCIYETQ
YNYLLQHVTLRLKTDLSFHGIFITPPDVHVLYSTLKRSRKEFSLDLQNSNIDMQGLKDLV
GLKNVASFRASLGDTIRLWKYLEQTKDYEMLKLSTEKFVLDPFKAKTMKDVSDLSDLVEM
QEIISCMQDASGCSSYEITAIKNLRKIEFALGPAYGLQGFLKLVEILPSFPSLQHLDLDA
LSENGIGDEGAKSLSEVFPTLRSLEILNLSQNKITDVGAEKLATTLPSLSSLTTLSLYNN
NICDFGAENLAKVLHAMASLRVLDVQYNKITGVGAQQLTDSLRKCPHIKNLLIWNPTIPY
GVLEHLQQLDSRISV
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttttaaggagatcctgcctagaataaggaagattctttcaggtgctacagct
tctgatgaccatgcattgcttaacctcatgctgaaagaacatgtgatatccaaggagtac
catcaggccttgctccatgaaaaagacagagaggaccttgcaaggaagatttctctgaca
tttgtggagaaatgggacatgtattggaacactttgattccccactcttgtttaaacctc
tgtggcagtagacctcaaaacatcatagataatgagccaacaggaaccaagcacatgtct
gacagcaagagacaaatcatggattcagcattggtgtgtgaaaatggctatcttgatttg
ctgcacagtgacatcgatccagtgcatctgtttactctcttagaccctaagccatctgga
aatgaagagggtgacttgtttgcagattctgaaattgatgccagcaactatgatcagttg
aatagtatggatttcctgtgtacagtggaaaatgatgaaaatggggatgagttgtatccc
tcttccaatgccagagaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatcagcaggagaagcaagtggaagatagttttgcagggagccttattttggatgaaatg
actgctgaaaacactgagatatttactgatgtaaagatgcagaaatgtcacaaaagaaca
tttttaggctccatagagagttgtgctgatgtttcagaacccaaatacaagaaaattgtg
gatgcccctgcagtgtctacaaggaatggcagtttcttggctatgcctctcagcagccat
ccagctagctccacctcgctaactcaccagcacatgtccttttctgttcccgctatcaat
gcactgggaagaagttttgtaattcctgtttcaggatcttcagcacctttgattccagag
tgtctaccctttggcatgaaagacaaacaagagaatgtagactttgcagatcttgctcag
cagaaaaataattttttaataggaaatggcacatcaagtattatagcatatccagcactg
actacctccactgaaacaatgttttccccgagttttcgagttaatgtatgtggcttagaa
atattcaaagaagtccaagttcctctaattccttctgaagaacttttcaaaagaccaagg
tcagtggaagttttctgtagagcgcttaaggattacttcggagacatatgcaaatatgtg
gccatggagcgtgaagtgactcttgatcacttgtttattgatggtacacttgtgcaaaac
caaattgaaaccaagactggaaagcacagtgtaaaagcaatggaaaaggagctggtaact
tacaatctacaatggaaggaaaaggcatcacttgaaagaagccaaatatttcaaatccca
ggaggtaaagatttagagactaaagtgattgtggtgctgggaaaagcaggaatgggcaaa
agcattcttgtacagaagatctgtcaggactggtccaatggagagtttcctcagtttgaa
tttctcttttggtttgactgcaaacaaataagcttgcctgagaagtgttacagcttgaag
gatctgtttctttatttttttgtaaaacctcaagagggaagcaacgagatctttgagtac
atattgcaaaatcctgctaaagtccttctggtttttgatggttttgaagggttgcatgac
catgagaattttcctcgttgctcagacagacagcctgacaaaggcttgtacagtataaag
gagctgctttcaggacttatccaaaaaaaaatactcagtggctgtactttattacttaca
ggaagaccaaaagacaaggtgaaccagtatgtgtccaaagtggataagactattgaaata
gtaggattctctcctcagcagagagaattgtacataaccaaatactttgaaggattaccc
tactgtgataatgcactgaaattaatcaaagagagtgagtacctcttcagtcattgttac
agccctgttatatgtagatttgtttgttttctctgtgagacagtacttgaaatgggagac
aaaggccttccttcaactcttactacacttttcctgaaatttgttcagcaaaagataata
cctatgcaaacagatgttacagctgtgcaaaatcaaaagtgccttgctacactagcccgt
atagcctggtatcttggagaaaagcaccaaagtaccatgagaagtgatattcttccttct
aaggaacttaaagaatttgctctgaaatatggatttttcctgccatttgcattccccaaa
cattcagatactgaggaggaggaacttgggaccacattctccgattttgtcattcagaat
ttcttgggtgcgcttcaccttttattagcagaagatgtgaaggataaaagtctaacaaag
tacctgtcttttccatccaagaagaaaaagccttataactggttagacttagtgcctcga
tttttggctggattgttgttcctccaggatgacgcctacttctgctccctttctaataag
gaaataaaacaatccaccaagaagcagaaaacactcctgaaatatgtcagaaggttgcag
ataaatgacctctgtccagagagattactcgagcttttacactgcatatatgaaacacaa
tacaattatctgttgcagcatgtgaccttaaggctcaagacagacctgtcttttcatggc
atttttattacaccaccagatgttcatgtactctactctactttaaaaaggtcaagaaaa
gagttttccttggatttgcaaaacagcaacattgacatgcaggggctaaaagacttggtt
ggcctgaagaatgtggcatcattcagggcctcccttggtgatacaatcaggctatggaaa
tacttagaacagacaaaagactatgaaatgctgaaactgtcaacagaaaaatttgttctc
gatccctttaaggcaaagacaatgaaggatgtcagtgacctttcagaccttgtagaaatg
caggagataatcagttgcatgcaagatgcctctggttgcagcagctatgaaattactgct
ataaagaacctgagaaaaatagaatttgctctaggtccagcatatggccttcagggattt
ctaaaacttgtggaaattctgccgtcatttccatcacttcagcatttagaccttgatgct
ctgagtgaaaatggcataggagatgaaggagcaaagagtctatctgaagtctttccaaca
ctgagatcactggaaatattgaacttatcacagaataagataacagatgtgggtgcagag
aaactagctacaactcttccttccttatcttcgttaacaacactaagcttgtacaataat
aacatttgtgattttggagcagaaaatcttgcaaaagttcttcatgcgatggcatcttta
agagtgctagatgttcagtataacaaaataactggtgttggagcccaacagctgactgac
agcctacgaaaatgcccccatataaaaaacttgttgatatggaatcctacaattccttat
ggagttcttgaacaccttcagcagctggactcgaggatcagtgtgtag
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