Aythya fuligula (tufted duck): 116496887
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Entry
116496887 CDS
T07966
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116496887 (AFF3)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116496887 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
116496887
NCBI-ProteinID:
XP_032056225
UniProt:
A0A6J3E239
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Position
1:complement(139407346..139744015)
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AA seq
1239 aa
AA seq
DB search
MDSFDLALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQEDGTFNTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQASLPKPDEHLIADSRPPP
LPSISSTSSSTPAALPTQQSKSTTMGWQKAGHNATSEGQQRASKHGHHSLESHKGDFKLA
NQKSSLEKLKRYASSPTSSSSSSNAAQQSSLRATLGDNANRVPQPAKLSCNTEGGAQAQE
RPSKHGGGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKLPAETTKSYR
GVPSNKPDSARTKSKIAKFSIPKQEEDSGTGDNSCIEEILREMTHSWPPPLSAIHTPGKA
EQSKFSFPNKESQQGSTGHSNTRKSDVEPKSPEKSATHTSMLEDDLKLSSDEEENDQQAA
QRSALRVLSDSSLVVPQSSTRAPGLSSKGSSSSSSSESETSSESDSESESSSSESDGSKP
SHYSSPEPEPPSSNKWQLDKWLNKVTPHKAPILTHHDGPALEAHPYYGHVKAERQEGEKT
PATGPAEHRSGEGRTTTVTTTATVGDGPRPRTANKAPGSKGGRQKSPPAADSGPPRRAAG
KKAPRRAERTSAGDGSHCRGAEEPAGSHGFLESTAGEAPRARPVGSGSGGGCRAGHRREP
RSATAGEKRRARGPSKTAPKSKEFIETESSSSSSSSDSGSESEREERPLPKAPAAAGAEP
RTKDAGTGAASKPHGGCSAFGSINARTSSEIAKELEEQFYTLVPFGRNELLSPLKDSDEV
KSLWVNIDLALLSRIPERLPEEPLAMSTGANQAASLPQGSSADPPAEKGLPKSRRKRKCE
NEEEYRDIKKTHLERESSSRLAASAHNITTANHCNMNENSLAIPINKNEKMLRSPVSPLS
DASKHKYSNDDLTSSSRPNGSSLLPSISSSKKHKGEIQSQPHPGDFNKAIHINSENVLCN
KPQSQTEPWSPLSGTPRDCRRTKLIFDDMPRNADYFMQEAKRKKHKADAMVEKFGKALNY
AEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHSGPNATPEDKQLAALC
YRCLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAAQNPSPWGTSGKSTGTPSPMSPSP
SPVSSVGSQGSTGAPSPSPIISIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENRD
FFNDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSAHLS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagctctgctccaggagtgggacctggactctctgtgtgtctat
gagccggatagaaacgtgctgcgcaggaaagaatgggaaaggagaaatcaggaggcccag
caggaggatggcacatttaacacaagttactccctcttcagtgaaccgtacaagaccaac
aagggggatgagctatcaaatcgcatccagaataccctgggcaactatgatgaaatgaaa
gacttgttaactgaccgatcaaaccagagccaccttgttggggttcccaaacctggggtt
cctcaggcatctctccccaagcccgatgaacatcttattgcagactcaagaccgccacct
cttccctctatttccagcacttcttcttccacaccagcagctctacccacgcagcagagc
aaaagcaccacaatgggttggcagaaggctgggcacaatgccacttcagagggccagcag
agagccagcaaacatgggcaccactcactggagtcacacaagggcgacttcaaactggcg
aaccaaaaatccagtctggagaaactaaaacgctatgcatctagtcccacttcctcttcc
tcctcctccaacgctgctcagcaaagctcactgagggccacactaggtgacaacgccaac
agagtgccacagcctgcgaagctaagttgtaacacagaaggaggagctcaagcgcaagag
aggccctcaaagcacggcggcgggcactgtgtccaaaacttcccaccatctcttgcttcg
aagcccagcctggttcagcagaaaccaacagcctatgtaaggccgatggatggtcaagat
caggcccctgatgagtctccaaagctgaagttaccagcagagacaaccaagtcatacagg
