Aythya fuligula (tufted duck): 116496298
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Entry
116496298 CDS
T07966
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04142
Lysosome
aful04144
Endocytosis
aful05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116496298 (CLTCL1)
04142 Lysosome
116496298 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116496298 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116496298 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116496298 (CLTCL1)
Membrane trafficking [BR:
aful04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116496298 (CLTCL1)
Exosome [BR:
aful04147
]
Exosomal proteins
Proteins found in most exosomes
116496298 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
116496298
NCBI-ProteinID:
XP_032055167
UniProt:
A0A6J3DZT3
LinkDB
All DBs
Position
17:complement(9699129..9736358)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTASHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRISPDQGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYSAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccattcgcttccaggagcatttccagctccaaaatttgggcatt
aacccagcaaacattggattcagcaccctaacaatggaatctgacaaattcatctgcatc
agggagaaagtgggagagcaggcgcaagtagtgataattgacatgagcgacccaacaaca
cccattagacgtccaatttctgctgaaagtgccatcatgaatccagcctctaaagtaatt
gcgctgaaagctgggaaaacactacagatctttaacattgagatgaaaagtaaaatgaaa
gcccacaccatggcggaggaggtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtaacagagacagcagtctaccactggagcatggagggagaatctcaaccccaaaag
atgtttgacaggcatgctagtcttgcaggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgttgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtactcagttgatagaaaagtctcccaacctattgagggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttccaccctcttttgttttgctgtg
aggagtcctgcagggggcaagcttcacataattgaagtgggtcagccagctactgggaat
cagccatttgttaagaaagctgttgatgtgtttttcccacctgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcatggcgttatctacctgatcacgaagtatggt
tatattcacatgtatgacttggagtctggagtttgcatctacatgaaccgtattagtgct
gacactatttttgtcacagcttctcatgaacctacctcaggcattattggtgtcaacaaa
aaaggacaggtgctttccgtatgtgttgaggaagacaacatagtgaactatgctacaaat
gttctccagaatcctgatctgggtctgcgcatggctatacgtagtaatctagctggcgca
gaggaattatttgccagaaagttcaacacattgtttgctcaaggaagctatgcggatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaatcaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccctgctccagtactttgggata
ttgcttgaccagggacagctgaacaagtttgagtctctagagctctgtcgccctgttctg
cagcaaggccgcaagcagcttctggagaagtggctgaaggaagacaagctggagtgctca
gaggagttgggagacttggtgaagacagctgaccctacccttgcgctcagtgtctatctt
cgtgccaatgtgccaaacaaagtgatacagtgctttgctgaaactggtcaattccagaaa
atagtgctgtatgctaaaaaggttggctataccccagactggatcttcttgctgagaagc
gtgatgagaatcagccctgatcaaggcctgcagttctctcagatgctggtacaggatgag
gagccactggctaacattaaccagattgtggatgtgttcatggagaacagtcttattcag
caatgcacgtccttcctgttggatgctttgaaaaataaccgccctgcagaaggccacctt
cagactcggctgctggaaatgaatttaattcatgccccacaggttgcagatgccatcctt
ggaaaccaaatgtttacacactatgatcgtgctcatattgcccagctgtgtgaaaaggca
ggcttgctccagcgagctttggaacactacaccgatctctatgatattaaacgtgctgtt
gttcatactcatctcttgaatcccgagtggcttgtgaacttctttggctctctctctgtt
gaagactcggtggagtgcttgcgtgctatgctgtcagccaacattaggcaaaatctacag
ctttgtgtgcaggttgcttctaagtaccatgaacagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
ttcagccaggatccagatgttcacttcaagtacatccaggcagcttgcaagacaggtcag
ataaaggaagtagaaagaatctgccgtgaaagtaactgctataacccagaacgggtgaag
aactttctgaaggaggcaaagctgacagaccaacttcctctgatcattgtctgtgaccga
ttcgactttgttcatgacctggtgctctacttatatcgcaataacctgcagaagtatata
gagatctatgtacagaaggtgaatcccagccgtataccagcagtggttggagggcttctt
gatgtggattgttctgaagatgtaattaagaacttgatcatggtggttagagggcagttc
tcaacagatgagttggtggctgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggctcgaatcaaggattcatgaaggctgtgaagaacctgcgactcataatgccttggcc
aaaatctacattgatagtaataataatccagagcggttccttcgcgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgca
tatgagagggggcaatgtgatctggaactcataaaggtctgcaatgagaactcactgttt
aagagtgaggctcgctatctagtacgcaggaaggaccctgaactctgggcaaatgtttta
gaagaaaacaacccattcaggcggcagcttattgaccaggttgtccaaacagctttatca
gagacgcaggatccagaggaggtttctgtcactgtgaaagctttcatgactgcagacctg
cctaatgaattaattgagttattggaaaaaattgtcttggataattctgtattcagcgaa
cacaggaatctccagaatctgctgatcctgactgccatcaaggctgaccgcacccgcgtg
atggagtacattaatcgactggataactatgatgccccagatattgcaaacattgccatc
agtaatgaactatatgaagaagcctttgctatattcagaaaatttgatgttaatacttca
gcaatccaggtactgattgaacacattggcaatttagaccgtgcttatgaatttgcagag
agatgtaatgaaccagcagtatggagccagctagccagagcacagctgcagaaggacttg
gtgaaggaagccattgactcctacataaaggcagatgatccatctgcctacatggaagtt
gttcaagcagctaatagaaacgataactgggaggacctagtcaagttcttacagatggcc
aggaagaaggctagagagtcttatgtagagacggaacttatttttgccttggcaaaaact
aatcgtctctcagaactggaggagtttattagtggccctaataatgcccatatacagcag
gttggtgatcgctgttacgaagaagggatgtatgaagcagcaaaactactctataacaac
gtgtctaactttgctcgcctggcatctaccttggtacaccttggagagtatcaggcagca
gtggacagtggccgcaaagccaacagcacaaggacttggaaggaggtatgctttgcatgt
gtggatggaaaagaattccgcttggcacagatatgtggcttacacatagtcattcatgct
gatgaacttgaagagctgattagttactatcaggatcgtggctactttgaagaactgatt
gctcttttggaagctgctttgggtctagagcgtgctcacatgggaatgtttactgaactt
gccatcttatactctaaattcaagcctcagaaaatgagggaacatctggagctcttttgg
tctcgagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
ctcgtattcctttatgacaaatatgaggagtatgacaatgcaataattacaatgatgaat
catcccaccgatgcctggaaagaagggcagtttaaagacataattgccaaggtggccaat
gtggagctgtattacaaagccttgcaattctacttggactacaaacctctgctgatcaat
gatcttctccttgtattatctccacgactggatcatacgaggacagtcaattttttctca
aaggttaatcagctacttctagtaaagccttacttgcgttcagtccagaaccacaacaac
aaaggagttaatgaagctctaaataaccttttaacagaggaggaagactaccagggtttg
agagcttccattgatgcctatgacaactttgataacataacactggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcatacttgtataagggcaacaaccgc
tggaaacagagtgtggagctatgcaagaaagaccatctgtataaggatgctatgcagtat
gctgcagagtccaaagatgcagaactagctgagaagctgcttcagtggttcctggaagaa
ggcaagcaggagtgttttgcagcctgccttttcacgtgttatgacttgctgcacccagat
gtagtccttgagttggcatggaggcataacatcatggactttgcaatgccttatttcatc
caagtgatgagagagtaccttaccaaagttgatgggctgttctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtacctccccaggcaaacttc
ccatacggatactcagcaccgggattcacccagccacctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
