Aythya fuligula (tufted duck): 116495543
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Entry
116495543 CDS
T07966
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116495543 (CHD6)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116495543 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Chromo
Helicase_C
BRK
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
116495543
NCBI-ProteinID:
XP_032053970
UniProt:
A0A6J3DVK5
LinkDB
All DBs
Position
16:7026411..7095552
Genome browser
AA seq
2739 aa
AA seq
DB search
MIMKIEKRDKQLSSLKVRSRSPMSDASDTWECKAQDPFASSEEQDEVPQQATAAAVGSQH
PEEEPSRAPQKRPSAQNGMQDTGGVGTGVKKKRKKKDQGEQEGGEKAAVEVKPKRRREPK
EPKEPKKAKEPKKQKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPASRARPKKSSKEQ
GPTPVEKKKKGKRKNEIPVDTLELDQDLLSPSVQSPEESVELADSQKRRSGRQVKRRKYN
EDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAH
PGGLTFEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDE
DLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFE
ALQIPPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNC
ILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGS
QISRQMIQQYEMVYRDSQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHR
LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDL
KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL
SKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAA
GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI
DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRS
RRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCV
KHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNA
DWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELD
VLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLS
AEQGVSDGAQDTAERGSMDKEESSGEKMEGLPKQEDIVAAGVGEAGEKRDEPSAAQDGSD
SDRSCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPGNHGYWLQDEMFRRASEMDS
VNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKTFDWTQFRAISRLEKKTDESLEKYFYS
FVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHER
LKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
GIPGSETLCCLYQTNSKLYSSPLYSQVDQTCESLENESESQIKLESIDNTMSQSGGSPPD
ANCETFMSKVRDIMSSNYDESSLPDSLMCMMYDEKACNSEQSSLARDSPSCTDIGSGIAK
LSEGKLEGDEDPSSCDAEAMRETSFLEGLQVGCDQMDSQNGEAEPSPSTPESDPSQSIPA
ELCEALQQKRDLTSPAPEHGAMEGVISMGLYGSSLHNYDIKVPPEQRFINLLQEKGMEAK
SAPSQSHSEEDEEEEEDDDNSEAAADVAEDLSGPRTTAGCDPETNELGGEEQSPGLPTPE
DTCPEAVNGEREALGLGTLEGPGEPGPEGREDHGLEEESILQDLPGQAQSQAFSPPAPPV
GPPGAEPSHAREEDWGQGSEGQAGCREALPPEPPGMKQEECEIRDEEEKAGSSQSQDGLE
KYSEEESKSSTSVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHA
ILKGKWPSSSQQFETQSLIAAPAVASNAGSRNSFAESEAPDPSFNNGVLISQVQKEGFLT
PAFAKDERKHRRLYEFEVERDAKQRSLEQLAATHIHSPIVLNGWREAAVDLSRNSDGSPG
NSSPFPLNTNMPKLGTVNTLQGSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRR
GRRKNVEGMDLIFLKERPLPTRLQDVQEDQPQPPQNTPLPDGPVAATSTPQPVPAAGSQA
EKAVPNKSLLDWLRQQSDYTLDVPGFGTNFSDKPKQRRQRCKDPSKLDINALTGEERVPV
VHKGTGRRLGGATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPESKFNRILTEPVL
