KEGG   Aythya fuligula (tufted duck): 116495514
Entry
116495514         CDS       T07966                                 
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful03440  Homologous recombination
aful03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aful00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    116495514 (TOP3A)
   03460 Fanconi anemia pathway
    116495514 (TOP3A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aful03032]
    116495514 (TOP3A)
   03400 DNA repair and recombination proteins [BR:aful03400]
    116495514 (TOP3A)
Enzymes [BR:aful01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     116495514 (TOP3A)
DNA replication proteins [BR:aful03032]
 Eukaryotic type
  DNA Topoisomerases
   116495514 (TOP3A)
DNA repair and recombination proteins [BR:aful03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     116495514 (TOP3A)
   FA (Fanconi anemia) pathway
     116495514 (TOP3A)
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_GRF Toprim Zn_ribbon_Top1 Zn_ribbon_GRF_2 zf-C2H2_10
Other DBs
NCBI-GeneID: 116495514
NCBI-ProteinID: XP_032053925
UniProt: A0A6J3DVG4
LinkDB
Position
15:2788078..2798843
AA seq 1020 aa
MSLPARLAASRGVRMLPQPWRLFSRAADEAALRRIRKVLCVAEKNDAARGIADLLSNSRM
RRREGFSKFNKIYEYDCQMFGQNVTVVMTSVSGHLLAHDFKLPFRKWHSCNPLALFEAEI
EKYCPENYVDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARF
SEITLHAVRTACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHEHEDGNVVFNWKRNRLFNHTACLV
LYHMCMEDPVATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMKIAEKLYTQG
FISYPRTETNIFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRSGTKSDQAHPPIH
PTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMILARNYL
EVYPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLSEADLIALMEKHGIGTDATH
AEHIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKSVVLQQQVQKYKQVFIEAVARANKLDQALAQYFGEATEIAEQEEVYPAMPVPIRKC
PQCNNDMVLKTKRNGGFYLSCMGYPACKTAVWFPDFVLDVAKDESICAECGPHPVHRLKF
KFKRGSVPPMMPLEFVGCIGGCDEMLRELLDLKYLNRSTQPAPPASQQANHSQANNSFSR
ASSDSRQARGTTNPAAGHLLSLNTPRAHRPAPAAAPDNGNNAVVCNCGNEATLLTVRKEG
PNQGRQFYKCNANTCNFFLWANEQSEDRSNAAPRGSALPQPFGGRGQAGFQRPGGGGRGP
ELFGGNNSGSGGGTVCNCEQPAVTRTVQKDGPNKGRQFHTCSKPREQQCGFFQWADENAA
PGASGDASWHHFGSSGYSREMGSKMKRPSDLSSGGTAKKPRTCSVCHQPGHTKKTCPHNH
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgagcctccctgcgcggctggctgctagccgtggggtcaggatgctgccccagccctgg
cgcctcttctcgcgggcggcggacgaggcggcgctgcggaggatccgcaaggtcctgtgc
gtggccgagaagaacgatgccgcccggggaatcgcggatctgctctccaacagcaggatg
cggcggagagaggggttttccaagttcaacaagatctacgaatacgactgccagatgttt
ggccagaacgttaccgtggtgatgacatccgtctcgggacacttgctggctcatgatttc
aagctgccctttcgcaaatggcacagctgcaaccctctggctctttttgaagctgaaatc
gagaaatactgtcccgaaaactacgtggatattaagagaacccttgaacgagaagtccag
