Aythya fuligula (tufted duck): 116497132
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Entry
116497132 CDS
T07966
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116497132 (SUPT6H)
03036 Chromosome and associated proteins [BR:
aful03036
]
116497132 (SUPT6H)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116497132 (SUPT6H)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
116497132 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
116497132
NCBI-ProteinID:
XP_032056561
UniProt:
A0A6J3DYV1
LinkDB
All DBs
Position
20:6808228..6835336
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEEAEGETRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQAASSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDSLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
DEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRAPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLVDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGATLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPS
YSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtagaaagcgaggcggaggagtcggaggaggagtacaaccaggacggg
gaggtcgtgcccagagtcaccaagaaatttgtagaggaagatgaggacgatgaggaagag
gaagaggaaaatctggatgatcaagatgagcaagggaacctgaaaggattcattaatgat
gatgacgacgaggaggaggaagaggaggaagaagccagtgactctggagactctgaagac
gatgttggccacaaaaagagaaagcgcacctttgatgaccgcctggaggacgacgatttc
gacctcatcgaagagaacttgggcgttaaagtcaaacggcaaaaattcaggcgcgtgcgg
aagatgtccgatgatgaggatgatgaagaggaagactatgggaaggaagagcatgagaag
gaagccattgctgaagaaatctttcaggatggcgaaggcgaggagggaggggaagctgtt
gaagctcctgttgctccaccagaagaagaggaggaggaggaagaagatgaatctgacatc
gatgacttcattgtggatgacgatggacaacctctgaagaagccaaaatggcgaaagaag
ctccctggatacactgatgctgccttgcaggaagctcaggaaatcttcggtgtggacttt
gactatgatgagtttgagaagtacaacgagtacgatgaggagatggaggaggaatatgaa
tacgaggatgaagaggctgaaggggagacccgcgtccgacccaagaagaccaccaagaag
cgtgtcagtcgccgtagcatcttcgagatgtatgagcccagtgagctggagagcagtcac
ctaacagaccaggacaacgagatacgcatgacagacatgcctgagaggttccagttgcga
tccatcccagtaaaaagcgctgaagatgacgagctggaggaagaagctgactggatttac
aggaatgcatttgcaacacccaccatctccttgcaggaaagctctgactaccttgatcgt
ggacaagctgccagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaa
gccctgaatttcatgagaaatcaacacttcgaggtcccattcatcgccttctacagaaag
gagtatgtagagccagagttgcacatcaatgacctgtggagagtctggcagtgggatgag
aagtggacccagctgaagatccgcaagcagaacctgacacgtctgtttgagaagatgcaa
gcctaccagtatgagcaaatatctgctgacccagacaagcctttggctgatgggataagg
gcccttgatactactgacatggagaggctgaaggatgtgcagtccatggacgagctgaag
gacgtgtataatcacttcctgctgtactatgggcgagacatccctaagatgcagaatgct
gcaaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaagaaggt
gaaggagaggatgctgaagatgatgagcagaaagggcctgagctgaagcaggcttcccgt
cgggatatgtacaccatctgtcaaacagctgggctggacagcctggctaaaaagtttggt
ctgacacccgagcagttcggagagaatctccgagacagttaccagcggcacgagacagag
cagttccctgcagagcccctggagctggccaaggattacgtgtgtagtcaattccccagt
ccagaagctgtgctggaaggagcccggtacatggtggctttgcagatagccagagagcct
ttggtcaggcaggtcctgaggcagactttccaagagagagctaaaatcaacatttcacca
accaaaaaggggaagaaggatattgatgaagcccactatgcctattcctttaaatacttg
aagaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcggag
gacgaggcgctgctgactatagacatcagcattgacatgaaaggagtggagggttatggt
agcgaccagacatactttgaggaaatcaaacagttctactatcgggatgagttcagccac
