Aythya fuligula (tufted duck): 116495455
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Entry
116495455 CDS
T07966
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03430
Mismatch repair
aful03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116495455 (PMS2)
03460 Fanconi anemia pathway
116495455 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aful03400
]
116495455 (PMS2)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116495455 (PMS2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
116495455
NCBI-ProteinID:
XP_032053816
UniProt:
A0A6J3DQS4
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Position
15:complement(7514616..7527170)
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AA seq
871 aa
AA seq
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MEAAAEPSPEPAKAIRAIDSRSVHRICSGQVVLSLGTAVKELVENSLDAGATNIDIKLKD
HGTEQIEVSDNGGGVEEENFEGLTLKHYTSKIQDFSDLVHVETFGFRGEALSSLCALSDV
TIFTCHKSAKVGTRLVFDHNGKITQKTPYPRQQGTTVNIQQLFYTLPVRHKEFQRNIKKE
YAKMVQILQAYCIISKGVRINCTNQVGQGKKSSVVSTTGSPSLKENIGAVFGQKQLQSLI
PFVQLPPNEAVCEEYGLNATDMPQNLYSITGFISRCDHGVGRSATDRQFFFINQRPCDPA
KVVKVVNEVYHLYNKHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLM
EMFGSDLNKLNVNQKLLDITGNLKKTLPEETEKPREEMLLDSETENASSGGKRMTLARLR
ESFSLHQTESNFQSPKRSKQQHSSPRQLSLDTVLSTVKTRKTALSEESESCHEMESKMSI
PKRCLRKLEDNTDSGFCSTSESDVGYNTAEAGSCVNSESVIIPPEEEISSSEEQLQNECP
KTAGHGEKSLECDVQVLGSKLKLNRVNDWNNQSNLSLEAGNSSPRGKCFKSESGDFKAGI
HPDVKNTKNYMPTVDVPVEVKKKTVPLEFSMKLLAERVRKVMQQQRKSTETQNYRRFRAK
ISPGENKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEM
LQQHTVLQGQKLIAPQNLNLTAVNETVLIENLEIFRKNGFDFVINEDAPVTQRVKLISLP
TSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNIQEMRKLV
THMGEIEHPWNCPHGRPTMRHIVSLDLISSE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcggagcccagcccggagcccgccaaggccatcagggccatcgacagc
aggtccgtgcatcgcatctgctccgggcaggtcgtcctgagcctcggcaccgccgtcaag
gagctggtggagaacagcctggacgcgggagccaccaacatcgatataaaactgaaggac
catggaacagaacagatagaggtttcagataatggaggtggagtggaagaagaaaacttt
gaaggcttgactctgaaacattacacatcaaagatacaagatttttctgatctagtacat
gtcgaaacatttgggtttcgaggtgaagctctcagttcactgtgtgcattaagtgatgtt
accatttttacctgtcataaatctgcaaaggttgggactcgtttggtatttgatcacaat
ggtaaaattactcagaaaactccttatccacgacaacaaggaacaactgttaacatacag
cagttgttttatactctgccagtacgacataaagaatttcaaagaaacattaaaaaggaa
tatgcaaaaatggtccagatattgcaagcatactgtattatttcaaaaggagtgcggatt
aattgcactaatcaggttggccaagggaaaaaaagctctgtggtatccactactggaagt
cctagtttaaaggaaaacattggagcagtatttgggcaaaaacagttgcagagcctcatc
ccttttgttcagctacctcctaatgaagctgtttgtgaagaatatggacttaacgctact
gacatgccacaaaatctttatagtattacaggcttcatttctcgttgtgatcatggtgtt
ggaaggagcgcaacagacaggcaatttttctttatcaaccaacgtccatgtgatccagca
aaggttgtcaaggttgtgaatgaagtttatcacttgtacaataaacaccagtatcctttt
gttgtccttaacatttctgtggattctgaatgtgttgacatcaatgtaactccagacaaa
aggcaaattttacttcaggaggaaaaacttttattagcaattttaaaaacttctctgatg
gagatgtttggtagtgaccttaacaagctgaacgtcaatcagaaacttctggacattaca
ggcaacttgaagaaaacacttcctgaagagacagaaaagcctcgggaagaaatgctgctt
gattctgagactgaaaatgcaagcagtggaggaaaaagaatgactcttgcaagattaagg
gagtcattctctctccaccaaacagagagtaattttcaaagccctaaaaggtcaaaacag
cagcacagctcccctagacaactgtcactggatactgttttgagtactgtgaagactcga
aagactgccttgagtgaggagtctgagagttgtcatgagatggaatcaaagatgtcaatt
ccaaaaagatgtttgagaaaattagaagacaatacagattctggattctgtagcacctct
gaatcagatgttggatataatacagcagaagctgggagctgcgtcaatagtgaaagtgta
attattcctcctgaagaagaaatctctagctcagaagaacaacttcaaaatgagtgtcct
aaaactgctggacatggtgagaaatcattggaatgtgatgttcaggtcttgggcagtaaa
cttaagttaaatcgcgtgaatgactggaataatcaaagtaacttatctctggaagcgggt
aactcttccccaagaggaaaatgttttaaaagtgagtcaggtgacttcaaggcaggtata
catcctgacgtgaagaatactaaaaactacatgccaactgttgatgtaccggtggaagtt
aaaaagaaaactgtgccacttgagttctctatgaagcttttagcggaaagggtaagaaag
gtaatgcagcaacaacggaaaagtacagaaacgcaaaattacagaagatttagagcaaaa
attagtcctggagaaaataaagtagcagaagatgaattaagaaaagagatcagtaaagaa
atgtttgcaaaaatggagatcattggccagttcaatttagggtttataatagcaaaattg
aattctgatcttttcataattgaccaacatgctactgatgagaaatacaactttgagatg
ttacaacaacacacagtgcttcaaggtcagaagctgatagcgcctcaaaatctcaactta
actgctgtaaatgaaacagtattgattgaaaacctagaaatattcagaaaaaatgggttt
gattttgtgataaatgaagatgctcctgtaactcagagagtgaagttaatatctttgcca
acaagcaaaaattggacttttggtccacaagacatagatgagctgatcttcatgttaagt
gactgtcccggagtcatgtgtagaccctccagggtcagacagatgtttgcttctcgagct
tgcagaaaatctgtgatgattggaactgcactgaacatacaggagatgagaaaactggtc
acccatatgggtgagattgagcatccctggaactgcccccatggaaggcctactatgaga
cacatagtcagtctagacttgatttcatcagagtaa
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