Aythya fuligula (tufted duck): 116496052
Help
Entry
116496052 CDS
T07966
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aful03000
]
116496052 (HNF1A)
Transcription factors [BR:
aful03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116496052 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
KPBB_C
Motif
Other DBs
NCBI-GeneID:
116496052
NCBI-ProteinID:
XP_032054808
UniProt:
A0A6J3DZT8
LinkDB
All DBs
Position
17:8178422..8193304
Genome browser
AA seq
641 aa
AA seq
DB search
MVSKLSHLQVELLGALLESGLTKETLIKALSEVEPYMLQSESQRAINALQTEKGESCPEI
PNLPNGMGESRLSEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQF
THAGQGILTEEPMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECN
RAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTFSGPQPTPAPPL
TPHNSSSLQPPSALSPSKVHGVRYNQQPASEAESSSSNHHGNNSMVTTQTILHQVSPPGL
EPSQNLLSTDTKLISASGGTLPPVSTLTALHSLEQNPHALSQQTQNLIMASLPGVMAIGA
GETSSLTPAFTNTGASTLVIGLASTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPL
MQQVQSHINQSPFMATMAQIQNPHALYGPKSEVAQYTHTGLLPQTMVITDTANLSALTNL
TPTKQVTASSTSAFTPDSETHTESGMHTPVSQAPTIHLQNQDTTIQHLQPGPRLTSSPAV
SSSSLVLYQSSDSTNSHSQLLPSSHNVIETFISTQMASSTQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgaagctgagtcatcttcaagtggagctgctgggagcgctgctggagtcgggg
ctaaccaaggagaccctgattaaggcactgagcgaagtggaaccctacatgctccagagt
gaaagtcagcgcgccatcaatgccctccagacagagaaaggggaatcttgccccgaaatc
cccaatctccccaatggaatgggggaatccaggttatcggaagatgaaacctctgatgac
ggggaggaatttacccctccgataatgaaggagctggaaaacttgagccctgaggaggct
gctcaccagaaggctgtggtggaaagactattacaagaggatccctggcgggtagcaaag
atggtgaaatcctacctccagcagcacaacatccctcagcgcgaggtggtggacactact
ggtctgaaccaatctcacctctcacagcacctcaacaagggcactcccatgaagacccaa
aaaagggcagccctctacacctggtacgtccgcaagcagcgagaggtggcccagcaattc
acacatgctggccagggtatcttgacagaggaacccatgggagacgatctgcccaccaag
aagggacgaagaaaccgctttaagtggggccctgcctcacaacagatcctgttccaagcc
tacgagagacagaaaaaccccagcaaagaagagagggaggcactggtggaggagtgcaac
agagcagagtgtattcagagaggagtttccccatcccaggcccagggcctgggctcgaac
ctggtgaccgaggtgcgagtttacaactggtttgccaaccgcaggaaggaggaggccttc
cggcacaagctggccatggacaccttcagcgggccacagcccacgcctgctcccccccta
actcctcacaactcgtcctccctccagccaccatctgctctctcacccagcaaagttcat
ggagtgaggtacaaccagcagccagccagcgaggctgagtcctccagcagcaaccaccac
gggaacaactcgatggtgaccacccaaaccatcctgcatcaggtttctccccctgggctg
gagcccagccagaacctactgagcacagacactaagctgatctcggcttctggaggaact
ctcccccctgtcagcaccctgaccgccttgcacagcctggagcaaaatccacacgcactg
agccagcaaactcagaacctgatcatggcctcgctgcccggtgttatggcgatcggagct
ggcgagacctcatccctaacaccagcgttcaccaacacgggtgcctccaccctcgtgata
ggcctggcttcaacccagccccagagcgttcccgtgataaacagcatggggagcagcctc
accaccctgcagcccgtccagttctcccagcagctgcacccgtcctaccagcagcccctc
atgcagcaggtccagagccacataaaccagagccccttcatggctaccatggcccagata
cagaaccctcacgctctctacggccccaagtccgaggtggcccagtacacacacacaggc
ctcttaccacagaccatggtgataacagacaccgccaacctcagcgccctgactaacctg
acaccaactaaacaggtaacagcctctagcacatctgcattcacacctgactcagaaacc
cacacagagtctgggatgcacacgccggtatcgcaggctccgacgatacatttgcagaac
caagacacaaccatccagcacctgcagcccggccctcgcctcacctcaagccctgctgtg
tcctccagcagcctggtgctgtaccagagctctgactccaccaacagccacagtcagctg
ctgccatcctctcacaacgtcatcgagaccttcatctccacgcagatggcctcctccact
cagtaa
DBGET
integrated database retrieval system
