Aythya fuligula (tufted duck): 116496163
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Entry
116496163 CDS
T07966
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03030
DNA replication
aful03410
Base excision repair
aful03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116496163 (POLE)
03410 Base excision repair
116496163 (POLE)
03420 Nucleotide excision repair
116496163 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aful03032
]
116496163 (POLE)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116496163 (POLE)
Enzymes [BR:
aful01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116496163 (POLE)
DNA replication proteins [BR:
aful03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
116496163 (POLE)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
116496163 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
116496163
NCBI-ProteinID:
XP_032054965
UniProt:
A0A6J3DYH0
LinkDB
All DBs
Position
17:complement(4154310..4188653)
Genome browser
AA seq
2307 aa
AA seq
DB search
MREQSMNGSSAFAQQQILLETVPRDMENKEVAAAPGVAADGGASRRDDGPALSALKRLER
SQRTDRLDALFGFERPSEPGERTGWLINMHPTEVLDEDRRPVSAVDYYFVQEDGSRFKVA
LPYRPYFYIATQQGCEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSF
NTVDDLVKVRKEISPAVRKNRERDQANDVYTSMLSSALAGGSLTTEEEGASKKIANQMDN
IVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSTLPPEITRRDDLVERPDPVVLAFDIE
TTKLPLKFPDAETDQIMMVSYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNE
PDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEY
KASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLAT
YSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFP
NKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKT
LRHAIEEEEGLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILT
NRLQPSAIVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPP
LYPDGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDT
VRAFRDRRYEFKGLHKVWKKKLAAAVEMGDASEVKRCKNMEILYDSLQLAHKCILNSFYG
YVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFV
IKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELEDPASLTYVTRSENSIFFEVDGPY
LAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGT
TLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTA
KRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPTVRKHYLRKWLKSP
SLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDV
YKQKKINELFTSEGKRQVLANQPQEGTPSSQISDIEDFGVAKSLQPSVPIANKRKRVPLA
EESQQMSQSLELSQSWREILGPPPPMGTSKEQHLVWLRYHKKKWELQARQRQERQKRRRL
EDGSVAAGGGVVRDVLSKGLSSYLRRTARSILDLPWQIVQIAETSQPGLFRLWAVIGSDL
HCIKLSIPRVFYVNQRIAKPEEGAVYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEIN
ADLSAPDIEGVYETQVPLLFRALIQLGCVCMVSRQLVRHLTGREAETFDIEHLEMRSLAQ