RDAGPRRRGRRPRSELIKAPGVVADSSSGMGPLFMNGLIAGMDLVGIQNMRNMQGIPLTG
LVGFPAGFAAVPAGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNPPMTTTCTATAPTSL
TSTTKSGTSNTEKATEDKQSSQDVKKETLSEDKPGPSSFSNQTESAITTSSPVAFNPFLI
PGMSPGLIYPSMFLSPGIGMALPGIQQTRHSEAANLESQKRKRKKAKGESANPEPETVLL
PEKEAANGQNCTEQTPPLSAEKEQDVPAEEELKEVNDTN
NT seq
8220 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatagagaaaagagacaagcagctgtcgagcttaaaagtgcggagccgc
tccccaatgtcggatgcctcggacacctgggagtgcaaggcgcaggacccctttgccagc
agcgaggagcaggacgaggtgccccagcaggcgacggccgcggccgtgggcagccagcac
cccgaggaggagcccagcagagctccccagaagcggccgagcgcccagaacgggatgcag
gacaccgggggtgtaggcacgggggtgaaaaagaaacggaagaaaaaggatcagggagaa
caggaagggggagaaaaagcagctgtggaggtgaaaccaaagaggagaagagagcctaaa
gaaccaaaagagcctaaaaaggccaaggagcccaagaagcagaaggagcccaaacagagg
gaggtggccaagaagccccggaaacctcgggaacccaaagcccccaaggaacctaaagac
aagaagagcggctctgagcctgcctccagagcgagacccaagaagagcagcaaggagcag
gggcctacccctgtggagaagaagaagaaagggaagaggaaaaatgagatcccggtggac
actttggagctggatcaggatctcctgagcccgtccgtgcagagcccggaggagtctgtg
gagctggctgacagccagaaacgccgctctggccggcaggtgaagaggaggaaatacaac
gaggacctggatttcaaggtggtggatgatgacggtgagacaatagccgtgctgggagct
gggagaacctctgcgctctccgcctccactctggcatggcaggcagaggagcctcccgag
gatgatgccaacatcatcgagaagatccttgcttctaggatggtgcagaaggaggctcac
cccggaggcctgacgtttgagatggaggagttctacgtcaagtacaggaacttctcctac
ctgcactgtaagtgggcgactctggaggagctggagaaggatcccaggatatcccagaag
ataaagcgcttccggaacaagcaggctcagatgaagcatatttttacagagcccgatgag
gatttgttcaacccggactacgtggaggtagatcgaattctggaggtggctcacacgaaa
gaccctgacactggggaggaggtgactcactacctggtgaagtggtgctcgctgccctat
gaggaaagcacctgggagctggaggaagatgttgacccagggaagattaaagagtttgaa
gccctccagatccctccagaaatcaagcacatggtaacgtacccagaggagcgcccagca
tccgagtcctggcagaaactggagaagtccagggagtataagaacagcaaccagctgcgg
gaatatcagctggaaggaatgaactggctgctctttaactggtataacaggaagaactgc
atcctggctgatgagatggggctggggaagacaatccagtcaatcaccttcctctcagaa
atcttcctgatgggcatccacggccccttcctcatcatcgcgcccctctccactatcacc
aactgggagagggagttccgcacctggacggagatgaatgccatcgtgtaccacggcagc
cagatcagccggcagatgatccagcagtatgagatggtgtacagggactcacagggcaac
cctctccctgggatcttcaagttccaggtggttatcaccaccttcgagatgatccttgct
gactgcccagagctgaagaagatccagtggcgctgcgtggtcattgacgaggcccatcgg
ctgaagaacaggaactgcaagctgctggaggggctgaagctcatggccctggagcacaag
gtgctgctgacaggcacccccctacagaattcagtggaggagctcttcagcctcctgaat
ttcctggagccacagcagtttccctcagagacggccttcctggaggagtttggggacctg
aagacagaggagcaggtgaagaagctgcagtccatcctgaagcccatgatgttgcgacgg
ctgaaggatgatgtggagaagaacctggcacccaagcaggaaaccatcattgaggtggag
ctgaccaacatccagaagaaatactaccgggcgattctggagaagaacttctccttcctg
tccaagggtgccaaccagcacaacatgcccaacctcatcaacaccatgatggagctgcgg
aagtgctgcaatcacccgtatctcatcaatggggcggaggagaagatcctggaagacttc
cgtaaaacacacagcccggaggcaccagacttccagctgcaggcaatgatccaggcagcc
gggaagctggtgctgatcgataaactccttcccaagctgattgctggggggcacaaggtg
ctcatcttctcccagatggtgcgctgccttgacatcctggaagactatctcattcagagg
cggtacacctatgagcgaattgatgggcgggtgcgaggaaacctgcgccaagctgccatc
