Aythya fuligula (tufted duck): 116496395
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Entry
116496395 CDS
T07966
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116496395 (TNRC6C)
03036 Chromosome and associated proteins [BR:
aful03036
]
116496395 (TNRC6C)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116496395 (TNRC6C)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116496395 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
116496395
NCBI-ProteinID:
XP_032055319
UniProt:
A0A6J3DX82
LinkDB
All DBs
Position
18:complement(4940177..5022179)
Genome browser
AA seq
1807 aa
AA seq
DB search
MVGRLLSSDLSHSGLGDHYENSHWGQQPTFRSEGNCSWDKVIIDRTDKEAWPSITGAETE
SASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGALVQSTSNQSALGA
GGANGNGNSARVWGVAAGSGSGLAHCSASGGDGKMDNMIGDGRSQNCWGASNSNAGINLN
LNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQES
TEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIP
PHLQGLPGANGTSVSQVSGGSGEGMGSSVWGMSPSNPATGNSNSGFSQGNGDTVNSALSA
KQNGSSSAVQKEGNGASAWDSGPPSGPGVLAWGRGGGNSGVGSMHSGAWGHPNRNASNGV
NGEWGKPPNQHSNSDINGKGSTGWDGSSVTSPNPAMQQGNEQMNSWAKAAASGTTASEGS
NDSSGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTA
WEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGWVNSPPAAVPT
NTGWGDNNNKAPNGPGGWGESASSTTVNNAAAAKSGHAWSGTANQEDKSPTWGEPQKPKT
QNWGDGQKSNPSWTSGGGDWTDSSSVPGHLGDGKKNGSGWDSDNRSGSGWNDSTRSGTSG
WGNGTNSKANTGTSWGESLKPGPQQNWANKPQDNNVSNWGGAASVKQTGSGWVGGPVPAK
QKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPIIQSSTTTNT
TTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPAGWGEMPNVHTKTEASWGEPSSPSAAVD
NGTSAWGKPPSSGTGWGDNPAESAGTYGRTNAPAAAPALCKPASKSMQEGWGSGGDEVNL
STSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQLT
DMGFPREPAEEALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPIS
KESSMDRPTFLDKLTLSFSNQDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASG
LGMQNLNSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQ
VQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSG
PMRQQEQQVARTINNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHP
QAPGLPDLQTKEQQSSPNTFAPYPLAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTH
PNSMDNLSSAASSLDQNSSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVA
VPHSWSRAKTDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINT
TIQDVNRYLLKSGGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKS
TWSSGPISHTQASLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSA
WSTDSSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAA
KAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQPLPPTSSWQSNTGSNQTRLGSAGGSH
GLVRGDTGHWNSPCLGGKGSSDLLWGGVPQYSSSLWGPPSTDDGRVIGSPTPLNTLLPGD
LLSGESI
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggttgggcggctcctttcttcagatctcagtcacagtggattgggagaccattatgaa
aattcccactggggacagcagcccactttcaggagtgaaggcaactgcagctgggataaa
gtgataatagacaggactgacaaggaagcgtggccttccatcacaggagctgagactgaa
tctgcctcagaatgtactacagacactgactctgcctccaactgtggctcagagaacagt
agcatggctacagggagtgcccaaggcaacttcactggacatacaaagaaaactaatggc
aataatggcgccaacggagcactcgtccaaagcacttctaaccagagtgcccttggagct
ggtggagcaaacggtaacggaaactcggccagggtgtggggggtggctgcaggctccggc
tctggcctagctcactgctctgccagcggtggggatggaaagatggacaacatgattgga
gacggtagaagtcaaaactgctggggtgcttccaactcaaatgctggcattaatcttaac
cttaaccctaatgccaatccagctgcctggcctgtactcggacatgaaggaactgtggga
gcaggcaacccttccagtatttgcagtccagtcagtgccataggtcagaacatgggcaac
cagaatgggaacccaacaggcaccttaggtgcttggggaaacttgctgccgcaagagagc
acagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaacctt
aacactgatggaccaaataacactaaccccatgaactcttcaccaaaccctatcaatgca
atgcagacaaatggactgccgaactgggggatggctgttggtatgggggccatcatcccg
ccccacctgcaaggccttcctggtgctaatggaacatcagtttctcaagtcagtgggggc
agtggtgaaggaatgggcagttcagtatgggggatgtcccccagtaatcctgccacagga
aacagcaattctgggttcagtcaggggaatggagacactgtgaactcagcattaagtgct
aaacaaaatggatccagcagtgctgtgcaaaaggaaggaaacggagcgagtgcgtgggat
tcggggcctccttctggccctggggtactagcgtggggcaggggcggtggcaacagcggt
gttggtagcatgcattctggagcttggggccaccccaaccgtaacgccagtaacggtgta
aacggtgagtggggcaagcccccaaaccagcattccaatagtgacatcaacgggaaagga
tcaacggggtgggatggctcaagtgttaccagtccgaatcctgccatgcagcagggcaat
gaacaaatgaactcctgggccaaagctgcagcatctggcaccacagctagcgaaggaagt
