Aythya fuligula (tufted duck): 116496328
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Entry
116496328 CDS
T07966
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116496328 (SBNO1)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116496328 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116496328
NCBI-ProteinID:
XP_032055223
UniProt:
A0A6J3E127
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Position
17:complement(3386197..3419211)
Genome browser
AA seq
1410 aa
AA seq
DB search
MHAKPQLNVTCIYDLNFLEMVEPGQDLLLAALSESGISPNDLFDIDSPDVVLANPAPTPA
VQQSVPLSALELGLETEATAAVKQEPETVSTPALLNVRQPPSTTTFVLNQINQLPTLGTT
IVMTKTTPVTTTRQTITVAKIIQTSTTTRPSVAAPAVRNALTTAPSKDQIQLKDLLKNNS
LNELMKLKPPPNIAQPVATAATDLSNGAVKKEASTKEVARIWINDIKMRSFSPTMKVPAV
KEEEEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQTSISE
ETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLG
RKRAVWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYS
SLIGESQSGGKYKTRLKQLLHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLEL
QNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVA
MDMKLRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLWVCARERFQQAADLIDAE
QRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEA
LEEGGGELNDFVSTAKGVFQSLIEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKEN
KIKKRKGEEVSREAKKARKTGGLAGSSSDESESESDASDNEESDNESLRYMSSGDDDDFN
PFRDESSEDDEDDPWLIRKEHKKNKDKKKKKSIDPDSIQSALLASGLGSKRPSCFTSTVG
TTTSSTNTSANSNTNSSFVTSQDAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGG
PENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAAS
SGISLQADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQ
RFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSP
PPDFPGDFFKDVRQGLIGVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQ
YFSDTLNAVIQNAKKNGRYDMGILDLGSGDEKVRKADVKKFLTPGYSTSGHVELYTISVE
RGMSWDEATKLWAEQTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLK
LETCADLKKKYKKVPSEDALPHWLEQYNSSADTCTHAYWRGNCKKAGLGLVCEVGLRCRT
YYVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLS
TSDQSQQLAVQQQQIWQQHHPQSITNFNNA
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctaaacctcaattaaatgtaacttgtatttatgatcttaattttttagagatg
gtggagccaggacaagatctgttgcttgctgctttgagtgagagtggaatcagtccaaat
gatctatttgatattgactctccggacgtggttcttgcaaatccagctccaactccagct
gttcagcagtcagtgccacttagtgcattagagctaggcttggaaaccgaggccacagct
gctgtgaaacaagaaccagagactgtatcaactccagccttattaaatgttcggcaacca
ccatccaccacaacctttgtgctgaatcaaataaatcagcttccaactttggggactaca
atagtgatgacaaaaacaacacctgttacaaccacaaggcagactattactgtagcaaaa
atcattcagaccagcacaactactcgaccctcagttgcagcaccagcagtacggaatgcc
ttgaccactgcaccatcgaaggaccagattcagctgaaagatcttctgaagaataatagt
cttaatgaactaatgaaattgaagccacctcctaacattgcccaaccagtggcaacagca
gcaactgatctaagcaatggtgcagtgaagaaggaggcttccacaaaagaggtagcaaga
atatggataaacgatattaaaatgaggagtttttcacctactatgaaagtgccagcagta
aaagaggaggaggaacctgaggaagaagatgaagaagaaatgggccatgcagaaacttat
gctgagtatatgccaataaaattaaaaattggtctacgtcatcctgacccggtagtggaa
accagctcgttatccagtgtaactcctcctgatgtgtggtaccagacatcgatatcagaa
gaaacaattgataatggctggctgtcggctttgcaacttgaagcgatcacttatgcagcc
cagcaacatgaaacattcctgcccaatggagacagagctggattcttgataggtgatggt
gctggtgtaggaaaaggaaggaccatagctgggataatctatgaaaattacttgttaggc
agaaaaagagcagtctggtttagtgtgtcgaatgatctgaaatacgatgctgaaagagac
