Aythya fuligula (tufted duck): 116496801
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Entry
116496801 CDS
T07966
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116496801 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aful03041
]
116496801 (PRPF4)
Spliceosome [BR:
aful03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116496801 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116496801
NCBI-ProteinID:
XP_032055994
UniProt:
A0A6J3DZ11
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Position
19:10351973..10359446
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AA seq
536 aa
AA seq
DB search
MASARAPAARGGARPPARPPAPPEATKSKPPEESDAPPAKRAPIFYGSLEEKERERLAKG
ESGLLGKEGMKAAIEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDS
EVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTW
YHEGPRSLKTARLWLANYSLPRAVKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCS
QIGDDRPLSYCHFSPNSKFLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAIVFHPKAT
VSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHS
WRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGH
LKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLL
TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcgcgggcaccggcggcgagaggcggagcgcggcccccggcgcggcccccg
gcaccgccagaggccacaaagagcaaaccccccgaggagagcgatgcgccgcccgccaag
agagcgcccatcttctatggcagcttggaggagaaggagagggagcggctggcaaaggga
gaatcgggtctgctggggaaagaagggatgaaagctgcgatcgaggctggcaacattaac
ataagtagcggtgaggtttttgatctggaagatcatatgagcgagcggcaggcagaagtg
ttggctgagtttgagcgcaggaagagagcccggcaaatcaacgtgtccactgatgactct
gaagtgaaagcctgcttgcgagcactcggggaacccatcacgctcttcggagaaggtcct
gccgaaaggagggagagattaagaaatatcctttcagtggttggcactgatgcgttaaaa
aagactagaaaagatgacgacaggtcaaaaaaatccaaagaagagtatcagcaaacctgg
taccatgaaggaccacgcagtctgaaaacagcaaggctgtggcttgctaactactcactt
cccagggcagtgaagcggctagaagaagcacgactactcaaagagattccagaagcaacc
aggacatcacagagacaggagctgcacaaatccctgcgatccttgaataacttctgcagt
cagattggagatgatcgcccgctgtcctactgccacttcagccctaattccaaattcttg
gctactgcctgttggagtggactttgtaagctctggtctgtgcctgactgcaaccttgtt
cacaccttgcgaggacataacaccaatgtaggagcaatagtcttccaccccaaagccact
gtctccctagacaagaaggacgttaacctggcctcgtgtgcagctgatggttctgtcaaa
ctctggagccttgaaagtgatgagccagtggcagatattgaaggtcacagcatgagagtg
gcacgtgtgatgtggcacccttctgggaggttcctgggtactacctgctatgatcactcg
tggcgcttgtgggacttggaagctcaggaagagattctccatcaggaggggcacagcaaa
ggggtctatgacattgcctttcacacagatgggtctcttgctgggactggtggactggat
gcttttggccgggtgtgggacttgcgcacgggacgctgtatcatgtttctggaaggccac
ttgaaggagatctatggactgaatttctccccaaatggataccatgtcgcaactggcagt
ggtgacaatacttgcaaggtgtgggacctccgccagaggaagtgcatctacaccattcct
gcccatcagaacctggtgactggggtgaaatttgaacccaatcatggcaacttcctgctg
actggcgcttacgataacacggcgaagatctggactcaccctggctggtcccctttgaag
acactggcgggtcatgagggaaaggtgatgggactggatatctcccttgatggtcagctg
atagcgacgtgctcctatgacagaacctttaagttgtggacagcagagtag
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