Aythya fuligula (tufted duck): 116497054
Help
Entry
116497054 CDS
T07966
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aful04121
]
116497054 (PDZRN4)
Enzymes [BR:
aful01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116497054 (PDZRN4)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116497054 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-rbx1
PDZ_Tricorn
Prok-RING_4
TRAF3_RING
Sina_ZnF
RING_XB3-XBAT31
IBR_1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
116497054
NCBI-ProteinID:
XP_032056459
UniProt:
A0A6J3E084
LinkDB
All DBs
Position
1:30920850..31164396
Genome browser
AA seq
1022 aa
AA seq
DB search
MGFDPERFAAPVAAELQCKLCGRVLEEPLATPCGHVFCAGCLLPWAARRGRCPLRCRPLA
PADLRPVLPLRSLVQKLEVKCDYSPRGCRRVLRLRELPAHLAACRYGPPAARPPGPEEGG
PPGTPRPGEGHRRPRALRGGGPEPGPEPRREAVSWSRREKALLAQLWALQSEVRLTALRY
QAKFGQYMSHISSITRDLTGGRRGGAGEPKPLTIMLHRENDTLGFNIIGGRPNQNNQEES
AEGIYVSKILENGPADKAEGLKIHDKIIEVNGKDLSKATHEEAVEAFRNAKEPIVVQVLR
RAPISKAQGSSQDVHLVDACTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHP
AEHEFYEGNEYLSSLPADADRTEDFEYEEVELCRISSQEKLGLTVCYRTDDEEDTGIYVS
EVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLSSDECKKIVLLVARPEMQLEEG
WLDDERNEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEKDS
GVGPTDESLRNDESSEQENAPEEQNSATLQCKRELGHSQDTLGSVELQCNESFLSGEYIE
SDFIGNPEEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNRREQDGVEHELQLLNEEL
RNIELECQNIMQAHRLQKVRDQYGDIWALHDEGFRNYNTSIDVQRGKLDDIMEHPEKSDK
DSSSAYNTAESCRSTPLTVERSPDNSLQRMISITNRKNLRSTVVANQSSSGQSNKETTSA
KKPTEQNSAAEDTMLASESGKFTDQEKQSTEHIPYLSPYHSSSYRYGNIPAHAKHYQSYM
QLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILKER
ALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKES
PQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVT
TV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccggagcgcttcgcggcgccggtggcggcggagctgcagtgcaagctg
tgcggcagggtgctggaggagccgctggccacgccgtgcggccacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcgggggcgctgcccgctgcgctgccgcccgctggcg
cccgccgacctgcgcccggtgctgccgctccgcagcctggtgcagaagctggaggtcaag
tgcgactacagcccgcggggctgccgccgcgtcctacggctgcgggagctgcccgcacac
ctcgcggcgtgccgctacgggcccccggctgcgcggccccccggcccggaggagggcggc
ccccccgggaccccccggccgggcgaggggcaccggcgcccgcgggcgctgcggggaggc
ggcccggagccggggccggagccgaggagggaggccgtgagctggagcaggagggagaag
gcgctgctggcgcagctgtgggcgctgcagagcgaggtgcggctcacggcgctgcgctac
caggcgaagttcggccagtacatgagccacatcagcagcatcacccgcgacctgacgggc
ggccggcgcggcggggcaggagaacccaaaccattaacgatcatgctacacagagaaaat
gatactttgggattcaatattataggaggacgacccaatcagaacaatcaggaggaatct
gctgagggaatttatgtgtcaaaaattttggaaaatggacctgcagacaaagcagaaggc
ctgaaaattcatgacaagattattgaggtcaatgggaaggacctctccaaggccactcat
gaagaggcagtggaagcttttcgcaatgccaaggagccaattgtagttcaagttttacga
cgagctccaattagcaaagctcaaggtagctctcaggatgtacatcttgtggatgcctgc
actcagactgacatcacttttgagcacattatggctctggccaaactaaggccttccaca
ccgccagttcctgatatctgcccttttctactttcagacagctgccattctcttcaccca
gcggagcatgaattttacgaaggtaatgagtatctttccagcctgcctgctgatgcagat
agaacagaggactttgagtatgaggaggtggagctgtgccgcattagcagccaggagaag
ctggggctgactgtctgctacagaactgacgacgaggaagacacagggatctatgtcagt
gaggtagatccaaacagcattgctgccagagacggacggatccgtgaaggagaccgtatt
ttgcaaattaatggccaagatgtccagaatcgggaagaggcagtagcattgctctccagc
gatgaatgcaagaaaattgtgttgctggtagcaagaccagagatgcagctggaggaaggg
tggctggatgatgaaaggaatgaattcttggaggagttgaacttagaaatgctggaagag
cagcataatgaagcgatgcagtacacagccaatgaggtggagcagccaaagaaacatgag
gaagaggatggaactacagacactgcaacctcatcatccaacaatcatgaaaaggacagt
ggggtgggacctacagatgaaagtttgcgtaatgatgagagctcagagcaagaaaatgca
cctgaggagcagaacagtgctaccctgcagtgcaaacgggagctgggtcacagccaagat
acgttaggaagtgttgagctccagtgcaatgaaagctttttatcaggggaatacatcgag
tctgatttcatagggaacccagaggaggaatgtgaaaggtttcgacagctgctggaactg
aagtgcaaaattcgaaaccatggggagtacgacctgtattactcgagcagcacaatagag
tgcaacagaagagagcaagatggagtggagcatgagctgcaactgctcaatgaggaactg
aggaatattgaactcgaatgtcagaatattatgcaagctcaccgactccaaaaggtgagg
gatcagtacggagacatttgggctttacatgatgaagggttcaggaattacaacaccagc
atagacgtgcaaagaggcaaactagatgacatcatggagcaccctgagaagtctgacaag
gatagctccagtgcctacaacacagcagaaagttgcaggagcactcccctgactgtggag
cgatcccctgacaactctctccagcggatgatcagcatcaccaacaggaaaaacctgagg
agcacagttgtggcaaatcagtcatcctcaggacaaagcaacaaagagacaacctcagcc
aaaaaacccactgaacaaaacagtgcagctgaagacaccatgctggcatcagaaagtggc
aaattcacagaccaagaaaagcagagcactgagcacattccctacctgtctccgtatcac
agctcttcttacaggtatgggaatatacctgctcatgcaaagcattatcaaagctacatg
cagctgatccagcagaagtcagccgtggagtacgcccaaagccaactcagcctggtgagc
atgtgcaaagactcacagaagtgtgcggagcccaagatggaatggaaagtgaaaataagg
agcgacgggacaaggtatatcacaaagagaccagttcgagacagaatcctgaaggaacgt
gccttaaaaattaaagaggagcgcagtggaatgacgacagatgatgatacaatgagtgag
atgaagatgggtcgctactggagcaaagaagagaggaagcagcatttggtgcgagctaag
gagcagaggaggcgacgggagttcatgatgcgtagcaggctggagtgtctcaaggaaagt
ccgcagagtggcagcgagggcaaaaaggaaattaacattattgaactgagtcacaaaaag
atgatgaaaaagagaaacaagaaaatcttggacaactggatgacaatccaagaactgatg
acacatggtgctaaatctccagacggcacaagagtgcacaatgcctttttatcagttact
actgtatga
DBGET
integrated database retrieval system
