Aythya fuligula (tufted duck): 116497212
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Entry
116497212 CDS
T07966
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116497212 (VPS53)
Membrane trafficking [BR:
aful04131
]
Protein recycling
Others
EARP complex
116497212 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
116497212 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
Laminin_II
GrpE
Syndetin_C
hAT-like_RNase-H
COG3_N
NBD94
XhlA
FUSC
COG5_N
Tropomyosin
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
116497212
NCBI-ProteinID:
XP_032056739
UniProt:
A0A6J3E0Y1
LinkDB
All DBs
Position
20:8212541..8273719
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AA seq
831 aa
AA seq
DB search
MEEDEPELAAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI
DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKDITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRPGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPQEWCMTERIAVEFCHVTRTELSKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLGDGTVKKPEVPPPSTNPFLEDEAGTETDEIVIEKSDAEKPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSSGLTITSLLKEKEGSEV
AKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNS
IQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRK
YFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKA
PASYTRIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRS
EQSSMLDLFRQRLPAPPSGAESSGSLSLSAPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagcccgagctggcggccgggctggaggcggcgctggagctggcgccc
gccgtgcaggccgcgatcgagcaggtgttccccagccaagatcccctggacagagcagat
ttcaacgctgtggagtacatcaacactctctttcccactgagcaatctttggcaaacatc
gatgaagttgtgaacaaaatcagactgaaaataaggaggttggatgacaacattcgaact
gtagtgaggggacagacaaacgtgggacaggatggcaggcaggcactggaagaagctcag
aaagccatccagcaactctttggtaaaatcaaggatattaaagacaaggctgaaaaatca
gaacaaatggttaaagatatcacgcgggatatcaagcagctagatcatgccaagcgtcat
ctgaccacctccatcaccaccctcaatcacctgcacatgctggcaggaggagtggactca
ctggaggctatgaccaggaggagacagtatggggaagttgccaacctcctccaaggcgtt
gtgaatgtgttagagcacttcaacaaatacatggggattcctcagattcggcagctgtct
gaaagggtgaaggcagcgcaaaatgaattaggacagcagatcctggctgactttgaggaa
gcctttccttctcaaggtacaaagaggcctggtggacccagcaacgttctgcgtgatgcg
tgtctagtcgcaaatgtcctggatcccagaatcaaacaggaaatcatcaagaaatttatt
aaacaacacctctcggagtatctggtccttttccaagagaaccaagatgtcgcctggctg
gataagattgacaggcgctatgcttggataaaacgtcagctggtggactatgaggagaaa
tacgggcgcatgtttccccaggagtggtgcatgacagagcgcatcgctgtggagttttgt
cacgtcacaaggactgagctctcaaagataatgcgcacaagagcaaaggagattgaggtc
aaattgcttttgtttgcaattcagaggacaaccaactttgaaggacttctggctaaacgt
ttctcaggttgcactctaggtgatgggacagtgaaaaagccagaagtgcctcctccctct
accaacccatttctcgaggatgaagctgggacagagacagatgagattgtaattgaaaaa
agcgatgcagaaaaaccaaagaagccaaaggcccctgacaatcctttccatggcattgtt
tccaagtgctttgagcctcacctttatgtgtatatcgagtcccaggacaaaaatctcagc
gagctgatcgacaggtttgtggctgacttcaaggctcaaggtcctcccaagcccaacgtg
gatgaaggaggagccgtcctgcccagctgtgccgacctctttgtttactacaagaagtgc
atggtgcagtgctcccagctcagcacaggcgagcccatgatagccctgaccaccatattc
cagaagtaccttcgggaatacgcctggaaaattctgtctggaaacctgcccaagacaact
agcagcagtagcgggctcaccatcactagtttgctgaaagaaaaggaaggctctgaagtg
gcgaagtttactttagaagaactctgcctcatttgcagcatccttagtacagcagagtac
tgtctggcgaccacccagcagttggaagagaaactcaaagaaaaagtggatgcgagtcta
gtggagaggatcaacctgacgggagagacagacactttcagcatcgtgatctccaacagc
atacagctgttagtgcaggacctggatgcagcctgtgaccctgccctgactgcgatgagc
aagatgcagtggcagaacgtggaacacgttggcgatcagagtccttatgtcacctcggta
atcctccacatcaagcagaacgtccccatcatccgcgacaacctggcatccacgaggaag
tacttcactcagttctgcatcaagttcgcaaactccttcattcccaagttcattaaccac
ctcttcaagtgcaaacccattagcatggtgggagcagaacagctgctgctggacacccac
tccctgaagatggttctcctggatctgccttccattgggtcccaggtggtgaggaaggct
cccgccagctacacgcggatagtggtgaaaggcatgactcgggctgaaatgatcctgaag
gtggtcatggctccgcacgagcccccggttgtgtttgttgacaattacatcaagctcctt
gctgactgcagcactgacactttccagaagatactggacatgaagggcctgaagaggagc
gagcaaagcagcatgctggacctcttccgccagcgcctcccagcaccgccctctggagca
gagagcagcggctccctctcgctgagcgctcccacgccggagcaggagtcctctcggata
cggaaactggagaagctcattaaaaaaagactctaa
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