Aythya fuligula (tufted duck): 116495991
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Entry
116495991 CDS
T07966
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03030
DNA replication
aful03410
Base excision repair
aful03420
Nucleotide excision repair
aful03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116495991
03410 Base excision repair
116495991
03420 Nucleotide excision repair
116495991
03430 Mismatch repair
116495991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aful03032
]
116495991
03036 Chromosome and associated proteins [BR:
aful03036
]
116495991
03400 DNA repair and recombination proteins [BR:
aful03400
]
116495991
DNA replication proteins [BR:
aful03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116495991
DNA Replication Termination Factors
ELG1-RFC complex
116495991
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116495991
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116495991
Check point factors
HRAD17(Rad24)-RFC complex
116495991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_24
AAA_16
AAA_22
AAA_11
AAA_assoc_2
AAA_14
DEAD
RuvB_N
DUF815
AAA_5
ResIII
AAA_30
DNAX_ATPase_lid
AAA_19
TIP49
PhoH
AAA_7
ATPase_2
TniB
nSTAND3
AAA_25
Mg_chelatase
Thioredoxin_6
Gp44_lid
AAA_3
bpMoxR
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
116495991
NCBI-ProteinID:
XP_032054671
UniProt:
A0A6J3DTF5
LinkDB
All DBs
Position
17:complement(5643854..5646695)
Genome browser
AA seq
329 aa
AA seq
DB search
MAAAGGRNLPWVEKYRPRELSELVSHRDILSTIQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYRDREFSSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQ
EEGVDVSEDGMKALVTLSSGDMRRALNILQSTAMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKITELKTLKGLALQDILTEIHLFVHRVDFPPSVRIQLLIKMADIEYR
LAAGTSEKVQLSSLVAAFQVTRDLIVAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggcgggaggaacctgccctgggtggagaagtaccggccgagggagctc
tccgagctggtgtcgcaccgggacatcctcagcaccatccagcggttcatcagcgaggac
cggctgccccacctcctcctctatggcccccccggcaccggcaagacctccaccatcctg
gcgtgtgcccggcagctctaccgggatcgagagttcagctccatggtgctggagctgaac
gcctcggatgaccggggaatcgacatcgtcagggggcccatcctgagcttcgccagcacc
aggaccatcttcaagaaaggcttcaagctcgtcatcctggacgaagccgatgccatgacc
caggacgctcagaacgccctgaggcgagtgatcgagaagttcaccgaaaacacccgcttc
tgcctcatctgcaactacctctccaagatcatccccgcgctgcagtcccgctgcacccga
ttccgcttcgggcccctcaccccggagctgatggtgccccggctgcagcacgtcatacag
gaggagggggtggatgtgagcgaggacgggatgaaggcgctggtgaccctctcgagcggc
gacatgcgccgagccctgaacatcctgcagagcaccgccatggccttcgggaaggtgacg
gaggagaacgtctacacctgcacggggcatcccctcaagtccgacatcgccaacatcctc
gactggatgctcaaccaggacttctccaccgcctatcgcaaaatcaccgagctgaagacg
ctgaagggcttggccctgcaggacatcctgaccgagatccacctgtttgtgcacagagtc
gatttcccaccctcggtccgcatccagctgctgatcaagatggcagacatcgagtaccgg
ctggctgcaggcacgagcgagaaggttcagctgagctccctcgtcgcggctttccaagtc
accagggacctgatcgtggccgaagcctga
DBGET
integrated database retrieval system