Aythya fuligula (tufted duck): 116497820
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Entry
116497820 CDS
T07966
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116497820 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116497820 (DDX6)
03036 Chromosome and associated proteins [BR:
aful03036
]
116497820 (DDX6)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116497820 (DDX6)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116497820 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
116497820 (DDX6)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116497820 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
116497820
NCBI-ProteinID:
XP_032057650
UniProt:
A0A6J3E226
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All DBs
Position
22:complement(5475297..5488497)
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AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcagaatgggcaa
ttgagaggccctgtaaaacccagcgggggcccaggaggtggaggcacacagactcagcaa
cagatgaaccagctgaaaaatgccaacacaatcaataatggcactcaacaacaagcacag
agtatgaccaccactattaaacctggtgatgactggaagaagactttaaaactccctcca
aaggatttgagaatcaaaacttcggacgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaaaccatct
cctattcaggaggagagcatccccattgctttatctggtagggatatcttggctagagcg
aaaaatggaacaggcaagagtggagcctacctcattcccttacttgaacggctagactta
aagaaggacaacatacaagcaatggtgattgttcccacccgtgaactagccctgcaggtc
agtcaaatctgtatccaagtcagcaaacacatgggaggtgccaaagtgatggcaacaaca
ggaggaaccaatttgcgagatgacataatgaggcttgatgatacagtgcatgtggtgata
gctacccctggcagaattctcgatctcatcaagaaaggagtagcaaaagttgagcatgtc
cagatgatagtattggatgaggcagataagttgctgtctcaagattttgtacaaataatg
gaagacattattcttacgctacctaaaaacagacagattttgctctactcagccactttc
cctctgagtgtacagaaattcatgaattcccatttgcagaaaccctatgagattaatctg
atggaggagttaaccttgaagggagttactcagtactatgcctatgtaactgagcgtcag
aaggttcattgcctcaatacactgttttccaggctccagattaaccagtcgatcattttc
tgcaactcctctcaacgggttgaattgttagccaaaaagatctcccagttgggctattcc
tgcttctatatccatgctaaaatgaggcaggagcaccgcaatcgtgtgttccacgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaacgtggtgataaactttgatttcccaaagctggcggagacttatctccat
cgtattggcagatcaggtcgctttggtcatcttggcctggccatcaacttgatcacctat
gatgatcgattcaacctgaaaagtattgaggagcagttgggaactgaaattaaacccata
ccaagcaacattgacaagagcctgtatgtggcagaataccacagtgaacctgtagaagat
gagaagcagtaa
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