aacgatagcagtggaagtcaaaatgaaggcagtactgggagggagggggctggagaaggc
aggaggagagataaagggatgatagaccaagggcaagttcagttgccaagaaatgacctt
gaccccagggtcctgtccaatacagggtggggacagacccctgtaaagcaaaacactgcc
tgggaatttgaagagtccccaaggtctgaacgaaagaatgacaatggaacggaggcctgg
ggttgtgcagctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaac
agtacaaatacctcttcagtatctgggtgggtcaactctccacctgcagctgttccaaca
aatacaggttggggagacaataacaacaaagcaccaaatggcccagggggatggggagag
tcagcaagctctactactgttaataatgctgctgctgccaaaagcggccacgcttggagt
gggaccgcaaatcaggaggacaaatcacctacctggggtgaacctcagaaacccaaaact
caaaactggggagatggacagaaatcaaatccaagctggacttcaggaggtggagattgg
acagattcgtcatctgttcctggacacttgggtgatgggaagaagaatggatctggatgg
gactctgacaataggtcagggtctggttggaatgattccacgaggtctgggaccagtggg
tggggaaatggcacaaacagcaaggcaaatacaggtacaagttggggggaatcgttaaag
ccaggcccccaacaaaattgggctaacaaaccccaggacaacaatgtgagtaactgggga
ggagctgcttctgtaaaacagacggggtcggggtgggttggtgggccggtgccagccaaa
caaaaagagaactgtgaggcaactggctgggaagagccatccccaccgtccattcgccgc
aagatggaaatcgatgatggtacctcagcttggggcgacccaaattacaacaacaacaag
actgtaaacatgtgggatagaaataatcctataattcagagcagtaccacaaccaatacc
accaccactagcaccattatcaacacaaacatggttgaacctcagccatcgcaccagtca
agtgcccagccgaaccggtccccgctgcttggtccagcaggctggggagaaatgcctaac
gtccacacaaagaccgaagcttcttggggagagccgtcatccccttctgctgcagttgat
aatggcacttcagcgtgggggaagccccccagcagtggtacagggtggggagataatcct
gccgagtcggcagggacatacggaagaacaaatgctccagctgctgccccagcactgtgc
aaaccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgaagtgaatctc
agtactagtcagtgggaagatgaagaaggagatatgtggaataatactgcttcacaagag
agcagctcctcctgtaactcctgggggaatgccccaaagaaaggacttcaaaagggcatg
aagacatctagcaagcaagatgaggcctggatcatgaaccgcctgataaaacagctcaca
gacatgggcttccctagagagccagcggaagaggccttgaagagcaacaatatgaatctc
gatcaggccatgagtgctctgctggaaaagaaggtggaaatggacaagcgtggaatggga
gtgaccgactataatggaatggtcaccaaaccccttggctgccgcccaccaccaatctcc
aaagagtcttccatggaccgccccaccttccttgacaagctcaccctttctttctccaat
caggatggcggcctagtggaagagcccactacttcaccatttttgccttcaccaagcctg
aagctccccctttcaaacagtgcactccctaatcagaccctgggcgggattgcctcaggg
ctgggcatgcaaaacttgaattcttctcgacagataccgagtggcaatctgggtatgttt
ggcaatagcggagcagcacaagccaggaccatgcaacagccgcagcaaccgccagtgcaa
cctcttaattcatcccagcctagtcttcgtgctcaagtgcctcagtttctatcccctcag
gttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcaaccctgcactatta
acctcgccaattaatcctcagcatatgacgatgttgaaccagctctatcagctgcagctg
gcgtaccaacgtttacaaatccagcagcagatgttacaggctcagcgtaatgtttccgga
cccatgagacaacaggagcagcaagttgcacgtacaatcaataacatgcagcagcagatc
cagcagcaccagcgccagctggcccaggccctgcttatgaagcagcagcctccccctcca
catctatctttgcacccctctgcaggcaaatcagccatggatagcttttcaccccatccc
caggctcccggccttcctgacctgcagaccaaagagcaacagtcttcaccgaacaccttt
gctccttaccctcttgctggactgaacccgaacatgaatgtaaataacatggacattact
ggtggtttgtcagtgaaggacacttctcagtcccagtctcgccttcctcagtggacacac
cccaactcaatggataatctgtctagtgctgcttcttctcttgaccagaactccagcaag
cacggtgctatacctggaggtttaagtattggtcctccgggaaagtcctccattgatgac
tcttacggccggtatgatctgattcaaaacagtgaatcgcctgccagtccacccgtagct
gttcctcacagctggtcacgtgccaaaactgatagtgataaaatttccaatggctccagc
ataaactggccaccagaatttcatccaggagtgccatggaaaggactgcagaatattgat
cctgaaaatgaccctgatgttactcctggaagtgttccaactgggcctaccataaacacc
acaatacaggatgttaatcgctatcttctcaagagtggagggtcatccccaacatcatct
cagaatgccacgctgccttcatcgagtgcctggccgcttagtgcctccggctacagtagc
tctttcagcagcattgcatccgcacctagcattgcaggtaaattgtcagacatcaagtct
acgtggtcctctggcccaatctctcacacacaagcctctttatcccatgaactatggaag
gtacccagaaacactactgctcctacaagacctcctccaggcttaacaaacaccaagcca
tcgtctacatggggtgccagtcccctgggttggaccagctcttactcctctggttcagca
tggagtactgacagctcagggagaacaagcagctggctggttcttcgaaacctcacaccc
cagattgatggttccacactgcggacactgtgtttgcagcatggccctctaataacattc
cacctgaacctgacacaagggaatgctgtggtccgatacagttccaaggaagaagcagcc
aaggcccaaaagtctctgcatatgtgtgtcctgggaaacactaccatcttggccgagttt
gctggtgaagaggaagtaaaccgtttcttagcacaaggccagcccctgccgcccacctcc
agctggcagtccaacactggaagcaaccagacgcgcctgggctcggcgggcggctcgcac
ggcttggtgcgcggcgacaccggccactggaacagcccctgcctggggggcaagggcagc
agcgacctgctgtggggtggggtgccccagtactccagcagcctctggggaccccccagc
accgacgacggccgagttatcgggagccccacacctctgaatactcttcttccaggtgat
cttctcagtggggagtccatctag
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integrated database retrieval system