ttgagagatattggagcaaaaaacattttggttcattcattaaacaagttcaagtatggg
aagatttcttccaaacacaatggaagcgtgaagaagggtgtcatttttgccacatattcc
tctcttattggtgaaagtcagtctggtggtaaatacaagaccagattaaagcagcttctt
cactggtgtggtgaagactttgatggagtcattgtatttgatgagtgtcataaagccaag
aatctgtgtcctgttggttcgtcaaaaccgacaaaaacaggtctggctgtactggaactt
caaaataaacttccaaaagctagggttgtttatgctagtgccacaggtgcatctgagcca
agaaatatggcatacatgaaccgtcttggaatatggggtgaaggaactccatttagggaa
ttcagtgactttattcaggctgtcgaaagaagaggtgttggtgccatggaaatagttgct
atggatatgaaactgagaggaatgtacatagctagacagttgagtttttcaggtgtaact
ttcaaaattgatgaagttctgctttcacaggaatatgttaaaatgtacaataaatctgtg
aaactgtgggtctgtgctagagaaagatttcaacaagcagctgatcttattgatgcagaa
caacgaatgaaaaagtctatgtggggtcaattttggtcagctcatcagaggtttttcaag
tacctttgcatagcatctaaagtgaagagggtggtgcagctggctcgggaagaaatcaag
aatgggaaatgtgttgttattggcctgcagtcaacaggagaagcaaggacgctagaagct
ttggaggaaggtggtggtgaactgaatgactttgtttctacagcaaaaggagtattccag
tctcttattgaaaagcactttccagctcctgacaggaagaaactgtttagcttgttggga
attgacttgactgctcaaagcaacaacaattcacccagagacagcccttgcaaggagaac
aaaataaagaagcggaaaggtgaagaagtaagcagagaagccaaaaaagctcgtaaaaca
ggtggccttgcgggtagcagctctgatgagagtgaaagtgaatctgatgcttcagacaat
gaagaaagtgacaatgagagcctcagatatatgagttctggagatgatgatgacttcaac
ccattcagagatgaatccagtgaagatgatgaagatgatccctggctaattagaaaagag
cataaaaaaaataaagacaagaaaaagaagaaaagtatagacccggattctattcaaagt
gccttattagcttctggtcttggctcaaaacgacctagctgttttacttccactgttggt
accactacttctagcaccaacacatcagcaaacagtaacacaaacagcagctttgtaaca
agtcaggatgctgttgaaagggcccaacaaatgaagaaagaactgcttgataaactggaa
aagctggctgaagatcttccacctaatacactggatgagcttatagatgaactgggtggt
cctgaaaatgttgcagagatgacaggccgcaaagggagagttgtgagcaatgatgatggc
agcatatcttatgagtcaagatctgaacttgatgtgcctgttgaaattctgaacatcaca
gaaaagcagaggttcatggatggagataagaacattgccataatctcagaggctgccagc
tctggtatttcattgcaagcagaccgtagagctaagaatcagaggcggagagttcacatg
actctggagttgccatggagtgcggatagagcaatacagcagtttggaagaactcacagg
tccaatcaagtgactgctccagagtatgtattcctaatttctgagttggctggagagcaa
agatttgcatccatagttgcaaaaagactggaaagcttgggagccctcacccacggtgac
aggcgggctacagaaactcgagacctcagcagattcaattttgacaacaagtatggcagg
aatgctttagagattgttatgaaatccattgtgaatttagactccccaatggtctctcca
ccacctgattttcctggagacttcttcaaagatgttcgtcaaggattgattggtgtgggc
ttgataaacgtagaagacagatctggaattctaacgcttgataaagattataacaacata
ggaaaatttctgaatagaattcttggtatggaagtacatcagcagaatgctttattccag
tacttttctgacacgttaaatgctgttattcaaaatgctaagaagaatggaagatatgat
atgggcatcttagatctgggctctggggatgagaaagtaaggaaggcagatgttaagaag
tttttaactcccggatattctacctctggacatgtagaattatacacaatcagcgtagag
agaggaatgtcttgggatgaagcaactaagctctgggcagaacaaacaggtccggacgat
gggttttatttatcactacagataagaaataacaagaaaacagctattctcgtgaaggaa
gtgaatcctaaaaagaagctttttttagtatacagaccaaatactgggaaacagctcaaa
ctagaaacatgtgcagacctgaaaaagaaatataagaaggtaccttctgaagatgcttta
ccacactggttagagcagtacaattcttctgcagacacctgcacacatgcgtattggaga
ggcaattgtaagaaggcaggcttgggattagtttgtgaagtgggactccgctgtcgaact
tactatgtcttgtgtggttcagtattgagcgtctggacaaaagtagaaggcgttctagcc
tctgtgagtggtacaaatgtgaaaatgcaaatagttcgtctaagaacagaagacggtcag
aggatcgtaggcttgatcattcctgcaaattgtgtatcgccccttgtaaacctcctgtcg
acgtcagaccagtctcaacagcttgcagtacaacagcagcagatatggcagcagcatcac
ccacaaagcatcaccaatttcaacaatgcataa
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