Aythya fuligula (tufted duck): 116497821
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Entry
116497821 CDS
T07966
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04270
Vascular smooth muscle contraction
aful04625
C-type lectin receptor signaling pathway
aful04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116497821 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116497821 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
116497821 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116497821 (ARHGEF12)
Membrane trafficking [BR:
aful04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116497821 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Ribonuc_2-5A
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
116497821
NCBI-ProteinID:
XP_032057652
UniProt:
A0A6J3E726
LinkDB
All DBs
Position
22:4278261..4347750
Genome browser
AA seq
1545 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLAESEVDLAAFGHMCPVMTSPHSP
GTSGNTERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQSLQEEYSRSSSSRLLKEI
QETKKHITQLQEQLSKATGCTQDGVLSSRSVTESLQISEVEAESGDGLCKLDYSSDSPSR
PNSDIADSPRSGLKERVYLDESPEKTEVQDTDSQSSVGSPSSRIGPQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRTANLKVPVPDEISVDLDKRRPELIPEELHRHYIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQIIAKIEEVLMTSQPLEEEKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGDEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEIQKQRHPKHLPTASSVSPEPPDSGKMRQSGSSSDGTDAPYAP
ANPMSPLATGPFSSPEGSKDSEAGSKQTGEAPPANDCVDGTPRTPNNTFEFPSPLENLPE
EEGESERVVDMGTPKPFRKMDSVGFADVQSEDELYDFDTDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSDKRKIFSNLEDILGLHV
ALNDQMKAVRKRNETSVIDQIGEDLLSWFSGAAEEKIKHATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKA
ADHCRQVLNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMESTRRVI
PLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLDSSLILNAQTSSPTMSEKSE
VESLLVTERQFDKVQQADLTLKDTSTCYEHAATDLPSVSGGQWALDALRNLDLLKKLLVQ
QLGFSEKGTLEDRQRFPRFRTVSQEAQTESGSELGLQHSDDNKFHQPGTDRMLPRTETHE
STASYGLRTSAESPASGDAMQLIGRDPRSSSNSAIDRMSMNLEISTAELEGVGADESGEH
FFDAREAHSDENPSESELMERKEEEDVQIRISGNYLILDGYGTVQESSTDEEVSSLVLQC
TAGGHTSLDSAQQQPLSPRDTQSDGGSSPFAEEMLVSRWGGVEESCSVVASPHFLSLESR
VQMMQYIQKIENNLEKLKEVEEDYIILRRQGLAGSASTGEHSEKS
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaacctacaagacac
ggcagcattctgagcagagagtctccagctgacaagaagcagaaggttgaacgctgcagc
agcacacacgacttcgatccgacagatagctcctccaagaagacaaagtctagttcggag
gagagtagatccgagacgtatggtcttgttcagcggtgtgttattatccaacgggatgaa
aatggatttgggctgacagtcagcggagacaatccagtcttcgtgcagtccgtcaaagaa
gatggagcagccatgcgggccggagtgcaaacaggtgatagaattatcaaggtgaatggc
actcttgtaacacactcaaaccatttggaggtggtaaagctgatcaagtcgggttcctat
gtagctctcactgttcaggggcgcccaccagggtcgccccagattcccttggctgagtct
gaagtggatctggcagcgtttgggcatatgtgtcccgtcatgacatcgccccattcgcct
ggcacatcaggaaatacagaaaggattactagcccagtgcttatgggggaggagaataat
attgtccacaaccagaaggtggagattctgagaaagatgctacagaaagagcaggagcgg
ctgcagtctctgcaagaagagtacagccgatcgtccagctcacgactgctcaaagagata
caggaaacaaagaagcacattactcagctgcaggagcagctgtccaaagccacaggctgt
actcaggatggagttttgtcctccaggtcagtgacagaatcgctgcagatcagtgaagtg
gaggcagagagtggggatggtctgtgcaaactagattacagcagtgacagcccgtcccga
ccaaacagtgacatagctgatagtcctcgcagtggcctgaaggagcgggtttatctggat
gagagcccagagaagactgaggttcaagatactgattctcagtcaagtgttggaagtcct
tcgtcccgcatcgggcctcagatcattggagcagaggatgatgactttgacactgagcag
gagcagattaatggacagtgcagctgtttccaaaacattgagctcctgaagtctcgccca
gctcaccttgctgttcttctgcatcatgtggtgtcccagtttgaccctgcagcattgttg
tgctacctttacacagacctgtacaagcagaccaactccaaagagactcggcgtgtcttt