gaccgcttctgcaagcccgattcagatcgctttgtctttctcctgtgcacgcgggcaggt
gggctgggcatcaacctgaccgctgctgacacctgcatcatctttgattcagactggaac
ccacagaacgacctgcaggctcaagctcgctgccaccggatcgggcagagcaaggcggtg
aaggtctatcgcctcatcaccaggaactcctacgagcgggagatgtttgacaaggccagc
ctgaaactgggcctggataaggctgtgctgcaggacatcaaccgcaagggcagcaccaac
ggggttcagcagctctcaaagatggaggtggaggacctgctgcggaagggtgcctacggt
gctctcatggatgaggaggatgaaggatccaagttctgcgaggaggacatcgatcagatc
ctccagcgcaggacgcagaccatcacaatccagtctgaggggaagggctccacctttgcc
aaggccagctttgtagcatcaggaaacagaactgacatttccttagatgacccaaacttc
tggcaaaagtgggccaaaatagcagagctcgatacagatgccaagaacgaaaaggagagc
ttggtcattgacaggccccgggtgcggaagcaaaccaaacactacaactccttcgaggag
gacgagctgatggagttctctgagctggacagtgactcggatgagcgacccacgcgctca
cggcgcttcaatgagaagacccggcgctacctgcgggctgagtgcttccgcgtggagaag
aatctgctcatattcggctggggacgttggaaagatatcctgacccatgggcggttcaag
tggcacctgaatgagaaggacatggagatgatttgtcgggccttgctggtctattgcgtc
aaacactacaaaggggatgagaagataaagagttttatctgggatctcatcacgccaacg
aaggacggccagaaccaggctctgcagaatcactcaggtagcttgtcagcgccggtgccc
agaggcaggaaggggaagaaaacgaagaaccagatgctgcttcctgagataaagaacgca
gactggcttgctacctgcaaccctgaggtggtcctgcatgacgacagctacaagaagcac
ctcaaacagcactgcaacaaggtgctgctgcgggtgcggatgctctactacctgaaggcc
gaggtgctgggggaggctgctgacaaagccttcgagggcacccctgccagggagctggat
gtgctgctgccggacattgactacgtggagatccccgtggactggtggaatgctgaggct
gataaatctctgctcattggcgtcttcaagcacggttacgagaggtacaacgccatgcgg
gcagacccagcgctgtgtttcctggagaaggtgggcatgccagatgagaagctgctctct
gcggagcagggcgtcagcgacggggctcaggacactgctgaaaggggcagcatggacaag
gaagaaagcagtggagaaaaaatggaagggctgccaaagcaggaggacatcgtggctgct
ggcgtgggcgaagctggagagaagcgggatgagccgtcggcagcccaggatggctccgac
tcagacagatcctgctggcctgtctcatccgccctcacggccagactgcggcggctcgtc
actgtctaccagcgctgcaaccgcaaagagctgcctccccgcgccgagatgctggtgccc
ggtaaccatggatactggctgcaggacgagatgttcaggagagcctcagagatggactcg
gtgaacaaagaaatgcagaaaaggtggaccaggagggagcaggcagatttctaccgcacc
gtctcctcctttggggtcatctatgatcaggagaaaaagacctttgattggactcagttc
cgagccatctctcgtttggagaagaagacagatgagagcctagagaagtacttctacagc
tttgtggccatgtgcaagaatgtctgtggtctcccgctgtggaaagaggatggtcccccc
gaccctgacatctatgtggagcctattacagaggaacgtgctgcccgaaccttgtaccgc
atcgagcttctgcgaaaggtgcgcgagcaggtgctcaagtgtccacagctccacgagcgg
ctcaagctgtgccggccgagcctctacctgccagtgtggtgggagtgtggcaaacatgat
cgggacctgctaatcggcaccgccaagcatggcctgaatcgcactgactactacatcatg
aatgaccctcagctgtcttttttagatgcgtacagaaactatgcccagcataaaagaaca
gggatcccaggctcagaaaccctgtgctgcctttaccagactaactccaaactctacagt
tcccctctgtacagccaggtggaccaaacctgtgaatccctggagaatgaatctgagagt
cagatcaagctagaaagcattgacaacactatgtcccagtctgggggcagcccgccagat
gcaaactgtgaaacattcatgtccaaggtccgggacatcatgtccagtaactatgatgag
agctctctgccggactcactgatgtgcatgatgtacgacgagaaggcctgtaacagcgag
caaagctcccttgcccgggacagcccaagttgcacagatattggaagcggtattgctaaa
ctctctgagggcaagctagagggggacgaggatccgtccagctgtgatgcagaggccatg
agagagacttccttcctggagggattgcaggttggctgtgaccaaatggacagtcagaac
ggagaagctgagccttcgccttctactcctgaaagtgacccctcacagagcatcccagca