FTYLEPGSIRHIYLYHSSQGTKALFGLFIPSQRKAAVFVLDTVRSNQMPNLTNMFSAERS
ALLEKVGEDLLPPDKHIFEVRAETDPKTIYRAIQRLLLGYKDERRGPTLIAVQSNWDLKR
LASGIPIIEEFPLVPVRVTDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHI
PIGNLPDDISTFGSDLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERALVE
INNPGCYSTVCLELDIQSLAVNTVLQSHHVNDMEGGSSMSVSFDVIQQASLEDMVTGNQA
ANIPASYDETALCSNTFRILKSMVVSWVKEITQYHNIYADNQVIHFYRWLRSPSSLLYDP
ALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIH
SKEIFHSLTISFSRCWEFLLWMDPANYGGIKGKVHSRIHYGEKDTSKRQVLEEEDSEEEE
EVGEEEEEGESNVEELLENSWNIVQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELQRNA
PGSTPVKRRGTSQVSQEAPCETGAMPGMITFSQDYVANELTQSFFTITQKIKKKMAGSRN
ATEPSDLFPVLPGSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFS
DEAQFRDPCRSYVLPEVICRNCNFCRDLDLCKDPALSQDGSVLPSWVCSNCEAQYDSDSI
EMALVEALQKKLMAFMLQDLVCNKCHGVKDTHMPVYCSCAGEFALTISSQVFMEHITIFQ
NIARHYSMAYLLETIEWLLRTNPQLQQ
NT seq
6924 nt
NT seq
+upstream
nt +downstream
nt
atgagggaacaaagtatgaatggcagctctgcatttgcccaacagcagatcctcctggaa
actgtgccaagggacatggaaaacaaagaggtggctgcagccccgggggtggcggctgac
ggtggcgcgtctcgcagggacgatggccccgcgctgtccgccctcaagcgcctggagcgg
tcgcagcgcacggaccggctggatgctctgttcggcttcgagcggccctcggagcccggc
gagaggacgggctggctcatcaatatgcatccgacagaggtgctggatgaggaccggcgg
ccggtgagcgctgtggattactactttgtgcaggaggatgggagccgcttcaaggtggct
ttgccctacagaccttacttctacatcgccacccagcagggctgtgagcgagaagtgtcc
tccttcctttctaagaagttccaagggaaaattgcaaagctggaaactgtccccaaagaa
gacttggatctgccaaatcacttggtgggtctgaagcggaactacatcaagctgtccttc
aacacagtggatgacttggtgaaggtgcgaaaagagatttctcctgctgtaaggaaaaac
agagagcgagaccaggcgaatgatgtctatacgtccatgctgtccagtgctctggctgga
ggcagcctgaccacagaggaagaaggagcctcaaaaaagattgccaaccaaatggacaac
attgtggatatgcgggagtacgatgtgccctaccatgtccgcctctccattgacctgaag
atccatgtggctcactggtacaacgtgcgataccggggcagcacccttcctccagaaatc
acccgccgagatgacctcgtggagcgaccagatcctgttgttcttgcctttgacattgaa
actaccaaactccctttgaagtttcctgatgcagagacagaccagatcatgatggtctcc
tacatgattgatgggcagggctacctgatcacaaacagggagattgtctccgaggatatt
gaagactttgagtttactcccaagccggagtatgagggaccattttgtgtctttaatgaa
ccagatgaagctcatttaatccagaggtggtttgaacatgtccaggagaccaaacctact
atcattgtcacatacaatggagacttctttgactggccctttgtggaagcaagagcagca
gctcatggaatcaatatgtatcaggaaattggatttcagaaggacagccagggagagtac
aaagcatcacagtgcatccacatggactgtctaaggtgggtgaagagagacagttacctc
ccagtgggaagtcacaacctgaaagcagcagctaaagcaaagctgggctatgatccagtg
gagctggaccctgaagagatgtgccggatggctacagaggagcctcagaccctggccact
tattcagtgtccgacgcagttgctacctattacatgtatatgaagtatgtgcatcctttc
atttttgcgttgtgcaccatcattcccatggagcctgatgaggtgttgcggaaaggctct
gggacactgtgtgaggcactgctgatggttcaagcgtatcacgccaacatcatcttcccc
aataagcaggagcaggaatttaacaaactcacagaggacgggcacgtgctggactcggag
acgtatgtaggaggccatgtggaagcactggaatcgggagtttttcgcagtgacatcccc