ggagtgccttctaacaagcctgattcggccaggaccaagtcaaagatagcaaagttcagc
attcctaagcaagaagaggacagtggaacaggagataacagctgcattgaagaaatattg
cgggagatgacccattcttggcctccaccactatcagctattcacacaccagggaaggca
gaacaaagcaagttttccttcccaaacaaggagtcacaacagggatctacaggacacagc
aatacaagaaaaagtgatgtagagccaaagagtccagagaaaagtgcaacacatacatca
atgctagaagatgacctcaagttaagcagcgacgaagaagagaacgaccagcaggcagca
cagagatctgctctccgcgttctgtctgacagcagcctggtggtgccgcagtccagcacc
cgagccccgggactctccagcaaggggtcgagcagcagcagctccagtgaatccgagacc
agctcggagtctgactcggagagcgaaagcagctccagcgagagcgacggcagcaagccc
tcacattactccagcccagagcctgagccaccctcgtccaacaagtggcagctggacaag
tggctgaacaaagtcacccctcacaaagcacccatcctgacccaccatgacggcccggca
ctggaggcccatccctactacggccacgtgaaggcggagcggcaggaaggcgagaagacc
ccagccaccggcccagccgagcaccgcagcggggagggccgtaccaccactgtcaccacc
accgccaccgtcggggacgggcctcggcccaggaccgccaacaaagcaccaggcagcaag
ggcggccggcagaagtcacccccggctgccgacagcgggcctccaaggagggcagcaggg
aagaaggcaccacggcgggctgagaggacctcagctggggacggctcccactgccgtggg
gcagaggaacccgccgggagccacggctttctggagagcaccgctggtgaggcaccgaga
gcccgacctgttggcagtggcagcggtggaggctgcagagcagggcaccgccgggagccc
cgctcggccacagccggcgagaagcgtcgggcacgggggccaagcaaaacggcacccaaa
tccaaggagttcatcgagactgagtcctcctcatcgtcatcttcctctgactcgggctct
gagtcggagcgggaggagcgcccgctgcccaaggcgccggcggcagctggggctgagccg
cgcaccaaggacgcggggaccggtgccgccagcaaaccccacggcggctgcagtgccttt
ggctccattaatgccaggactagtagtgaaatagcaaaggagctggaggaacagttttac
accttggttcctttcggtaggaatgagctcctgtctcctctgaaagacagtgatgaggta
aagtcactgtgggtcaacattgacttggctcttttgtccaggattccagagcgtttgccc
gaagagccgctggcaatgagcaccggagcaaaccaggcggccagcctcccgcagggtagt
agtgctgacccccccgcagagaagggtttaccaaaatctagaaggaaacgcaagtgtgag
aatgaagaagaatacagagatatcaagaagactcatttagagcgagagagttcttcacga
ttagctgcctctgcccataacatcacaacagcaaatcactgcaatatgaatgaaaatagc
ttggcaataccaataaataaaaatgagaaaatgcttcggtcacctgtctctcccctctct
gatgcatcaaaacacaaatactccaacgatgatttaacttcctccagcagacctaatggc
agcagtctattaccttccatctcctccagcaaaaaacataagggtgaaatccagtctcag
ccacatcccggagacttcaataaagcaattcacatcaattcagaaaacgttctctgcaat
aagccacagtcccaaacagagccttggtcacctctgtccggcacacccagggactgcaga
aggacaaagcttatctttgatgacatgccacgcaatgcagattactttatgcaggaagct
aaacggaagaagcataaagcagatgcaatggtggaaaagtttggaaaggcactgaattat
gcagaagcagcactatcgtttattgagtgtggaaatgcaatggaacaaggcccaatggaa
tctaaatccccctatacaatgtattcagaaacagttgaactcatcaggtacgcggtgaga
ctaaaaacccactcaggccccaacgccacgccagaagacaaacagctggcagcattatgt
taccgctgcctggcccttctgtactggaggatgttccgactcaagagagaccatgctgtc
aagtattcgaaagcacttattgagtattttaagaattcctcaaaagctgcccagaaccca
tctccttggggtaccagtggaaagagcacaggaactccatcacccatgtcccctagccct
tctccagtcagctctgtagggtcccaggggagcacaggggccccttccccatctcctata
atcagcatcccacagcgcattcatcagatggctgccaaccacgtcagcatcaccaacagc
atcctgcacagctacgactactgggagatggctgacaacctggccaaggaaaacagagat
ttttttaatgacttggatgcattgatgggacctatcaccttgcacagcagtatggagcat
ttagttcagtacactcaacaaggacttcactgggtgcggaatagcgctcacttgtcataa
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