Aythya fuligula (tufted duck): 116497139
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Entry
116497139 CDS
T07966
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04142
Lysosome
aful04144
Endocytosis
aful05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116497139 (CLTC)
04142 Lysosome
116497139 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116497139 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116497139 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116497139 (CLTC)
Membrane trafficking [BR:
aful04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116497139 (CLTC)
Exosome [BR:
aful04147
]
Exosomal proteins
Proteins found in most exosomes
116497139 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
116497139
NCBI-ProteinID:
XP_032056572
UniProt:
A0A6J3E3Z2
LinkDB
All DBs
Position
20:8628283..8658181
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcccatccgcttccaggagcacctccagctccaaaacctgggcatc
aacccagcaaacatcgggttcagcactctgacgatggagtctgacaaattcatctgtata
agagagaaggtgggagagcaggcgcaagtggtgatcatcgacatgaacgaccccagcaac
cccattcggaggccgatttcagccgacagtgctatcatgaaccctgccagtaaagttatt
gcattaaaagctgggaaaacacttcaaatattcaacattgagatgaagagcaagatgaag
gctcatacaatgacagatgatgtcaccttctggaagtggatctctctgaatactgttgcc
cttgtaacggataatgcagtctaccactggagcatggagggggagtcccagcccgtgaaa
atgtttgatcgccattcgagtcttgctggctgccagatcatcaactaccgtactgatgcc
aagcagaagtggctgctgctgactggcatatctgcacagcaaaaccgtgttgtgggagca
atgcagctctattctgtagatagaaaagtgtcacaaccgattgaggggcacgcagccagc
tttgcgcagttcaagatggaaggaaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagttgcatatcattgaagttggtacaccaccgactgggaat
cagccgtttccaaagaaagcagtggatgtcttctttcctccggaagcacaaaatgacttt
cctgttgcaatgcagatcagtgacaagcatgatgtggtgtttctgataacaaagtatggc
tatatccacttgtatgacctggaaactggcacctgtatctacatgaacagaatcagtgga
gagaccatatttgttactgcccagcatgaagcaacagccggaattataggagtaaacaga
aagggacaagtgctgtcagtatgtgtggaagaagagaatattattccctacatcaccaat
gtgctccagaatcctgacctggctttacgaatggctgtccgcaacaacctggctggagct
gaggaactttttgctagaaaattcaatgcactgtttgcacaagggaactattcagaggca
gcaaaagtggcagctaatgctccaaagggaatcctgcgtactccagacaccatccgtcgg
ttccagagtgttccagctcagccaggacagacttctcctttactccagtactttggtatt
ctgcttgaccaagggcagctgaataagtatgagtcgctggaactctgcagaccagttctt
cagcagggacgcaaacagctcttggagaaatggttaaaagaagacaagctggagtgttca
gaggagcttggagatctcgtgaaatctgtagatcctacactagcacttagtgtctacctg
agagccaatgttccaaacaaagtcattcagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttgggtatactccagactggattttcttgctgaggaac
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagacataacacaaattgtggatgtctttatggaatataacttaattcag
caatgtacagccttcttgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcatgcgcctcaggttgcagatgctatcctg
ggaaaccaaatgtttactcattatgaccgggctcacatagctcagctgtgtgagaaagct
ggcttgctgcagagagcactcgaacacttcacagacttgtacgacatcaagcgtgcagta
gttcacactcatcttctcaatcctgagtggttagtgaactattttggctccttatcggta
gaagactcgctggagtgtctgcgtgctatgttatctgctaacattcgtcagaacctgcag
atctgtgtccaggtagcttcaaaataccacgaacaactgtcaacacagtcgcttattgaa