gagctctgtgaagcgttgcagcagaagagagacctcaccagccctgcacctgagcacggt
gccatggaaggagtcataagcatggggctgtatggttccagtcttcataactatgacata
aaggttcctcctgagcagaggttcattaatctgctgcaggagaaaggaatggaagcaaag
tcagccccgagtcagagccacagtgaggaagatgaggaggaggaagaggacgatgataac
tctgaggcagcagcagatgttgcagaagacttgagtggtccaaggaccacagctggttgt
gaccctgagactaacgaactggggggcgaggagcagagccctggcctccccacacccgag
gacacttgccccgaagccgtgaatggcgagagagaggccctggggctagggacactcgaa
ggccctggggaacctgggccagagggaagggaggaccacggcctggaggaggagagcatc
ctgcaggacttgcctggccaggctcagagccaggctttcagcccgcctgcacctccagtg
ggacccccaggggcagaaccctcccatgccagggaggaggactggggacaagggtccgag
gggcaggcaggctgtagagaagccctgccccctgagcccccggggatgaagcaagaagag
tgtgagatcagagatgaggaggagaaagctggcagcagccagagtcaagatggtctggag
aagtactcggaggaagagagcaagagttcgacttctgtcctgcctggggagattgatgat
cttcaggatgcccgggcaccgaccatagcccagcttttgcaggaaaagacactttactcc
ttctctgaatggcctaaggaccgtgtgatcatcaatcgcattgacaacatctgccatgcc
atcctgaagggcaagtggccttcctctagccagcagtttgagacacagagcctgatagca
gccccagcagtagccagcaatgccggcagcaggaacagctttgcagagtcagaagcccct
gatcccagcttcaacaacggagtgttaatctcccaggtacaaaaggaaggcttcctgact
cctgcctttgcaaaggatgagcggaaacacaggaggctgtacgaattcgaggtggagaga
gatgccaaacagaggagcttggagcagttagcagcaacccacattcattctcccattgtg
ctgaacggctggcgtgaggcagctgtggacttgtccagaaactctgatgggtccccaggg
aactcctctccgttccccctgaatacaaacatgcccaaactggggactgtgaacaccctc
caaggctccctgggcatggacttatctggcattctccaggcagggttaatccatcctgtc
acaggacaaattgtaaatggcagcctccgaagagatgatgctgccatgaggaggagacgg
ggcaggagaaaaaatgtagaagggatggacctcatcttcctgaaggagaggcctcttcca
acaaggctgcaggacgttcaggaagatcagccgcagcctccccagaacacccccctccca
gatgggccggttgctgctacctcaactccacagccagtcccagctgcaggcagccaagca
gagaaggctgtcccaaataagagtctccttgactggctccgtcagcaatctgactacaca
ctcgacgttcctggcttcggcacaaatttttcagacaagcccaagcagaggaggcaacgc
tgcaaggaccccagcaaactggatattaatgcactcacgggagaggagcgggtgccagtg
gtacataagggtaccggacggaggttagggggagccacggcaccagcattgaaggaattg
ccaaggtggcttgatgcaaacttggagtatgctgttgcagctgactgggctgacattgtt
aagctttcaggctacttaccagaaagcaaattcaaccgtatcctaacggagcctgtgctc
cgagatgcagggccccgtcggagggggagaaggcccagaagtgaactcattaaagcccct
ggtgttgtagcagattcctcttctggaatgggaccattattcatgaatggactgattgct
ggaatggatctggtaggaattcagaacatgagaaacatgcaagggatccccctgactggg
ctggttgggtttcctgctggatttgcagctgtgcctgctggtgaggatgtgaaaagcacc
ctaagtatgttgcctatgatgctgccaggcatggctactgtaccacagatgtttggtgtt
ggaggacttctgaacccaccgatgacaactacttgtactgcgactgctccaacttcatta
acaagcacaacaaaaagtggtacatcaaacacagagaaagctactgaggataaacagagt
agccaggatgtgaaaaaagaaactctctctgaagataagcctggtcctagttcgttttct
aatcagacagaatctgcaataactaccagtagtcctgtagcttttaacccatttcttatc
ccagggatgtcacctggactgatctatccgtcaatgtttctttcccctggcattggcatg
gcattgccaggcatacagcaaaccagacattcggaggcagcaaacctggagagccagaag
cggaagagaaagaaagctaaaggggaatcagcaaatccagaaccagaaactgtcttgctg
cctgaaaaagaagctgcaaacggtcaaaactgtacagagcaaacaccacctttatcagca
gagaaagagcaggatgtaccagcagaggaggagctcaaagaagttaatgataccaattag
DBGET
integrated database retrieval system