tgccgcttcaagatgaatcctgctgcctttgacttcttggtgcagcacgtggagaagaca
ctccggcatgctattgaggaggaggagggtttgccattggatcaagtcaccaacttccag
gaggtttgtgatgaaatcaaagtcaaactgaattccctgaaggatgtccctaacagaatt
gagtgtccccttatctaccatttagacgtgggggccatgtaccccaacatcattctgacc
aacagattgcagccctcagcaatagtagacgaggccacgtgtgctgcctgtgacttcaac
aagccgggtgccaactgtcagcgccgaatgacgtggcagtggagaggagaattcatgcct
gcaagccgcagcgagtaccaccgcatccagcagcagctggaatctgagaagttccctccc
ctgtaccccgatggagcaccccgggccttccacgagctctcccgtgaagaacaggccaag
tatgagaagaagcgactggcagattattgccggaaggcctataagaagatccacgtcacc
aaggtggaggagcgggtcaccaccatctgccagcgagagaattctttctatgtggacacc
gtgcgagccttcagggaccgtcgctacgagttcaaggggctgcacaaggtgtggaagaag
aagctggctgcagctgtggagatgggagatgcctctgaagtgaaacgctgcaagaacatg
gagatcctctacgattcactgcagctggcacacaagtgcatcctcaattctttctatggc
tatgtcatgcggaaaggagctcgctggtactccatggaaatggctgggattgtctgcttc
actggagcaaatatcatcacgcaggccagggaactgattgagcagattgggagacctctg
gaactggatacagatgggatctggtgtgtccttcctaacagcttcccagaaaactttgtc
atcaagtcaaccaatgccaagaagccaaaggtgacaatctcctacccaggtgctatgctg
aacatcttggtgaaggaaggcttcacaaacgatcagtaccaggaactggaggacccagcc
tctctcacctatgtcacacgctcagagaacagcatcttttttgaagtggatggaccatac
ctggccatgatcctcccagcttccaaggaggagggcaagaagctgaagaaaaggtacgcg
gtgttcaacgaggatgggtccctggctgagctgaagggattcgaggtgaagcgacgaggt
gagctgcagcttgtgaagatcttccagtcctctgtgtttgaggccttcctgaaaggcacc
accctggaggaggtctacgcttctgtggccaaggtggctgactactggctagacgtgctg
tacagcaaggctgccaacatgcctgattcagagctgtttgagctgatctcggagaaccgt
tccatgtctcgcaagctggaggactacggggagcagaaatccacctccatcagcactgcc
aagcgcctggcagaattcctgggagaccagatggtgaaggatgcagggctgagctgccgg
ttcatcatttccaagaaaccagaagggtctccagtcactgagagggccatcccccttgcc
atcttccaagcagagcccaccgtacggaagcattacctccggaaatggctgaagagcccc
tcactacaggacttcaacatccgtgcaatcctggactgggattactacattgaaagactg
ggcagcaccattcagaaaatcattactattcctgcagctctgcagcaggtaaagaacccg
gtgccacgggtccggcaccctgactggctgcataagaaactcctggagaagaacgatgtg
tacaaacaaaaaaaaatcaatgaactcttcacttctgaaggcaagagacaggtccttgcc
aaccagccccaggagggaacacccagctcacagatcagtgacatagaggattttggggtt
gccaagagccttcagccatcagttcccatcgcaaataaacggaagcgagtccctctggca
gaggaaagccaacagatgtcccagagcctggagctatcccagtcctggcgagagatcctg
ggcccacctcctcccatgggaaccagcaaggagcagcacctggtgtggctgcgctaccac
aagaagaagtgggagctgcaggcccgacagcggcaggagcggcagaagcggcggcggctg
gaggatggcagtgtggccgcaggaggaggagtggtccgcgatgtgctctccaaagggctg
agcagctacctgcgtaggacagcacggagcatcctggacttaccctggcagattgtgcag
attgctgagaccagccagccaggcctgttcaggctgtgggcagtgatcgggagtgacctg
cactgcatcaagctgagcatccccagggtgttctacgtcaaccagcgcattgcaaaacca
gaggagggagcagtctacaggaaggtaaacaggatcctgccccgctcaaatttggtttac
aacctctacgagtactctgtccctgaagacatgtaccaagagcatatcaacgaaatcaat
