Aythya fuligula (tufted duck): 116495514
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Entry
116495514 CDS
T07966
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03440
Homologous recombination
aful03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116495514 (TOP3A)
03460 Fanconi anemia pathway
116495514 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aful03032
]
116495514 (TOP3A)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116495514 (TOP3A)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116495514 (TOP3A)
DNA replication proteins [BR:
aful03032
]
Eukaryotic type
DNA Topoisomerases
116495514 (TOP3A)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116495514 (TOP3A)
FA (Fanconi anemia) pathway
116495514 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
116495514
NCBI-ProteinID:
XP_032053925
UniProt:
A0A6J3DVG4
LinkDB
All DBs
Position
15:2788078..2798843
Genome browser
AA seq
1020 aa
AA seq
DB search
MSLPARLAASRGVRMLPQPWRLFSRAADEAALRRIRKVLCVAEKNDAARGIADLLSNSRM
RRREGFSKFNKIYEYDCQMFGQNVTVVMTSVSGHLLAHDFKLPFRKWHSCNPLALFEAEI
EKYCPENYVDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARF
SEITLHAVRTACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHEHEDGNVVFNWKRNRLFNHTACLV
LYHMCMEDPVATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMKIAEKLYTQG
FISYPRTETNIFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRSGTKSDQAHPPIH
PTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMILARNYL
EVYPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLSEADLIALMEKHGIGTDATH
AEHIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKSVVLQQQVQKYKQVFIEAVARANKLDQALAQYFGEATEIAEQEEVYPAMPVPIRKC
PQCNNDMVLKTKRNGGFYLSCMGYPACKTAVWFPDFVLDVAKDESICAECGPHPVHRLKF
KFKRGSVPPMMPLEFVGCIGGCDEMLRELLDLKYLNRSTQPAPPASQQANHSQANNSFSR
ASSDSRQARGTTNPAAGHLLSLNTPRAHRPAPAAAPDNGNNAVVCNCGNEATLLTVRKEG
PNQGRQFYKCNANTCNFFLWANEQSEDRSNAAPRGSALPQPFGGRGQAGFQRPGGGGRGP
ELFGGNNSGSGGGTVCNCEQPAVTRTVQKDGPNKGRQFHTCSKPREQQCGFFQWADENAA
PGASGDASWHHFGSSGYSREMGSKMKRPSDLSSGGTAKKPRTCSVCHQPGHTKKTCPHNH
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccctgcgcggctggctgctagccgtggggtcaggatgctgccccagccctgg
cgcctcttctcgcgggcggcggacgaggcggcgctgcggaggatccgcaaggtcctgtgc
gtggccgagaagaacgatgccgcccggggaatcgcggatctgctctccaacagcaggatg
cggcggagagaggggttttccaagttcaacaagatctacgaatacgactgccagatgttt
ggccagaacgttaccgtggtgatgacatccgtctcgggacacttgctggctcatgatttc
aagctgccctttcgcaaatggcacagctgcaaccctctggctctttttgaagctgaaatc
gagaaatactgtcccgaaaactacgtggatattaagagaacccttgaacgagaagtccag
cagtgccaagctctggtgatctggactgactgtgacagagaaggagagaacatcggcttt
gagatcattcatgtttgcaaagctgtaaagccaaacctccaggttttccgagcccgtttt
tcagagatcacccttcatgctgtcagaacagcctgtgagaacctcacccaaccggatcaa
aaaaccagcgatgctgttgatgtcaggcaggagctggacctcaggataggtgctgctttc
accagattccagacgctgaggctccggaagatcttccctgatattttagcagatcagctg
atcagctatggtagttgccagttcccaaccctggggtttgtagtggaacgctttaaagcc
atccaggccttcgttcctgaagccttctataaaatcaaagtgacacacgaacacgaagat
ggcaatgtggtcttcaactggaagaggaaccggctctttaatcacacagcctgcctggtc
ctttaccacatgtgcatggaggatcctgtagcaactgttgttgaagttgggagcaagcca
aagagcaaatggaggcccctgcccctggacaccgtggaacttgagaaactggcttcccgc
aaactgaaaataaatgcaaaggaaaccatgaaaatagcagaaaaactttatactcaaggg
ttcattagctatccccgaacagagaccaacattttccccaaggagctgaacctctctgcc
ttagtgcaacagcaaacgcaggacccaaactggggggcgtttgcgcagaggattttggat
cagggtgggccaacccctcggagtggaaccaaatcagatcaggctcacccgcccattcac
cccaccaaatacactgctaacctgcagggcaacgagcagagactgtatgaattcatcgtg
cgccattttttggcttgctgctctcaagacgccaaggggcaggaaacgaccgtggagatt
gacattgctaacgagcgattcattgctcaaggactaatgatcctggcccgaaattatctg
gaagtctatccttatgagaagtggagcgacaaggttatcccactgtatcagaaagggtcc
cgcttccagcccactacagtggagatggtggatggggaaaccagccctccattgctgctc
tcagaagcggatctcattgcactcatggagaaacatggcattgggactgacgccactcac
gcagagcacattgagacaatcaagacccggatgtacgtgggcctcacagcagatcagagg
ttcctcccgggccacctgggcatggggctggttgaaggctacgattccatgggctacgag
atgtccaagcctgaccttcgagccgagctggaggctgatctgaagctgatctgcgagggg
aagaaagacaagtccgtagtgttgcagcagcaggtccagaagtacaaacaagtcttcatt
gaggccgtggccagagccaacaagctggaccaggccctggctcagtattttggagaagcc
acagaaattgctgagcaagaggaagtctacccagctatgcctgttcccattcggaaatgc
ccacagtgcaacaacgacatggtcctgaagaccaagaggaacggcgggttctatctcagc
tgcatgggctatccggcttgtaaaactgcagtctggtttcctgatttcgtgctggacgtg
gccaaggatgagagcatctgtgccgagtgtggaccccatcctgttcacaggctgaagttt
aagttcaagagaggcagcgttccacccatgatgcccctggagtttgttggctgcatcggc
ggctgcgatgagatgctgagagagctcctggacctgaagtacttaaacaggtcgacgcag
cctgcgccgccagccagccagcaagccaaccactcgcaggccaacaactccttcagcaga
gcaagcagcgacagcaggcaggcgagggggaccacgaacccggcagcgggacatctcctc
tccttgaataccccgagagcacacaggcctgctcctgcagctgctccagacaacgggaac
aacgcagtggtgtgcaactgcgggaacgaagccacgctgttaacggtgcgcaaagaggga
cccaatcaaggcaggcagttttacaaatgtaacgccaatacctgcaattttttcctctgg
gctaacgagcagtcagaggacagaagcaacgcggctccgcggggctctgcgctgccccag
ccctttgggggaaggggccaagcaggctttcagagaccaggaggaggagggagaggcccg
gagctctttggaggcaacaactccggctcaggaggtggcacagtctgcaattgtgagcag
ccagctgtcacacgcactgtccaaaaagacggtcctaacaaggggcggcagttccacacc
tgctcaaaacccagagagcagcagtgcggcttcttccagtgggctgacgaaaatgcagca
ccaggggcttctggagacgcctcgtggcaccactttgggagcagcgggtactcaagggag
atggggagtaagatgaagagaccaagcgacctctcctcaggaggcactgccaagaaacca
cggacctgtagcgtttgccaccagcctggccacacgaagaaaacctgtcctcacaaccac
tga
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