Aythya fuligula (tufted duck): 116495474
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Entry
116495474 CDS
T07966
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aful03000
]
116495474 (RAI1)
Transcription factors [BR:
aful03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116495474 (RAI1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
116495474
NCBI-ProteinID:
XP_032053844
UniProt:
A0A6J3DT47
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All DBs
Position
15:complement(2978181..2986119)
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AA seq
1906 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYSG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDEGLQAWGSQAQALPG
GVAKYEDSLMKKTAAPAGGRPYHEPAAATPLPFRTHFQQQQQQQPPALPYPKLQRQKLPN
DVSSPMPFPQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPPLERPLGSAA
SLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPPPQPPQPPQPQPQPLQGRHHAPE
TLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTP
SPLMPNLENFQYSQQPLNAGAFPAGIADHSHFMPLLNPSPTDGTSPDAQSGNCKNLPKEK
LPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKSAVPQKKGIKTPARTPEQLKGQHCS
PESSTYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCNQNRSPARVNS
NSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQ
EELASEIIVLQDAISEKGDKAWANSPMLSKEATKSPFQVENHRPCLDSMVKGAWPSQGDS
STLTEPLKLDKASGGSAGKDFGEEVYEGPQVEFAATETKDSLKDAAPLAFNSKPSIPAAT
SSAGASSFSCYSNTTANSVDSENAMEHFEWPEESLGEACLRWKELGSGLQASDLPKGLFP
SKMVGSCKEKKNACSLDLCDGEQPAKSEPARDFAQQAMEEEEEETLTYDEATKADSERWL
QDTRHCCSAGDFGEIPMISSPELKESDLEAEEYSSLCELAGAEQKPVPYDASPPKPPEMP
AVLSASEVPVSAEETVSTVEKEGSAPSARLSGQSVILLGPAVGTETKVKSWFKSSLPHIQ
PEEGGGGEKPHPEGADAEPLKKQLVPETVLGKTEPVSRGKSLRNKRVHCRLPEGDGAGGA
VPSPFDELPVACVRPDGQVEMPSKNAHSQTPRFAAEGLPARMCTRSFTALAEPRTPAPLE
GLKVPVHQEKLGKKPACGVKQRVAFKARKRSGRPAPKVVQNAGGDAALLVPSLVPAEEAA
GPTPPEGDAADAGERDQRSMILRSRTKTQEVFYTKRRRGKRAAEVRLKNCKAPKKLISNN
HLPPAFKLAPPGSPHKEGKVGARMKLPKTGPGVGGKMSERPLHSLKRKSTFISPIPAKKR
NLVLRSNSGGMKEEKPEGPPSLFKKMPVAKKVKAKLPPKSPGEAVPKPPPPKEAPDVCIK
ITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKPAATAAATAAAAATAA
ATYGTSLSPAGAERERAVKHGGVAPAVGDARLPKPAAAQKAPAAPSAEQFCRNAHGRVLK
GKPGSGKKLAADGFQGETCVPAVVAAQPGSAVVAKNAALLPKKRNRKGKAAALGMAKAPL
GPALPLPPPRERAAGPGGGDEGKKPKSEEKEAGGGEGPEGRSAGGPARGPKARANHANYN
GYSKRQRKRLAHGKAKAVPSRCKSRGKRRRQAQQAPLLHPAEPEIRLKYISCKRLRADSR
APPFAPYVRVERRGDFTTACTVVNSPGDEARLQRGPAGTAPRPRAALPASSTMHMGPVVS
KALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARAEGEEAGAAERGP
KGTESSWAAGGKPPRPEGAAEAAKQSSLRSSPRGMFRRLQSCYCCDERTEGEEAAEKPRR
HECNKAESPPQEPGAGDTQEHWLHEACAIWTAGVFLVAGKLYGLQEAVKAAADVKCSSCQ
QAGATVGCCQKGCPHTYHYACAIDTGCLLTEESFSLRCPKHKRQPV
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcaactgccgtactcgggc
tacgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcaaggcaggccggccttttccaattacgccgtgcaggagaacagcccctacccggcc