ctctttgagtccttcaagagctttgaaggtttgttttatttcctgggctctattgtaaac
ttcagccaggatccagatgtgcacttcaagtatattcaagctgcatgcaagacagggcaa
attaaagaagtagaaagaatctgcagggaaagcaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagctaccgctcatcattgtgtgtgatcgc
tttgactttgtccatgacttggtgctgtacctgtacagaaataatctccaaaagtacatc
gagatttatgtacagaaggtgaacccaagccgcctgcctgttgttatcgggggactgctt
gatgtggattgctctgaagatgtgatcaagaaccttatccttgttgtgagaggccaattt
tcaactgatgaacttgttgcagaggttgagaagagaaacaggctgaaattgcttctgccc
tggctggaagcaagaattcacgagggttgtgaggagcctgcaactcacaacgcgttggcc
aaaatatacattgatagcaacaacaacccggagagattcctgcgtgagaatccttactat
gatagccgcgttgttggcaagtactgtgagaagagggaccctcacctggcctgtgttgct
tatgagcgtggacagtgcgatttggaactcatcaatgtgtgcaatgagaactccctcttc
aaaagcctttctcgttacttggttcgccgtaaagaccctgaactgtgggccagtgtgcta
ttggaaagcaacccttacagaagaccactgattgaccaggttgtacagactgcgttgtca
gagacccaggatcctgaggaagtgtctgtcactgtgaaggccttcatgactgcagatctt
cctaacgagcttattgaactgttggagaaaatagttcttgataactctgtgttcagtgag
cacaggaatctgcagaaccttctaattcttacagctattaaggctgatcgcacccgtgtc
atggaatacatcaatcgcctggataactatgatgccccagacatagccaatatagctatc
agtaacgagctctttgaggaggcgtttgccatcttcaggaaatttgatgtcaacacgtca
gctgtacaggtattaatagagcacattggaaacctggatcgtgcgtatgaatttgctgaa
cgctgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaaggaatg
gtaaaagaagcaattgactcgtatattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaaataccttcagatggca
cgcaagaaggcccgggagtcgtatgtggaaacagaactaatctttgctcttgctaaaaca
aaccgtctagcagagctagaggagtttatcaatggacccaacaacgcacatattcagcaa
gttggcgatcgctgttacgatgaaaagatgtatgaagcagctaagctgttgtataacaac
gtgtccaactttggccgtttagcctcaactttagttcacctaggtgaataccaggcggct
gtggatggagctcggaaagcaaacagtactcgcacgtggaaagaggtctgctttgcttgt
gttgatggaaaagagttccgtctggcccagatgtgtggacttcatattgtagtgcatgca
gatgagttggaagagctaatcaattattaccaggatcgcggctactttgaagagctgata
actatgttggaagcagcacttgggcttgagcgagcacacatgggaatgtttacggagcta
gcaattctttactccaagttcaaaccacagaagatgagggagcacttggaactgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaggcccatctctgggctgaa
ttggtgttcttgtatgataagtatgaagaatacgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggacagttcaaagatatcattactaaggtggctaat
gtggagctgtattacaaggccgttcaattctatttggaatttaaacctctgttgcttaat
gatctgctgatggtgttgtcccctcggcttgaccatactcgtgctgttactttcttcacc
aaggttaaacagttaccactggttaagccttacttgcgttctgttcaaaatcacaacaac
aaatcagtgaacgagtccctgaacaaccttttcattattgaagaagactaccaggccctt
aggacttctatagatgcatatgacaactttgacaatatctctcttgctcaacgtttggag
aaacatgagctgatagagttccgaagaattgctgcgtatctcttcaaaggaaacaatcgc
tggaaacagagtgtagaactctgcaagaaagacagactgtataaggatgcaatgcaatat
gcttcagaatccaaagatactgagctggcggaagaattgttgcagtggttcttgcaggag
aacaagaaagaatgctttggtgcttgtctgttcacctgctatgatcttctaaggccggac
gttgtcttggaaacagcatggaggcacaacatcatggactttgccatgccatacttcatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtctttgagaaaggaagaggagcaagctacagaaacacaacctattgtt
tatggtcagccccagctaatgttgacagcaggacccagcgttgcagttcctccacaagca
ccttttggctatggctacactgcgcctccgtacgggcaaccgcagcctggctttgggtac
agcatgtaa
DBGET
integrated database retrieval system
