Aythya fuligula (tufted duck): 116496807
Help
Entry
116496807 CDS
T07966
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03013
Nucleocytoplasmic transport
aful05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116496807 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116496807 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116496807 (NUP98)
03036 Chromosome and associated proteins [BR:
aful03036
]
116496807 (NUP98)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116496807 (NUP98)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116496807 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Peptidase_M26_N
Motif
Other DBs
NCBI-GeneID:
116496807
NCBI-ProteinID:
XP_032056020
UniProt:
A0A6J3E1H4
LinkDB
All DBs
Position
1:complement(206315630..206350540)
Genome browser
AA seq
1815 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQPQTTSLFNKPFGQATTTQNTG
FSFGNTNTLGQPNTNTMGLFGATQPSQPGGLFGTAANTNAGTGFGTGTSLFGQTNTGFGV
GGSTLFGSKPAGFGTTTTSAPSFGTTTGGGLFGNKPTLTLGTNTNTSNFGFGANTAGNSL
FGNKPATGTLGTGIGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGF
GAPQPAVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKK
LVLKNLNNSSLFSPVNRENEDLASPSEYPENGDRFFLSVPSDENHRQDGEREEEEDQHEV
TRFYTNPIAKPIPQTPENTVHKHQNNVDDTIVALNMRAALRNGLEGSSEDASFHDDSLQD
EREEETETMHHVHPAGIVLTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYF
EGEVNLTNLNLDDIVHIRRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLI
KSPERLAEMNYEGRLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPL
KVDTKKLKTTPVPPPGHLPPQQMALNGKPTPPSQTPEVEQLGRVVELDSDMADITQELPQ
ESVLEDNMMEEQEAVPASTHIASTLGINPHVLQIMKASLLADEDDLDLILDHHPGKQAIK
MDTSQEICSPRLPISKAQGQKRCSVGGLLQSKFANLICQPPGTAVQDFKGLRTSGSSPSA
ALWSAASPLASAFAVPPSVPEVQVKTVGVRRQQGLVPLDKSITHRKGKLLMDMALFMGRS
FRVGWGPNWTLVNCGDRLSRSSEVEDPQCESVEYGFLPAPVAPKLLSESSFKVHVEKVSL
EQRKMDRDKQLYLIPLEIKLKHSTVHMDEQCPLLAPNPGVSVIHDYSDWVRKASKDPAVT
ETVVKHWCLTWTLCEAIWGNLKELEASLEEPSEYNLALERRRAFSRWLSETAAARIDEEV
SLSRHDNHVEAVFSFLTGRRIGEACRLAQQSGDHRLALLLSQLAGSQPLRELLTMQLVDW
HRLQADCFIQEERLRIFALLAGKPVWQLSERVSINVCSQLDWKRCMAVHLWYLLPPTASI
SQALAMYESAFQNTPESEKYACCPLPPYLEGSGCVIEEDDNAGRPLRDVCFHLLKLYSDR
HYDLDHLLDPRSVTSDPVDYRLSWHLWEVLRALNYTHLLKQGQGVLNASYAAQLESEGLW
EWAVFILLHEPDTHIREKAVRELLHRHCVLSETPESWAKETFLTQRLCVPAEWIHEAKAV
RARMEGDRHKEALFLFKAGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLSPPERSVL
IQDWEVAGLVYLDYIRVIEMVDRIQQLDCSPYELERLHTKVTSLCNRIEQIQCRNAKDRL
AQSDMAKRIANLLRVVLSLQHTPEPVSDSIPAVQRVPLRLLAPHIGRLPMPEDYALEELR
SLTQSYLRELTVVTQ
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaatccttcggaactccgtttggaggcagcactggctttgggacaacttca
acatttggacaaaatgctggctttggtactacgagtggaggagcgtttggcacctcagcc
ttcgggtcgaacaacaacactggaggcctcttcggcagcacacagacaaagccaggaggg
