Aythya fuligula (tufted duck): 116497496
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Entry
116497496 CDS
T07966
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116497496 (CHD5)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116497496 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
116497496
NCBI-ProteinID:
XP_032057137
UniProt:
A0A6J3E6P9
LinkDB
All DBs
Position
21:6639725..6673058
Genome browser
AA seq
1953 aa
AA seq
DB search
MRGPAAGEGLPEEADNDEDVSEEDDGVLEGLDEFFPEEQVAVQKKKKSKKLKDSKAAKIK
RRKKEGSNDEISDNEEEIEEKSESEGSDYSPNKKKKKKLKEKKEKKTKRKKKDEEDDDND
DGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQSALPAVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSVRSECSAGLGKRGKRRRKKKRTEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDEDEEEEGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWTWKEPPAPLP
STLPAPDAELPLPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRK
NDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKK
GDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKK
LKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILAD
EMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKE
SRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLV
VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL
EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT
RNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGK
LMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDR
FNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI
YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDV
EGMVSQGQRIAMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKCSEIVSSDPNTPVPASPAHMHT
GPLTLAEKIETQLGFQEEKEQVEQKPKKVSDSQVPASAEKVESEEHQESCESKEKLKEEK
QEEGEKAEPSPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEIKPEDTKVEEKEQSETQ
QNGDKEEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHD
YWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALV
IEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVL
NQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQ
IYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggccggcggcgggcgaggggctgccggaggaggcggacaacgacgaggatgtc
tcggaagaagatgatggggtcctggaagggctggatgagtttttcccagaagagcaagtt
gctgtgcagaaaaaaaagaaatccaagaagctgaaagacagcaaggctgccaaaatcaag
aggaggaagaaagaggggagcaatgatgaaatatcagacaacgaagaggagattgaggag
aaatccgagagtgaaggaagcgattattcccccaacaaaaagaaaaagaaaaaactgaag
gaaaagaaagagaaaaaaacaaaacggaaaaagaaggatgaagaggacgatgacaatgat
gacggaggcctgaaggagcccaagagctcagcccagctgatggaagaatggggcctcgat
gatgtagattacattttctcagaagaagattaccatactctgactaattacaaggctttc
agccagtttctcaggcctctgatcgccaagaagaaccccaagatccccatgtccaagatg
atgactgtgcttggggccaagtggcgagagttcagcgccaacaaccccttcaagggcagc
tcagcggccgcagccgcggcagccgtcgctgcagcagtggagaccgtcactgttgctcca
ccgctggctgccagccctcagcagtctgccttgcccgctgtcatcaggaaagctaaaacc
aaggagggcaagggtccaggtgtgcggaagaaaatcaagggctccaaagatgggaagaaa
aaggggaaggggaaaaagatggcaggcttgaaattccggtttggaggaatccccagcaaa
aggaaaaagggctcctctagtgaagaggaagaacgggaggaatccgactttgacagtgcc
agcatcaacagctcctcagtgcgctctgagtgctcggctggcctggggaagagagggaag
aggaggagaaagaaaaagaggactgaagaaggggatggatacgagacagaccaccaggac
tactgcgaggtgtgccagcagggaggggagatcatcctgtgcgacacctgtccccgtgcc
taccacctcgtctgcctggaccccgagctggagaaggcccccgagggcaagtggagctgc
ccccactgtgagaaggaggggatccagtgggagccaaaggaggatgaggatgaggaagag
gaaggtggcgaagaagaggaggatgaccacatggagttctgccgtgtctgtaaggatgga
ggggagctgctgtgctgcgacacgtgcccgtcatcctaccacctgcactgcctgaacccg
cccctgcccgagataccaaacggtgaatggctctgccctcgctgtacatgccccccttta
aagggcaaggtgcaacgcatcctgcactggacctggaaggagccgccggccccgctcccg
tccacgctgccggccccggatgcggagctgcctctgccactgcccaaggtgctggagggc
atcccggagagggagttcttcgtcaagtgggcagggctctcctactggcactgctcctgg
gtcaaggagctgcagctggagctctaccacacggtgatgtaccgcaactaccaaaggaag
aacgacatggatgagccgccagccttcgactacggctctggggacgaggacagccagagg
gagaagcggaagaacaaggacccgcagtacgccaagatggaggagcggttctaccgctac
ggcatcaagcccgagtggatgatgatccaccgcatcctgaaccacagcttcgataaaaag
ggagacattcattacctgatcaagtggaaagatctgccgtatgaccagtgcacctgggag
atcgatgagatagacattccctactatgaaaacctcaagctcctctactggaatcacagg
gagctgatgctgggggaagacacacgccctctaaagaagctgaacaagaaagggaaaaag
