Aythya fuligula (tufted duck): 116496317
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Entry
116496317 CDS
T07966
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03440
Homologous recombination
aful03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116496317 (TOP3B)
03460 Fanconi anemia pathway
116496317 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aful03032
]
116496317 (TOP3B)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116496317 (TOP3B)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116496317 (TOP3B)
DNA replication proteins [BR:
aful03032
]
Eukaryotic type
DNA Topoisomerases
116496317 (TOP3B)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116496317 (TOP3B)
FA (Fanconi anemia) pathway
116496317 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
116496317
NCBI-ProteinID:
XP_032055188
UniProt:
A0A6J3E0Y4
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Position
17:10158970..10173452
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AA seq
862 aa
AA seq
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MRTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYTGSFIGQSAHFKMTSVCGH
VMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDK
EGENICFEVLDAVLPVMNKPRSTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNPEKESSLTLDWDRVRVFDREIAQMFLNITKMAKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYMQGYISYPRTETTHYPENFDLKGCLRQQANN
PYWAETVKALLSEGINRPRKGHDAGDHPPITPMKAATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTISFSIGPERFTCIGKLVTSPGFTEIMPWHSIPLEESLPHCEKGDLFPIGE
IKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDSTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCDLCDAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGRRQGRGRGKGRR
PGGRPNPKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgtgctgatggtcgccgagaagccctcgctggctcagtccatcgccaagatc
ctttccaggggaaacatgtcctctcgcaaaggactgaatggtgcatgctctgtgcatgag
tacaccggatcatttataggacagagcgcccatttcaagatgacatctgtgtgtggtcac
gtcatgactttggatttcataggaaaatacaacagttgggacaaggtggatccagcagaa
cttttcagtaaagctcccacagaaaagaaagaagctaatcccaaactgaccatggtgaag
tttttacaggtggaggggagaggctgtgattgcattgtcttgtggttggactgtgataag
gaaggagaaaacatctgttttgaagttcttgatgctgttcttcctgttatgaacaaacct
cgtagcaccgaaaggacgatttatagagctaaattcagttccattactgacacagacatc
tgcaatgccatgaatcatttgggagaacccaatcgcaatgaagctctgtcagtggatgcc
cgccaggagctggaccttagaattggctgtgcatttacaagatttcagactaagtatttt
caggggaaatatggaaatttagacagctctctcatctcctttgggccatgtcagacgcca
acacttggattctgtgttgaaaggcatgacaaaatccagtcatttaagcctgagacttac
tgggtgctgcaagctaaagtgaatcctgagaaagaaagttctctgactttggattgggat
agagtgagggtgtttgatcgtgagattgctcaaatgttcctgaatataacgaagatggca
aaagaagcaaaggtagaatctgtgagtaaaaaagagaaggtgaagcagagaccactggct
ctgaacacggtagaaatgctacgagtggccagtgctgctttaggaatgggtccgcagcat
gccatgcaaatagcagagcgtctttatatgcagggttacattagctaccctcgaacagaa
actacccattatccagaaaactttgacttgaaaggatgtttgagacaacaagccaataat
ccctactgggcagaaactgtaaaagcattgctatcagaaggcattaatcgtccaaggaaa
ggccatgatgcaggggaccatcctcccatcactccaatgaaagctgcaacagaagcagaa
ttgggtggagatggatggcgactatatgagtacataactaggcattttattgccaccgtg
agcgctgattgcaagtacctacaaacgaccatttctttcagtatcggccctgaacggttt
acctgtattggaaaactggtaacttcaccagggttcacagaaattatgccttggcacagc
atcccattagaagagagccttccgcactgtgagaaaggagatctttttccaattggtgaa
ataaaattgctggaaaagcaaaccagccctcctgattacctgacagaagcagaacttatc
actctgatggaaaagcatggcattggaactgatgcaagtattccagtccacatcaacaac
atttgccagcgaaactatgtcacggtagagagtggtcggagactaaagcctacaaatctt
ggaattgttctggttcatggttattacaaaatagatgcagaattagttcttcctacaatt
cgcagtgctgtggaaaagcaactcaacttaatagctctgggtaaagcaaattaccatcag
gtcctggagcacacccttgacatcttcaaaaggaaatttcactattttgtggattctatt
gcaggtatggatgagctgatggaagtgtctttttcacccttagctgctacgggtaaacct
ctttcccgctgtggcaaatgccatcgtttcatgaagtatattcaggccaaaccaagtcgt
ctgcactgctctcactgtgacgacacctacagtctcccacagaatggtacaattaaactc
tacaaagagttgcgttgccccctggatgactttgagctggtgctgtggtcttctggatcc
agaggaaagagctaccctctctgtccatactgttacaaccatcctcctttcagggacatg
aaaaaaggaatgggctgtaatgaatgcacccaccccacatgccagcattctcttagcatg
cttggaattgggcagtgcgttgaatgtgagaatggggttctggtgctagactcgacatca
ggtcccaagtggaagatggcctgcaacaaatgcaacgtgatcgtgcacttctttgagaat
gcccacaaagtccgagtgtcaccagagacctgtgacttgtgtgatgcagcccttgtggac
gtagattttaacaaagccaaatctcctctacctggtgatgagacccagcattccggctgc
gtattctgtgaccctgtgtttcaagacctggtggagctgaaacatgcagccatgaggcac
cccatgcaccgtgggggacaaggaagaaggcaaggtcgaggaagaggtaaaggccggagg
cctggaggaagacccaatccaaagaaacccaaggacaaaatggcagctctggccgcttac
tttgtataa
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