gctgacctctctgctccagacatcgagggagtatatgagactcaggtgccactgctcttc
cgagccctcatccaactgggctgcgtgtgcatggtcagcaggcagctggtcaggcacctg
acggggcgagaggccgagacctttgacattgagcacctggagatgcgctcgctggcccag
ttcacctacctggagccaggaagtattcgccatatctacctctaccacagctcccagggc
accaaggctctctttggccttttcatcccctcgcagcgcaaagccgccgtgtttgtgctg
gacacggttcgcagcaaccagatgccaaacctcaccaacatgttctctgcggagcgcagc
gcactgctggaaaaggtgggtgaggatctgctgcctccggacaagcacatctttgaagtg
cgtgctgagaccgaccccaagaccatctacagagccatccagcggctgctgctgggctac
aaggatgagcgccggggccccacactgattgctgtgcagtctaactgggacctgaaacgt
ctggcaagtgggattcccatcatcgaggagttcccgttggtccccgtccgagtgacggac
gacatcagctactcagtcctggactggcagcgccacgcagcccgccgcatgatccgccac
tacctcaacctggatacgtgcctgtcccaggcttttgaaatgagcaggtattaccacatt
ccaattgggaatctccctgacgacatctccacctttggctctgacctgtttttctcgcgc
cacctccgccgtcacaaccatttgctgtggctctcacccacggctcgcccagatctgggg
ggcaaggaggctgatgacaaccgcctggtcatggagtttgatgagagagccttggtggag
atcaacaaccccggctgctactccacagtatgtctggagctggacatccagagcctggct
gtaaacacagtgttgcaatctcatcacgtaaatgacatggaaggaggttccagcatgagc
gtcagctttgatgtgattcagcaggcatccctggaagacatggtgacagggaaccaagct
gccaacatcccagccagctatgatgaaactgccctctgctccaacacattcaggattttg
aagagtatggtggtgagctgggtgaaggagatcacgcagtaccacaacatctacgcggac
aaccaggtcattcatttttaccgctggcttcgctctccttcttcgctgctctacgatccc
gcgttgcaccggactctgcacaacatgatgaagaagcttttcctccagttagtggctgag
ttcaagcggcttggctcttccgtggtttacgccaacttcaaccggatcatcctgtgcacc
aagaagcggcgtattgaggatgcaatcagctacatggagtacattatcaatagcatccac
tcaaaggagatcttccactcccttactatttctttctcccgctgctgggagttcctgctc
tggatggatccagcaaattatggaggcatcaagggaaaagtgcattctcgcatccactac
ggggagaaggataccagcaagaggcaagtgttggaggaggaagacagcgaggaagaggag
gaggtgggggaagaagaggaggaaggggaatccaacgtggaggagctgctggagaacagc
tggaatatcgtgcagttcctgccccaggctgcctcctgccagagctacttcctaatgatt
gtgtcagcctacatcgtggctgtgtaccacagcatgaaggaggagctgcagcgcaatgcc
cctgggagcactcctgtcaagaggagaggcaccagccaagtgtcccaagaggcaccgtgt
gagacaggggccatgcctggcatgatcacgttctcacaggattacgtggccaatgagctc
acccagagcttcttcaccatcacccagaagatcaagaagaagatggcaggttctcgtaat
gccactgagccttcagacttgttcccagtgctgcctggctcctacttgccgctcaacaac
ccggctctagagttcatcaaatatgtttgcaaggtgctgtctctggatgccaacattacc
aaccaggtgaacaaactgcgcagggacctgctgcgcctcatcgaggtgggcgagttctcg
gatgaagcccagtttcgggacccttgccgctcctacgtgctccctgaagtcatctgcagg
aactgcaacttctgcagggacctagacctgtgcaaggaccctgctctctcccaggatgga
tcagtgctgcccagctgggtctgctccaactgtgaggcgcagtatgactctgactctatt
gaaatggcgttggtggaagccctgcagaagaagctgatggccttcatgctgcaggacctg
gtgtgcaacaagtgtcatggtgtgaaggacacacacatgcccgtgtactgcagctgtgct
ggagagtttgccctcaccatctcctcccaggtcttcatggagcacatcaccatcttccag
aacatcgctcggcactacagcatggcctatctcctggaaaccatcgagtggctgctgcgt
acaaacccccagctccagcaatga
DBGET
integrated database retrieval system