ttgtttggttcgacgacgtttaaccagccggccacctcctccacgagtactggctttggg
tttgggacatcaacggggacgtcaaacagcctgtttggcaccaccagcaccggtggaggg
ctcttctcatcccagagcaatgcctttgcgcagaacaagcccgctggcttcggaaacttt
ggaacaagcaccagcagtggcggcctctttggaaccacaaacacaacttccaatcctttt
gggagtacatctggctctctcttcggcccaactagtttcactgctgctccaactggcaca
accattaagttcaatccaccaaccggtacagatactatggtaaaatctggagttagcact
aacattaataccaagcaccagtgcattactgctatgaaagaatatgaaagcaaatctctt
gaggagctccgtttagaagactaccaggcaaacaggaaaggccccacaaaccctgtagga
gcaggagcaactgcaggcttgtttgggtcttctacggctacgtcaagtacagctacagga
ctctttggctcttctactactaatacaggcttttcttacggacagaataaaactgctttt
ggaactagtacgactggctttggaacaggaacgacaggggggctttttggtcagcagcct
caaactacgagccttttcaacaaaccttttggtcaagccacaacaacgcagaacaccggc
ttttcctttggcaataccaacacgctggggcagccaaacacaaacacgatgggtctcttt
ggggcaacccagccctcgcagcctggaggcctctttggaacagctgccaatacaaatgct
ggtactggatttggaacgggaactagtctttttggacaaactaacacaggatttggtgtt
ggcggttcgaccctgtttggtagcaagccggctggatttggaaccaccacgaccagtgct
ccctcgtttggcacaaccactggcggcgggctctttggtaacaaaccaaccctgacttta
ggaaccaatacaaacacttccaattttggttttggtgccaacactgctggaaatagctta
tttggaaataagcctgcaactgggactctgggaactggaattgggacagggtttggaaca
gctcttggggcaggacagacttctttatttggaaatacccagcctaaacttggtggaaca
ctgggaacaggagcttttggagcaccggggttcaatacatcaactgcaactctgggcttc
ggagcccctcagcctgctgtagcactgacagaccctaatgcatcagcagcccagcaggcg
gtcctccagcagcacctcaatagcttgacttactcacccttcggagattccccgctgttc
agaaaccccatgtcagatccaaagaagaaagaagagaggctgaaaccaacaaacccagca
gctcagaaggccttaacgacacccacccactacaaactgactccacgccccgcgaccaga
gtgcgaccaaaagctttgcagtcagctggctctgccaaatcccagctcttcgatggtctc
gatgatgatgagccatccctgtccaacggcgcgttcatgcccaagaagagcatcaagaag
ttggttttgaagaatctcaacaatagcagtctgttctcacctgtcaatcgtgaaaacgaa
gacctggcttctccgtcagaatatccagagaatggagaccggttctttttgtcagtacct
tctgacgaaaaccacagacaagatggtgagcgagaggaagaggaggatcaacatgaagtg
accaggttttacactaaccccatcgccaagcccatcccccagactcccgagaacactgtg
cacaaacaccagaacaacgtggacgataccatcgtggctctgaatatgcgggcggccttg
cgaaatggtctggaaggcagcagtgaagatgcctcgtttcacgacgattcccttcaagat
gaacgtgaagaggagactgaaaccatgcatcatgtgcatcctgcaggaattgttctaaca
agagctggctattacaccatcccgtctatggaggagcttgctagatttaccaacgacaga
aatgaatgtattgtgactgacttcaccatcggccgtaaaggttatggatcaatttacttt
gaaggagaagtaaatctaacaaacttaaatctggatgacattgtacatatccgtaggaaa
gaagtgattgtttaccctgacgatgaaagaaaaccacctattggtgaaggtttaaataga
cgagctgaagtgacattagatggagtctggcctacagataaaacatctcgttgcttgata
aaaagccctgaacgacttgcagagatgaattacgagggtagactcgagtctgtatctcgg
aagcagggcgctcgattcaaggaataccgtccagagaccggatcttgggtgtttaaggtg
gcacacttctccaagtatggcttgcaagattcagacgaggaagaggaagagcatccttta
aaagtggacacaaagaagttaaaaaccacacctgtgccacctccagggcatctgccaccc
cagcaaatggccctaaatggcaagcccacgcctccatctcagaccccagaggtggagcag