ctgaaggaggagaaactagaaaagcctccagaaactcctcttgttgatcctacagttaag
tttgacaaacagccgtggtacatcgatgctacgggaggcacgctccatccttaccagctg
gaagggctcaactggctgagattttcctgggcccaagggactgatacaatcctggctgat
gagatggggctggggaagacggtgcagaccatcgtgttcctgtattccctgtacaaggag
ggccactcgaaagggccgtacctggtcagtgccccgctctccaccatcatcaactgggag
cgtgagttcgagatgtgggcgcctgacttctacgtggtgacctacacaggggacaaagaa
agccggtcggtcatccgggaaaatgagttctcttttgaagacaatgccatccgcagtggg
aagaaagtcttccggatgaagaaggaagcccaaatcaagttccatgtcctgctcacctcc
tacgagctgatcaccattgaccaggcggtgctgggctcgatagaatgggcctgtctggtg
gtggatgaagcacacaggctgaagaacaaccagtccaaattctttagagtattaaatagc
tacaagattgattacaagctgctgctcaccgggactccactccagaacaacttggaagag
ctcttccacttgctcaatttcctgactcctgagaggtttaataacctggaaggattcctg
gaggagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctgggt
ccccacatgctgcggcggctcaaggcggatgtcttcaagaacatgccggccaagacagag
ctgatagtgagagtggagctgagccaaatgcagaagaagtactacaagttcatactgaca
aggaattttgaagccctgaattccaaaggtggagggaaccaggtctcactgctcaacatc
atgatggatctgaagaagtgctgtaaccacccgtacctcttccctgtggctgctgtggag
gctccggttctgcccaatggatcttacgatgggaattctttggttaaatcttctgggaaa
ctgatgctgctccaaaagatgctgaagaagttacgggatgggggtcacagggttctgatc
ttctcccagatgacaaagatgctggacttgctggaggacttcctggagtacgaaggctac
aagtacgagcggatagatgggggcatcaccggaggcttgcgccaggaggccatagacagg
tttaacgctcctggtgctcagcagttctgctttctcctctctacccgcgccggtggtctg
ggcataaaccttgctacagccgacacagtcattatttatgattctgactggaatccccac
aatgacatccaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatgatc
taccgcttcgtgacgagagcctccgtggaggagcggatcacccaggtggccaaaaggaag
atgatgctcacccacttggttgtccgtcctgggcttggctcgaagtcgggctccatgacc
aagcaggagctggatgacatcctcaagttcgggacggaagagctcttcaaggatgatgtg
gaaggcatggtgtctcaggggcagcggatcgccatgccggatgctgtcacccctttctcc
gacacgctgtcaaccaaagggggtgcagtgactcctggcatgaaaaaaaagcacggtggc
acccctccaggtgacaataaggatgtggatgacagcagtgtgatccactatgacgatgct
gctatctctaagcttctggaccgaaaccaggatgcaactgatgacactgagctgcagaac
atgaacgagtatctgagctcctttaaagtggcccagtatgttgtgagagaagaggatggt
gtggaggaggtggaacgtgagatcatcaagcaagaggagaatgtggaccccgactactgg
gagaagctactgcggcaccactatgagcagcagcaggaagatctggccaggaacctgggg
aaagggaagagaatccgcaagcaggtcaattacaacgatgcctcgcaggaggaccaagag
tggcaggacgagctctctgacaaccagtctgagtactccattggctccgaggatgaggat
gaagactttgaagagagaccagaaggtcagagtggcaggagacaatcacgaagacagctg
aagagtgaccgagacaagcctcttcctcctctgctggcaagagttggggggaatattgag
gttctcgggttcaatgcccgtcagcgcaaggctttcctgaacgccatcatgcggtggggc
atgccgccccaggatgccttcaactctcactggctggtccgggatctgcgagggaagagc
gagaaggagttcagggcgtacgtctctctgttcatgagacatttatgtgaacctggagca
gatggtgctgaaacctttgcagatggcgttcctcgggaagggctgtcacggcagcacgtg
ctgactcggataggagttatgtcactagtaaggaagaaggtccaggagtttgagcacgtc
aacgggaagtacagcaccccagatctgatccttgaaggtccagagagcaagaagtgcagt
gagattgtttcttcagaccccaacacccctgtcccggccagcccagcgcatatgcacaca
ggacctcttacccttgcagaaaaaatagaaacacaacttggattccaagaggaaaaggaa
caagtggagcagaaacccaagaaggtgtctgacagccaggtgcctgcaagtgctgagaag
gtggaaagtgaagagcaccaagaaagctgtgaaagcaaagagaaactgaaggaagagaaa
caagaggagggtgaaaaggctgagccttctcctgagcctttagtgaaagatgagggaatt
caagaaaaagagaagcctttggaaaagccagagctgaacagtagtcctggtaaaggggag
gacaaagaaatcaaaccagaggataccaaggtggaagagaaggagcaaagcgagactcag
caaaatggtgataaagaagaagaggaggatggaaagaaggatgacagaaatgtgaacttc
agattcatgttcaacatcgctgacggtggctttacagagttgcacacgctgtggcagaat
gaggaaagagctgccatctcctccggcaagatctatgacatctggcaccgaagacacgac
tactggctgttggcaggaattgtcactcacggctatgcccgctggcaggacatccagaac
gacccgcgctacgtgattctgaacgagcccttcaagtcggagatacacaaggggaactac
ctcgagatgaagaacaagttccttgcccggcggttcaagttgctggagcaggccttggtg
atagaggagcagcttcggcgggctgcgtacctcaacatgactcaagaccccaatcacccg
gccatggcattgaacgcccgtctggctgaagtggagtgccttgctgagagccaccagcat
ctctccaaagagtccctcgctgggaacaagcctgcaaatgccgtcctgcacaaggtgctg
aaccagctcgaggagctgctgagcgacatgaaggccgacgtgacgcgcctgccctccatg
ctgtcccgcatcccgcccgtggccgcgcggctgcagatgtcggagcgcagcatcctgagc
cgcctcaccacccgcgggggagagcccccggtccagcagggctcctttggttcctcccag
atctacaacaacaactttgggccgaatttccgaggtcctgggcctggtgggattgttaac
tacagtcagatgcctctgggaccgtacgtgaccgatatttag
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integrated database retrieval system