cgctattcgggggacgagggcctgcaggcgtggggcagccaggcgcaggcgctgcccggc
ggggtggccaagtatgaggacagcctgatgaagaagacggcggcgccggcgggcgggcgg
ccctaccacgagccggcggcggcgaccccgctgcccttccggactcacttccagcagcag
cagcagcagcagccgcccgcgctcccctaccccaagctgcagcggcagaagctgcccaac
gacgtctcctcgcccatgcccttcccgcagagcccccatttcgggcagcactcgcagtcc
ttccccgcctcctccacctactcctcggtgccggggggcagccagccggcgcactcctac
aagagctgcacggccccttcggggcagccgccgctggagcggcccctgggcagcgccgcc
agcctggcccccggcccccgcgtgcccaacctgcacggctaccagcccaaccgcatcggc
tacgagcagcccccgcagcccccgccgcagcccccgcagcccccgccgccgcccccgcag
cccccgcagcctccccagccccaacctcagcccttgcaggggaggcatcacgccccggag
accctccactaccaaaacctggccaagtaccagcattacaaccagccggggcagacctac
tgccagggcgacgcgccgcccgtccggacgccggagcagtactaccaaaccttcagcccc
agcgccagccactcgccggcacgctccgtcggccggtcgccgtcctacagctccacgccg
tccccgctgatgcccaacctggagaatttccagtacagccagcagccgctgaacgccggc
gccttcccggccggcatcgccgaccacagccatttcatgccgctgctgaacccttctccc
accgacgggacgagcccggatgctcaatccgggaactgcaagaacctgccgaaggagaag
ctgcccgaaaacctgctgtcggacctgagcctgcagagcctgacggcgctcacctcccag
gtggagaacatctccaacaccgtccagcagctgctgctctccaaatcggccgtgccccag
aaaaaaggcatcaagaccccggcgaggacccccgagcagctcaaggggcagcactgcagc
cccgagagcagcacgtactccgcggagcaggtggggacgccgctgtccgacccgctcagc
accccgcagtccgtccacgccgagacgcaggacgccgactatctcagtggctcggaggac
cagctggagaggagcttcctgtactgcaaccagaaccgcagccctgcccgcgtcaacagc
aactccaaggcgaagcccgagtccgtgtccacctgctccgtcacctccccggatgatatg
tccaccaaatcggacgattccttccagagcatccacgccagcctgcccctggagaccttc
accaagtacgtgaccaacgagcgggactgtccccggctgctcctcagcgcgctgtcccag
gaggagctggcctccgagatcatcgtcctgcaggacgccatcagcgagaagggggacaaa
gcctgggccaactcgcccatgctgagcaaggaggccaccaagtcccccttccaggtggag
aaccaccggccgtgcctggactccatggtgaagggcgcctggcccagccagggcgactcc
agcaccctcaccgagcccctcaagctggacaaggcttcggggggcagcgcggggaaggac
tttggggaggaggtgtacgagggtccccaggtggagtttgcggccaccgagaccaaggac
tcgctcaaggatgcggccccgctggccttcaactccaagcccagcatcccagccgccact
tccagcgcgggggcctccagcttcagctgctactcgaacaccacggccaactcggtggac
tccgaaaacgccatggagcactttgagtggccggaggagagcctgggcgaggcgtgcctc
aggtggaaggagctgggctcgggcctgcaagcctccgacctccccaagggcttgttcccc
agcaaaatggtggggtcctgcaaggagaaaaaaaatgcctgcagcttggatctgtgcgac
ggcgagcagccggccaagagcgagccggcccgggactttgcccagcaggcgatggaggag
gaagaggaggagacgctgacctacgacgaggccacgaaggcagacagcgagaggtggctg
caggacacccggcactgctgctcggccggggactttggcgagatccccatgatctcgtcg
ccggagctgaaggagtcggacctggaggcggaggagtactcctcgctctgcgagctggcg
ggtgcggagcagaagccggtgccctacgacgcctcgccgcccaagcccccggagatgccc
gccgtgctgtccgccagcgaggtgcccgtgtccgccgaggagaccgtcagcacggtggag
aaggagggctcggcgccctcggcgcgcctctccggccagtccgtcatcctgctgggcccc
gcggtgggcacggagaccaaggtgaagagctggttcaagtcctccctgccccacatccag
cccgaggagggcggcggaggggagaaacctcacccggagggggcggatgccgaacccttg
aagaagcagctggtgcccgaaaccgtgctggggaagacggagcctgtctcgaggggcaag
agcctccgcaacaagagggtgcactgccggctgccggagggggacggtgccggcggcgca