cttgaattttaccagttcttcttggaccgaactgcaaaccttaaagttccagttccagat
gaaatctctgtagatctagacaaaagaaggccagagctcattcctgaagagcttcatcgc
cactatatacaaactatgcaagataaagtttgtccagaagttcaaaggaatctggaagac
ttcaggcagaaacgtagtatgggattgaccctggcagaaggagagctgaccaagctggat
gcagaacgggttcgtgatcggaacgcggtggagaaggaaagagcatgtgcagaacagatt
attgccaaaattgaggaagtcttgatgacatctcagcctttggaggaagaaaagagttcc
acaatgcaatacgtgattcttacttacatgaagcacctgggagtcaaagttaaagagcct
cggaacctggagcagaagcgtggccgtattggtttcttgccaaagatcaagcaaagtatc
aagaaagagaaagaaggagatgaaaaaggaaagagaagaggctttccgaatattctcggc
ccaccaaggagaccaagccgacacgacagcagtgcaattggcagagccatggaaatacag
aagcagcgccatccaaagcacttacctacagcgtcttctgttagcccagaaccaccagat
tctggcaagatgcgccagagtgggtcctccagtgatggaacagacgcaccctacgcacct
gccaacccaatgtctcctttggcaacgggtcccttttcatctccagagggaagcaaggac
agtgaagcaggctcgaagcagactggagaagcaccacctgctaatgactgtgtggatggc
acaccccgcacacctaataatacttttgaattcccatctcccttggaaaacttgccagag
gaggagggagaatctgagagagttgtcgacatgggaacaccaaagccttttcgcaagatg
gacagtgtcggttttgcagatgtacaaagtgaagatgagctgtatgattttgacacggac
atggaccctcccaactggcagcagcttgtgagccgggaagtgttgatggggctgaaaccc
tatgaaatcaagcgccaagaagtgattaatgagctgttttacaccgagagagctcacgtc
cgtactctgaaggttctacataatgttttctaccagcgtgtcacccgggaagggatcctg
aactccagtgacaagcggaaaatcttttcaaatctggaagatatccttgggcttcatgtt
gcattgaacgatcagatgaaagcagtccgaaaaaggaacgagacttctgtcattgaccaa
attggggaggacttgctttcttggtttagtggagcagcagaggagaagataaaacacgca
actgccacgttctgcagtaaccagccctttgctctagaggtcataaagtcgcgtcagaag
aaggattcccgtttccagacttttgtgcaggatgctgagagtaatccactgtgtcgccgg
ttgcagctgaaggatatcattcccacagagatgcagaggttgactaagtacccccttctg
ctggataacattgctaagtacacagaactgcctgaagagaaagagaaagtgaagaaagct
gcagatcattgtcgtcaggttcttaaccacgtgaaccaggctgtcaaggaatctgagaac
aagcagcatttggaagattatcagcgtcgtcttgacctctcctacttgaagcagtctgag
gatcccatgatggatgagttcaggaacttggatctaacaaagagaaaaatgcttcatgaa
ggacctctaacttggaaggttaatcgtgacaaaactattgatctctacactctgctcctg
gaggacatcctggtgctgctgcagaaacaggatgataaactggtcttgaagtgtcacagt
aaaatcttggcatcaacagctgatagcaaacacaccttcagtcctatcatcaagctgaac
actgttctggttcgtcaggtggcaacagataacaaagctttcttcgtcatctccatgtca
gaaaatggcgctcatatttatgaactggtggcacagacggtttcagagaagaatgtgtgg
caggaccttatagctcagatggcagggactgtgaaaatggagagcaccagaagagtgatt
ccattaccgcagtcgggacctggcgaagaagagcgtgaagaagaggagcagcagaagctc
aaagagcagcatgacattcctgccagtagtctgcaaagtccagacaaagatttgggccta
gactcttccttgatactgaatgctcagacttcttcgcccaccatgtccgaaaagtcggag
gtagaaagccttcttgtgacagaaagacagtttgataaagtgcagcaggcagacctgacg
cttaaagatacttctacatgttatgaacacgcagccaccgatttaccgtcggtatcagga
gggcagtgggcattggatgccttaaggaacttggacttgctgaaaaaactgttggtacag
cagcttggcttttctgagaaggggacccttgaagaccggcagcgctttcccaggtttagg
accgtctctcaagaagcccagacggagagtggaagtgagcttggactacagcactctgac
gataacaaattccaccagcctggaacagaccgcatgcttccaagaaccgaaactcatgaa
tccacagctagttatggcctccggacttcagctgaatcaccagcttcaggggatgccatg
cagctgatagggagagaccccagatcgagtagtaactcagcaatagaccgcatgagtatg
aatctggagatctcaaccgcagagctggaaggggtgggtgctgatgagagcggggagcat
ttttttgacgctcgagaagctcacagtgatgaaaatccatctgaaagtgaactaatggaa
aggaaggaagaggaggatgtgcaaatacggatctcaggaaattatttgatccttgatgga
tatggaacagtgcaggagagctccacggatgaggaggtatcatctctagttctccagtgc
actgcaggtggccacacctctttggactctgcccagcagcagcctctttccccacgggac
acgcagtcggatggaggaagctccccgtttgccgaggagatgctggtctcgcgctggggg
ggagtggaagagtcctgctcagttgtagcaagccctcacttcttgtctttagagtcgcgt
gtgcagatgatgcagtatattcagaagatagagaacaaccttgaaaagttgaaggaggtt
gaggaagactacatcatcctccgtcgccaagggctggctggatcagcctccacaggagag
cactcagagaagagctag
DBGET
integrated database retrieval system