caagtgcaggagtggaatcggcagcgtactatggccattgagcggtccctcaaccagttc
ctctacgtgcagatggctaaagagttgaagaacaagctgttggtggaggccaaggaatat
gttctcaaggcctgcagccgcaagctgtacaactggctaaaagtagcttcgtaccgtcct
gatcagcaagtggaggaagatgatgatttcatggacgaaaaccaagggaaggggattcgg
gtgctaggcattgccttttcctcagccagggaccaccccgtgttctgtgctcttgttaat
ggagagggcgaggttacagacttcctccgattgccacatttcacaaagagaaggaatgcc
tggcgcgaggaagagagggaaaagaaggcacaggatattgaaaccttgaaaaaatttctt
ttgaacaagaagcctcacgtggtgacaatcgcaggcgagaacagggatgctcagatgctg
atggaggatgtaaagagaattgttcacgagctggatcaggggcagcagctgtcctctata
ggagtggagctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgag
aatgaatttcgggactacccacctttgctgcgtcaagcagtctcccttgctcgtcgcatt
caggatcctctcatagagtttgcccaggtctgcagctctgatgaggatattctctgcctg
aaactccaccctctgcaggagcacgtggtgaaggaggaactgctgaatgccctctactgc
gaattcataaaccgcgtgaacgaggtgggagtggatgtcaatcgggcaattgctcaccct
cacagccaggctttgctgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctg
ctaaagatcttaaaacagaacaacacacgcctggagaacaggacccagctggttacgatg
tgtcacatgggacccaaggtgttcatcaactgtgctggcttcatcaaaattgacacggca
tcgctgggcgatagtactgattcctacatcgaagtcctagatggttccagagtccatccc
gaaacctacgaatgggcaagaaaaatggcagtagatgccctggagtatgatgagtcagct
gaggatgctaatcctgcaggagctctagaggagatcttagaaaaccccgagcgactgaaa
gacctggatcttgatgcctttgctgaagaactggaacgacagggctatggtgacaagcat
atcactctgtatgacatccgagctgaactgagctgcaggtacaaggacctgagaacaccg
taccgtgctccaaacacagaagaggtcttcaacatgctgaccaaagaaactccagagact
ttttatataggtaaaatgatcatctgcaacgtcaccgggatagcccacaggcggccacaa
ggagaaagctacgaccaggcaatacggaacgacgaaactggcctttggcagtgtcctttc
tgtcagcaggataacttcccagagctcagtgaggtttggaatcactttgacagcggttcc
tgcccaggtcaggccatcggagtgaagacacgtctggataatggcgttgctggcttcatc
ccaacaaaatttcttagtgataaggtggtcaaacggccagaagaaagggtgaaggtggga
atgaccgttcactgcaggattatgaagatcgacattgagaagttcagtgcagatctgacc
tgcaggacttctgacttggtggataagaacaacgagtggaaactgcctaaagacacctac
tatgacttcgactctgaggcagcagatcacaaacaggaagaagacctgaaaagaaagcag
cagcggacaacgtacatcaagagagtaattgctcacccgtcattccacaacattagcttc
aagcaagctgagaagatgatggagaccatggaccaaggggacgtgattattcggccaagt
agcaaaggggagaaccaccttacagtcacctggaaggtgaacgatgggatttaccagcac
gtggatgtccgagaagagggcaaggagaacgctttcagtctgggcgccacgctttggatt
aacactgaggagtttgaagacctggatgaaattgtcgctcgctatgtccagccgatggct
tcttttgccagagacctgttgaatcacaaatactatcaggattgcaacggtggagacaag
aagaagctggaagagctgctgataaagaccaagaaagagaagccaacgtttattccctac
tttatcagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcgaggc
aaaccaaggatagagtatgtgacagtcacaccagaaggattccgctaccggggccagatc
ttccctaccgtgaatggactcttccgatggtttaaggatcattatcaggaccctgttcca
ggtattacccccagcagtagcagtcggaccagaactccagcctccattaatgctactccg
gctaacattaacctggcagacctgacccgtgcagtgaatgccctcccgcagaacatgacc
tcccagatgttcagtgccatcgctgccgtgacgggccaggggcagaaccccaacgccacc
cctgcacagtgggcatccagtcagtacggctacgggggcagcggaggtggcagcagcgcg
taccatgtcttcacgactccagcacagcaaccagtggccacccctctgatgacccccagt
tactcctacactacccccagccagccgatcacgaccccccagtaccagctgcaggccaac
accaccccccagtccacccagtcccagacacagtcgcagccatcgtccagctccaggcag
aggcagcagccaaagaccaacagccacgccgcgatcgactgggggaagatggccgagcag
tggctccaggagaaggaggctgaacggaggaaacagaagcagaggttgactcctcgcccg
tcccccagccccatgatcgagagcacgcccatgtccatcgccggggacgccacgccgctg
ctcgacgagatggaccgataa
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