Aythya fuligula (tufted duck): 116497159
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Entry
116497159 CDS
T07966
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116497159 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116497159 (RABGEF1)
Membrane trafficking [BR:
aful04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116497159 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
116497159 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
GSH_synth_ATP
SSTK-IP
TNP-like_RNaseH_N
Motif
Other DBs
NCBI-GeneID:
116497159
NCBI-ProteinID:
XP_032056628
UniProt:
A0A6J3E555
LinkDB
All DBs
Position
20:5949650..5973656
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AA seq
531 aa
AA seq
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MNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRAGAKKAQEKI
VKQGHLGRERNADNILRDLKEIFTPSWELASPTEAEIQESKSPSPSINRQASIETDRVYK
EFIEFLKTYHKSGQDIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEKLQTRWKMP
PEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQMLCVPVNEE
IPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLI
YIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQED
FDRFMTGQTSPKKQESDSWSPDVCLGVKQMYKNLDLLSQLNERQERIVSEAKKLEKDLID
WTDGVAKEVQDIVEKYPLEIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaatctgaacgcagaggaattcacgttgatcagtcggagctcctgtgcaag
aagggatgtggttactatggcaatcctgcttggcagggcttttgctccaagtgctggaga
gaggaataccataaggccaggcagaaacagattcaagaggattgggagctggcagagcgg
cttcagcgtgaggaggaagaagcgtatgccagtagtcagagtacccaaggggcgcagtcc
ctgaccttttcaaaatttgaggagaagaaaaccaatgagaaaacacggaaggtcactact
gtgaagaagttcttcactgcttcctccagagcaggagctaagaaggctcaagagaaaatc
gttaagcaaggacatcttgggagggagcgaaatgctgataacattctcagggatttgaag
gaaatttttactccctcctgggaactggcttcccctactgaagcagagatccaagaatcc
aagtctcccagcccttctataaacaggcaggctagcatcgagacagatcgagtatacaag
gaattcatagaatttctcaagacatatcataaatcaggacaagatatctataagcaatgt
aaattatttttggacacaatgaatcataaaagggacttaagtattgaggagcaatctgaa
tgtgcccaggacttctatcaaaatgtagcagagaaattacagacacgctggaaaatgccc
cctgaaaaagttgagaaagcaatggatcagattgaaaaatacattatgactcgacagtat
aaatacgtattttgtcctgaaacaactgatgatgagaagaaggatctcgccgtccagaag
agaatcagggctttgcactgggtaactccacaaatgctgtgtgttcctgtcaatgaagaa
attccagaagtgtctgatatggttgtaaaagcaattacagatattattgagatggattca
aagcgtgtgcctcgtgataaattagcatgcatcaccaagtgcagcaagcacatctttaat
gctataaagatcacaaaaaatgaaccagcttctgctgatgactttcttccaacacttata
tatattgttttgaagggaaacccaccccgtctgcagtccaacatccagtatataacacga
ttctgtaatccaagcaggttaatgacaggagaagatggctactattttaccaatctgtgc
tgcgctgtggccttcattgaaaaactggatgctcagtctttaaatctaagccaagaggat
tttgatcgttttatgactggtcagacatccccgaagaagcaagaatctgacagctggtca
cctgatgtgtgcctgggtgttaagcaaatgtataaaaacttagatctcctgtctcagttg
aatgagagacaggaaagaattgtcagtgaagccaagaagcttgagaaagacctgatagat
tggactgatggagttgcaaaggaagtccaagatattgttgagaaatatccattagaaatt
aagccaaaaaatcaagccttagcagctattgactctgaaaacgtggaaaatgacaagctg
cccccaccactgcagcctcaggtttatgcaggataa
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