Aythya fuligula (tufted duck): 116495550
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Entry
116495550 CDS
T07966
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aful03041
]
116495550 (RBM39)
Spliceosome [BR:
aful03041
]
Common components
Common spliceosomal components
General mRNP proteins
116495550 (RBM39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
116495550
NCBI-ProteinID:
XP_032053984
UniProt:
A0A6J3DTH2
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Position
16:complement(6692221..6723887)
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AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccacgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagtcatgacagaaagaggagcagaagcaaggaacgcaagcggagccgagac
cgggaaagaaaaaagagcagaagccgggaaaggaagcggagcagaagcaaagaacgcaga
cgcagccgttctagaagtagagaccgcagattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgaagatccagaagcaaaagtcctttcagaaaagacaagagtcctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtattctgcatgcagcta
gctgcgagaattcgaccaagagatttggaagaatttttctctacagtagggaaggttcgt
gatgtgcgaatgatttctgatagaaattccaggcgttcaaagggaattgcttatgtagaa
tttgttgatgttagttcagtacctctggcaataggactaactggacagagagtcttgggt
gtaccaattattgtacaagcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatttgcagaagggcagcgctggtcctatgaggctctacgtaggatcgttacacttcaac
ataactgaagatatgcttcgaggaatttttgagccatttggcaggatcgaaagcattcag
ctgatgatggatagtgaaactggacgttcaaaaggatatggatttattacgttctcagac
tctgagtgtgccaaaaaagctttggaacaactcaatggatttgagctggctggtaggcca
atgaaagttgggcacgtaactgagcgcactgatgcttccagtgctagctcatttttggac
agtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagttgatg
gcaaggcttgcagagggtactggtttgcagattcccccagctgcacagcaggctctgcag
atgagtggatcattggcatttggagctgttgcagatttgcaaacaagactttctcagcag
aatgaagttttggctgcagctgcttctgtacaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggatacagaaattaaagat
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctatgtagacaagaat
tcagctcagggcaatgtgtatgtcaaatgtccttcaattgctgctgccattgcagctgta
aatgcattgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
ccaacataccatagccttttcccagattctatgactgcaacccaactactggttcctgtt
cgacgatga
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