KEGG   Aythya fuligula (tufted duck): 116495455
Entry
116495455         CDS       T07966                                 
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
  KO
K10858  DNA mismatch repair protein PMS2
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful03430  Mismatch repair
aful03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aful00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    116495455 (PMS2)
   03460 Fanconi anemia pathway
    116495455 (PMS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aful03400]
    116495455 (PMS2)
DNA repair and recombination proteins [BR:aful03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     116495455 (PMS2)
SSDB
Motif
Pfam: MutL_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 116495455
NCBI-ProteinID: XP_032053816
UniProt: A0A6J3DQS4
LinkDB
Position
15:complement(7514616..7527170)
AA seq 871 aa
MEAAAEPSPEPAKAIRAIDSRSVHRICSGQVVLSLGTAVKELVENSLDAGATNIDIKLKD
HGTEQIEVSDNGGGVEEENFEGLTLKHYTSKIQDFSDLVHVETFGFRGEALSSLCALSDV
TIFTCHKSAKVGTRLVFDHNGKITQKTPYPRQQGTTVNIQQLFYTLPVRHKEFQRNIKKE
YAKMVQILQAYCIISKGVRINCTNQVGQGKKSSVVSTTGSPSLKENIGAVFGQKQLQSLI
PFVQLPPNEAVCEEYGLNATDMPQNLYSITGFISRCDHGVGRSATDRQFFFINQRPCDPA
KVVKVVNEVYHLYNKHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLM
EMFGSDLNKLNVNQKLLDITGNLKKTLPEETEKPREEMLLDSETENASSGGKRMTLARLR
ESFSLHQTESNFQSPKRSKQQHSSPRQLSLDTVLSTVKTRKTALSEESESCHEMESKMSI
PKRCLRKLEDNTDSGFCSTSESDVGYNTAEAGSCVNSESVIIPPEEEISSSEEQLQNECP
KTAGHGEKSLECDVQVLGSKLKLNRVNDWNNQSNLSLEAGNSSPRGKCFKSESGDFKAGI
HPDVKNTKNYMPTVDVPVEVKKKTVPLEFSMKLLAERVRKVMQQQRKSTETQNYRRFRAK
ISPGENKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEM
LQQHTVLQGQKLIAPQNLNLTAVNETVLIENLEIFRKNGFDFVINEDAPVTQRVKLISLP
TSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNIQEMRKLV
THMGEIEHPWNCPHGRPTMRHIVSLDLISSE
NT seq 2616 nt   +upstreamnt  +downstreamnt
atggaggcggcggcggagcccagcccggagcccgccaaggccatcagggccatcgacagc
aggtccgtgcatcgcatctgctccgggcaggtcgtcctgagcctcggcaccgccgtcaag
gagctggtggagaacagcctggacgcgggagccaccaacatcgatataaaactgaaggac
catggaacagaacagatagaggtttcagataatggaggtggagtggaagaagaaaacttt
gaaggcttgactctgaaacattacacatcaaagatacaagatttttctgatctagtacat
gtcgaaacatttgggtttcgaggtgaagctctcagttcactgtgtgcattaagtgatgtt
accatttttacctgtcataaatctgcaaaggttgggactcgtttggtatttgatcacaat
ggtaaaattactcagaaaactccttatccacgacaacaaggaacaactgttaacatacag
cagttgttttatactctgccagtacgacataaagaatttcaaagaaacattaaaaaggaa
tatgcaaaaatggtccagatattgcaagcatactgtattatttcaaaaggagtgcggatt
aattgcactaatcaggttggccaagggaaaaaaagctctgtggtatccactactggaagt
cctagtttaaaggaaaacattggagcagtatttgggcaaaaacagttgcagagcctcatc
ccttttgttcagctacctcctaatgaagctgtttgtgaagaatatggacttaacgctact
gacatgccacaaaatctttatagtattacaggcttcatttctcgttgtgatcatggtgtt
ggaaggagcgcaacagacaggcaatttttctttatcaaccaacgtccatgtgatccagca
aaggttgtcaaggttgtgaatgaagtttatcacttgtacaataaacaccagtatcctttt
gttgtccttaacatttctgtggattctgaatgtgttgacatcaatgtaactccagacaaa
aggcaaattttacttcaggaggaaaaacttttattagcaattttaaaaacttctctgatg
gagatgtttggtagtgaccttaacaagctgaacgtcaatcagaaacttctggacattaca
ggcaacttgaagaaaacacttcctgaagagacagaaaagcctcgggaagaaatgctgctt
gattctgagactgaaaatgcaagcagtggaggaaaaagaatgactcttgcaagattaagg
gagtcattctctctccaccaaacagagagtaattttcaaagccctaaaaggtcaaaacag
cagcacagctcccctagacaactgtcactggatactgttttgagtactgtgaagactcga
aagactgccttgagtgaggagtctgagagttgtcatgagatggaatcaaagatgtcaatt
ccaaaaagatgtttgagaaaattagaagacaatacagattctggattctgtagcacctct
gaatcagatgttggatataatacagcagaagctgggagctgcgtcaatagtgaaagtgta
attattcctcctgaagaagaaatctctagctcagaagaacaacttcaaaatgagtgtcct
aaaactgctggacatggtgagaaatcattggaatgtgatgttcaggtcttgggcagtaaa
cttaagttaaatcgcgtgaatgactggaataatcaaagtaacttatctctggaagcgggt
aactcttccccaagaggaaaatgttttaaaagtgagtcaggtgacttcaaggcaggtata
catcctgacgtgaagaatactaaaaactacatgccaactgttgatgtaccggtggaagtt
aaaaagaaaactgtgccacttgagttctctatgaagcttttagcggaaagggtaagaaag
gtaatgcagcaacaacggaaaagtacagaaacgcaaaattacagaagatttagagcaaaa
attagtcctggagaaaataaagtagcagaagatgaattaagaaaagagatcagtaaagaa
atgtttgcaaaaatggagatcattggccagttcaatttagggtttataatagcaaaattg
aattctgatcttttcataattgaccaacatgctactgatgagaaatacaactttgagatg
ttacaacaacacacagtgcttcaaggtcagaagctgatagcgcctcaaaatctcaactta
actgctgtaaatgaaacagtattgattgaaaacctagaaatattcagaaaaaatgggttt
gattttgtgataaatgaagatgctcctgtaactcagagagtgaagttaatatctttgcca
acaagcaaaaattggacttttggtccacaagacatagatgagctgatcttcatgttaagt
gactgtcccggagtcatgtgtagaccctccagggtcagacagatgtttgcttctcgagct
tgcagaaaatctgtgatgattggaactgcactgaacatacaggagatgagaaaactggtc
acccatatgggtgagattgagcatccctggaactgcccccatggaaggcctactatgaga
cacatagtcagtctagacttgatttcatcagagtaa

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