Aythya fuligula (tufted duck): 116496775
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Entry
116496775 CDS
T07966
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aful03000
]
116496775 (RC3H2)
04121 Ubiquitin system [BR:
aful04121
]
116496775 (RC3H2)
Transcription factors [BR:
aful03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
116496775 (RC3H2)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116496775 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
116496775
NCBI-ProteinID:
XP_032055936
UniProt:
A0A6J3DX34
LinkDB
All DBs
Position
19:1960253..1989904
Genome browser
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSSNGIANLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSQFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDMIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSALHMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDST
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYTEDCADAKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttagcactctacttaaagccattaagtggaggaaaaggtgttgctagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacactagtgaattgt
caactggtagaggaagagggtcgggttcgagctatgagggcagctcgatcactgggagag
agaactgttacagaactgatcttgcagcaccaaaatcctcagcagctttctgccaacctt
tgggctgctgtcagggcacggggatgtcagtttctagggccagctatgcaagaagaagca
ctgaaacttgtattactggcattggaagatggctctgcgctctcaagaaaagttctggta
ctttttgttgtgcaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttacgaggctttgcggagagagcat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcacacatgcaatccattatcgacaag
ctccaatctccagagtcttttgcgaagagtgtacaagaattgacaattgtcttgcagcgc
acgggcgatcctgcaaatttaaacaggctcaggcctcatttggagctcctggcaaatata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtggct
gtaaagactgtggtacatggattggtggatttcattcagaattacagtagaaaaggacat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
caacaagggggatgtccaagaggaaccaactgtacttttgctcattctcaggaagagctt
gaaaaataccgcctgaggaacaaaaaaatcagtgcaacagtgagaacgttcccccttcta
aataaagttggcgtaaatagcactgtctcgaccactacgggaaacgtaatttctgtcata
ggaagccctgaagcaacagggaagatggtgccgagtagtaatggaatagctaatctagaa
agtggtgttccccagttgatccctcgctgtgcagacacctctttgagagctttggagaac
accaagaagggagggaagactggagccaatggccagaacgtttcgggatcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcggcagct
acctcagctggtcctcccaacattggaacagaagtgaactctgtgcctccaaaatccagc
cagtttgttcccagagtacctgtctaccctccacattctgataatgttcaatatttccaa
gatcccaggactcagttgtcgtatgaagttccacagtacccccagacaggctattatcca
ccacctccaacagtaccagctggcgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtatccacgagatgatatgattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tattactctgtggcttgtcaacccccaaatgaacagaggactgtgcctttaccaagggag
ccttgtggtcacttgaagactggttacgatgagcagttaagacggaagccagagcaatgg
gcacaataccacacgcagaaaactcctcttgtgtcgtcagcccttcatatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgccgtgttaatggatttggacagcggggatgttaaaagaagagtgcat
ttatttgaaactcagagaagggcaaaggaagaagatcctataatcccgtttagcgatgga
ccgatcatttccaagtggggtgcaatctccaggtcatcccgtacaggttatcacacaaca
gatcctattcaggccactgcttcccaaggaagtgcaactaagcccatcagtgtatcagat
tatgtcccttatgtcaatgccgttgactcgagatggagttcgtatggctcagattccact
tcatcagcacgttacgcagaacgggacagattcatagttacagatttgtctggtcacaga
aagcattccagcactggagatttattaagtattgaattacagcaggccaaaagtaactcg
ttattacttcagagagaggcgaatgcactagccatgcagcagaagtggaattctctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
actgattatactgaagactgtgcagatgcaaagccagatcgagacattgaattggagctg
tcagccctagatacagatgaacctgatgggcagggtgaacaaatagaagagattctggat
atacagctaggtattagttctcaagatgatcagctgctcaatggaacaactgtagagaac
gggcatccactaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
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