cagtgccaagctctggtgatctggactgactgtgacagagaaggagagaacatcggcttt
gagatcattcatgtttgcaaagctgtaaagccaaacctccaggttttccgagcccgtttt
tcagagatcacccttcatgctgtcagaacagcctgtgagaacctcacccaaccggatcaa
aaaaccagcgatgctgttgatgtcaggcaggagctggacctcaggataggtgctgctttc
accagattccagacgctgaggctccggaagatcttccctgatattttagcagatcagctg
atcagctatggtagttgccagttcccaaccctggggtttgtagtggaacgctttaaagcc
atccaggccttcgttcctgaagccttctataaaatcaaagtgacacacgaacacgaagat
ggcaatgtggtcttcaactggaagaggaaccggctctttaatcacacagcctgcctggtc
ctttaccacatgtgcatggaggatcctgtagcaactgttgttgaagttgggagcaagcca
aagagcaaatggaggcccctgcccctggacaccgtggaacttgagaaactggcttcccgc
aaactgaaaataaatgcaaaggaaaccatgaaaatagcagaaaaactttatactcaaggg
ttcattagctatccccgaacagagaccaacattttccccaaggagctgaacctctctgcc
ttagtgcaacagcaaacgcaggacccaaactggggggcgtttgcgcagaggattttggat
cagggtgggccaacccctcggagtggaaccaaatcagatcaggctcacccgcccattcac
cccaccaaatacactgctaacctgcagggcaacgagcagagactgtatgaattcatcgtg
cgccattttttggcttgctgctctcaagacgccaaggggcaggaaacgaccgtggagatt
gacattgctaacgagcgattcattgctcaaggactaatgatcctggcccgaaattatctg
gaagtctatccttatgagaagtggagcgacaaggttatcccactgtatcagaaagggtcc
cgcttccagcccactacagtggagatggtggatggggaaaccagccctccattgctgctc
tcagaagcggatctcattgcactcatggagaaacatggcattgggactgacgccactcac
gcagagcacattgagacaatcaagacccggatgtacgtgggcctcacagcagatcagagg
ttcctcccgggccacctgggcatggggctggttgaaggctacgattccatgggctacgag
atgtccaagcctgaccttcgagccgagctggaggctgatctgaagctgatctgcgagggg
aagaaagacaagtccgtagtgttgcagcagcaggtccagaagtacaaacaagtcttcatt
gaggccgtggccagagccaacaagctggaccaggccctggctcagtattttggagaagcc
acagaaattgctgagcaagaggaagtctacccagctatgcctgttcccattcggaaatgc
ccacagtgcaacaacgacatggtcctgaagaccaagaggaacggcgggttctatctcagc
tgcatgggctatccggcttgtaaaactgcagtctggtttcctgatttcgtgctggacgtg
gccaaggatgagagcatctgtgccgagtgtggaccccatcctgttcacaggctgaagttt
aagttcaagagaggcagcgttccacccatgatgcccctggagtttgttggctgcatcggc
ggctgcgatgagatgctgagagagctcctggacctgaagtacttaaacaggtcgacgcag
cctgcgccgccagccagccagcaagccaaccactcgcaggccaacaactccttcagcaga
gcaagcagcgacagcaggcaggcgagggggaccacgaacccggcagcgggacatctcctc
tccttgaataccccgagagcacacaggcctgctcctgcagctgctccagacaacgggaac
aacgcagtggtgtgcaactgcgggaacgaagccacgctgttaacggtgcgcaaagaggga
cccaatcaaggcaggcagttttacaaatgtaacgccaatacctgcaattttttcctctgg
gctaacgagcagtcagaggacagaagcaacgcggctccgcggggctctgcgctgccccag
ccctttgggggaaggggccaagcaggctttcagagaccaggaggaggagggagaggcccg
gagctctttggaggcaacaactccggctcaggaggtggcacagtctgcaattgtgagcag
ccagctgtcacacgcactgtccaaaaagacggtcctaacaaggggcggcagttccacacc
tgctcaaaacccagagagcagcagtgcggcttcttccagtgggctgacgaaaatgcagca
ccaggggcttctggagacgcctcgtggcaccactttgggagcagcgggtactcaagggag
atggggagtaagatgaagagaccaagcgacctctcctcaggaggcactgccaagaaacca
cggacctgtagcgtttgccaccagcctggccacacgaagaaaacctgtcctcacaaccac
tga

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