gtgccgagccccttcgatgagctgccggtggcgtgcgtcaggccggacgggcaggtggag
atgccgagcaagaacgcccacagccagacgcccaggtttgcggcggagggcttgccggca
cgcatgtgcacccgctccttcaccgccctcgccgagccccgcaccccggccccgctggag
gggctgaaggtgccggtgcaccaggagaagctggggaagaagccggcctgtggggtgaag
cagagggtggctttcaaagccaggaagcgcagcggccggccggcccctaaagtggtccaa
aacgccggcggcgatgccgccctcctggtgcccagcttggtgcccgccgaggaggcagcg
gggccgacgccgccggagggggacgcggcggacgcgggggagagggaccagcggtcgatg
atcctgcgctcccggacgaagacgcaggaggttttctacaccaagaggcggcggggcaag
cgggcggcggaggtgcggctgaagaactgcaaggcacccaaaaaactcatctccaacaac
cacctcccgcccgccttcaagctggcccctccgggcagcccccacaaggagggcaaggtg
ggagcccggatgaagctgcccaaaacggggccgggagtgggcggcaagatgtccgagcgg
cccctgcactcgctgaagaggaaatccaccttcatctcccccatccccgccaagaagagg
aacctggttctgcggagcaacagcggcggcatgaaggaggagaagcccgagggtcccccc
agcctcttcaagaagatgcccgtggccaagaaggtgaaagccaagctgccccccaagagc
cccggggaagccgtcccgaaacccccaccgccaaaggaggcccccgacgtctgcatcaag
atcacctcccgggcggccttccaggaggccaccaagaccaaagtgctgcctccccgcaag
ggccgcggcctcaagctggaggccatcgtgcagaaaatcacctcgcccaacctgaagaag
ttcgcctgcaagccggcagccacggcggcggcgacggcggcggcggcggcgacggcggcg
gccacctacggcacctccctgagcccggcgggggcggaacgggagcgggcggtgaagcac
ggcggcgtggccccggcggtgggcgacgcgcggctgcccaagccggcggcggcgcagaaa
gcacccgcggcgccgtcggccgagcagttctgccgaaacgcccacggcagagtgctgaag
gggaagccgggcagcgggaagaaactcgccgccgacggcttccagggcgagacgtgcgtg
ccggccgtggtggcggcgcagcccggctcggcggtggtggccaagaacgcggcgctgctg
cccaagaagaggaaccgcaagggcaaagcggcagcgctgggcatggccaaggcgcccctg
ggccccgcgctgccgctgccgccgccccgcgagcgggcggccgggccgggcggcggggac
gagggcaagaaaccaaagagcgaggagaaggaggcggggggcggcgagggccccgagggg
cgttcggcgggcgggccggcgcgcgggccgaaggcgcgggccaaccacgccaactacaac
ggctactccaagcggcagcggaagcgcctggcccacggcaaggccaaggcggtgccgtcg
cggtgcaagagccggggcaagcggcggcggcaagcccagcaagcgccgctgctgcacccc
gccgagcccgagatccgcctcaagtacatctcctgcaagcggctgcgggccgacagccgg
gctccccccttcgcgccctacgtccgcgtggagcggcgcggcgacttcaccaccgcctgc
accgtggtcaactcgcccggcgacgaggcccggctgcagcgggggcccgccggcacggcg
ccgcggccgcgggcggctctgcccgcctcgtccaccatgcacatggggcccgtggtgtcg
aaggcgctgagcgccgcctgcctggtgtgctgcctgtgccgcaaccccgccaactacaag
gacctgggggacctgtgcgggccctactaccccgaggactgcctgcccaagaagaagtcg
cggctgaaggagaaggcgcgggcggagggcgaggaggccggtgcggcggagcgggggccg
aaagggacggagagcagctgggcggccggcggcaagccgccgaggccggagggtgccgcc
gaggctgccaagcagagctcgctccgctccagcccccggggcatgtttcgcaggctgcag
agctgctactgctgtgacgagaggacagagggcgaggaggcggccgaaaagccccggagg
cacgaatgtaacaaagccgagtccccgccgcaggagccgggggcgggcgacacgcaggag
cactggctgcacgaggcctgtgccatatggaccgctggggttttcctggtggcggggaag
ctctacgggctgcaggaggccgtcaaggcggctgccgacgtgaagtgctcgagctgccag
caagcgggagccacggtgggctgctgccagaaggggtgtccccacacctaccactacgcg
tgtgccatcgacacaggttgcttactaaccgaagagagcttctctctgcgatgtcccaaa
cataagaggcagcccgtgtag
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