Aythya fuligula (tufted duck): 116496356
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Entry
116496356 CDS
T07966
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aful03009
]
116496356 (DDX55)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116496356 (DDX55)
Ribosome biogenesis [BR:
aful03009
]
Eukaryotic type
Pre-60S particles
Helicases
116496356 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
AAA_22
Motif
Other DBs
NCBI-GeneID:
116496356
NCBI-ProteinID:
XP_032055272
UniProt:
A0A6J3E058
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All DBs
Position
17:3474093..3480714
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AA seq
600 aa
AA seq
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MEAVTEGRWEALPVALSPGVLRALRGLGFTGMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVIPILEILLRREQKLKKMQVGAIIITPTRELAIQIYEVLSHFTEHFPMFSQILLIGG
RNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMG
FESSLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASNTQKTPT
RLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQAKIMCIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMKPQKDVLDLLPKLKSMALADRAVFEK
GMKAFVSYIQAYAKHECNLIFRIKDLDFATLAKGFALLKMPKMPELRGKCFPDFTPVTVN
TDSIPFKDKNREKQRQKQLEQLEQQRKERQESGGKKKLIKNKSWSKQKAKKAKKKKATAK
RKHEEGSDVDDEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGTQSKLKAETVADLESEC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgacggaggggcgctgggaggcgctgcccgtggcgctcagccccggcgtc
ctgcgggcgctgcggggcctcggcttcaccggcatgaccccggtgcagtctgccaccatt
ccgctcttcatgagtaacaaagatgtcgccgcggaagcagtaacaggcagcggcaaaacc
ttagccttcgtaattcccatcctagaaattcttctcagacgggagcaaaaattgaaaaaa
atgcaggttggagctataattatcacaccgacaagagaattagctattcaaatttatgag
gttttgtcacacttcacagaacacttccccatgtttagtcagattcttttaataggcggt
aggaatcccatggaagatgttgaaaaatttaaagaacatggtgggaacatcattgtagct
acgccaggccgcttggaggatctgttcagaagaaaagcagatgggctggatcttgcaagc
tgtgtgaagtctcttgatgtgttggtgttagatgaagcagacagacttctcgatatgggc
tttgagtcaagtttaaatgccattctggactttttacccaagcagagacggacaggtctg
ttctcagcgactcagactcaagaggtggagaacctggtgagagcaggtctccggaatcct
gtccgcatctcggtgaaagagaagggagtggcagcaagcaacacacagaaaactccaaca
cgcctggagaactactacatgatatgcaaagcagacgaaaagttcaatcagttggtgcac
tttcttcgacagcacaaacaggaaaaacatctagtctttttcagcacatgtgcctgtgtg
gaatactacgggaaggctttggagtccttaattaaacaagccaaaataatgtgcattcat
gggaagatgaaacacaagcgtaacaagatttttaccgagtttcggaagctcccaggaggc
atcttagtttgcactgatgtgatggcccggggcatagacattccagaggtacactgggtt
ttgcagtatgacccacctagcagtgcaagtgcctttgtgcaccggtgtggtcgaacagca
cggattggcaatgtcggcagtgctcttgtatttttgcttcccatggaagaatcctatgtt
aactttctctcaatcaaccaaaagtgtcccatgcaggaaatgaaaccacagaaagatgtg
ttggatcttcttccaaaactgaagtctatggccctagctgacagggctgtgtttgagaaa
gggatgaaagcatttgtgtcttacatccaggcttatgccaaacacgagtgtaatctgatc
ttccggataaaagatctggattttgctactcttgcgaaaggttttgccttgttaaaaatg
ccaaagatgcctgaactaagaggaaaatgttttccagactttactccagtcactgttaat
acagactccattccatttaaggataaaaatagagaaaaacagagacaaaagcaactagag
caactagaacaacaaagaaaggaaagacaggaaagtggaggaaaaaagaaattaataaag
aacaaatcctggtcaaagcagaaagccaaaaaggcgaagaaaaagaaagcaacagctaaa
aggaaacatgaagagggctctgatgttgacgatgaggacatggaagagttgctgaatgac
acaagactcttgaaaagattaaaaaaggggaaaattagtgaagaagagtttgagaagaga
ctaacaggcacccaaagcaaactgaaagcagaaactgttgctgacttagagtctgaatgt
tga
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