ctgggcagggttgtggagctggacagtgacatggcagacatcacccaggagcttccccag
gagtctgttctggaagataacatgatggaagagcaggaggcagtgcctgcttcaacccat
attgcatcaacgctgggtattaacccccacgtcttacagattatgaaagcttccttgctt
gctgatgaagatgacctagatttgatcctggatcatcatcctgggaagcaagctataaaa
atggatacttctcaagagatctgttctccaaggctccctatttcgaaagcacaaggacag
aaaagatgctcagttggtgggctgctgcaatcaaaatttgctaatctcatttgccaaccg
cctggcactgctgtgcaagacttcaagggactgaggacttcgggcagttccccctctgct
gccctttggtcggcagcttctccgctagcatctgcattcgctgtacctccctcagtcccg
gaggtgcaggtgaagacagtgggtgtccgcagacagcaggggctagttcctctggacaag
tccatcacccacaggaaggggaagctgctgatggacatggcgctcttcatggggcgctcg
tttcgtgttggctggggacccaactggacacttgtcaattgtggagatcggttaagtagg
tcaagcgaagtggaagaccctcagtgtgagtctgtggagtatggattcctgcctgctccg
gttgctcccaaattactctcagaatcttctttcaaggttcatgtggagaaagtgagcttg
gaacaaaggaagatggacagagacaaacagttgtatctcatccctctggagataaagctg
aaacacagcactgtccatatggatgagcagtgtcctcttctagcacccaatcctggagtt
tctgttattcatgactattctgactgggttagaaaggcatccaaggatcctgccgtgaca
gaaaccgttgtgaagcactggtgcttgacgtggacgttatgtgaagcaatctgggggaac
ttgaaggagttggaagccagcctggaggagcccagtgaatacaacctagccctggaacgc
aggagagccttctctcgctggctgtcagagaccgctgcggcacgaatagatgaggaggtc
tctttgtcccgacacgataaccacgtggaggccgtgttcagcttcctcactgggaggaga
attggcgaggcttgcagactggcacagcagtcaggtgaccaccggcttgctctgctcctc
tcgcagctagcaggcagccagcccctccgcgagctcctcaccatgcagctggtggactgg
caccggctgcaggcagactgcttcatccaggaagagaggctgcgcatcttcgcactgctt
gcagggaagcctgtgtggcagctctctgagagagtaagcatcaacgtgtgctcgcagctg
gactggaagcgctgcatggctgtccatctctggtacctgcttcctccaacagcttctatt
tcccaggcccttgccatgtacgagtcagcatttcagaacacaccagagtctgaaaaatac
gcctgctgccccctgcctccttacctagaaggttctggttgtgtaattgaagaagacgat
aatgcaggaagacctctgagggacgtctgtttccatttgttaaagctctacagtgacagg
cactatgaccttgaccatctgctggatccaagaagtgtaacatccgaccctgtagactat
cgtctcagctggcacctgtgggaggtgctcagagccctgaactacacccacctcctcaag
caggggcagggagtgctgaatgccagctacgctgcccagcttgaaagcgaaggcctttgg
gaatgggctgtttttatactgctgcacgagcctgatactcacatacgggaaaaggcagtg
cgagaactcttacaccggcactgcgtgctgtccgagacacccgaatcgtgggccaaggag
accttcctgacacagaggctctgcgtccctgccgagtggattcatgaagcaaaggctgtt
cgagcaaggatggagggtgaccggcataaagaagccctcttcttgttcaaggctgggcac
tggaaccagtgtcacaagcttgttgtcaggcacttagcctcagatgctattattaatgag
aactacaagtacctaaaaggattcctggaagacctctcccctcccgaacgcagcgtgctc
atccaggactgggaggtggcagggctggtctatctggattacattcgtgttatcgagatg
gttgataggattcaacagctggattgttccccatacgagctggagcgtttgcataccaaa
gtgacttcgctgtgcaacaggatagagcagatacagtgccgcaacgcaaaggaccggctg
gctcagtcagacatggccaagcgcattgctaacctgctcagggtggtcctcagcctgcag
cacaccccggagcccgtctccgactccatccctgccgtgcagcgcgtcccccttcgcctg
ctggctccccacatcggacggctgcccatgccagaggactatgccctggaggagctgcgc
agtctcacccagtcgtacttacgggagctgacagtagtgactcagtga
DBGET
integrated database retrieval system
