Aythya fuligula (tufted duck): 116497909
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Entry
116497909 CDS
T07966
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116497909 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aful01009
]
116497909 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aful04515
]
116497909 (PCDH9)
Protein phosphatases and associated proteins [BR:
aful01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116497909 (PCDH9)
Cell adhesion molecules [BR:
aful04515
]
Cadherins
Protocadherins
116497909 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
MAP17
V_ATPase_I
RCR
EphA2_TM
Big_9
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
116497909
NCBI-ProteinID:
XP_032057834
UniProt:
A0A6J3E3Z7
LinkDB
All DBs
Position
1:167877319..168617009
Genome browser
AA seq
1203 aa
AA seq
DB search
MDLRDFYLLAALTACLRLDSAVAQELIYTIREELPENIPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKVVTLSILNDNENFVLDPFSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPSDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH
LPDGSQESCSDSGLGDHEPVGGGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSD
GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGSYQQPKSPLSTFAPQKEWVKKDKLV
NGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNTGNHMTDIPLANLKSYKQASGAVESPKE
HQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctttgactgcctgtttaaggctggattct
gctgtagctcaagaacttatttacactattagagaggagctgcctgaaaacattcccata
ggaaacataccaaaggacctgaacatttctcatatcaatgctgccacagggaccagtgcc
agccttgtctacagactcgtgtctaaagcaggggatgcccctctggtcaaagtgtccagt
accaccggggaaatctttacaacatctaacagaatagacagagaaaaactttgtgctggc
gcttcctatgcagaagaaaatgagtgcttctttgaacttgaagtggtgattctccccaat
gattttttcaggttgatcaaaataaaaataattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccataccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgatacaggtttcaacggtgtacagcactacgag
ttgttgaatggacagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcaactgattgtgcagcagaacttggatagagagcaaaaggacacctatgtgatg
aaaatcaaagtggaggatggaggaaccccacagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtttttaaagagagtcaagtagaggtccat
ataccagaaaatgcccccgtaggcacctccgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgccaccaaa
agattttttgctttaaacaataccacagggctgatcacagttcagaggtccttagatcgg
gaagagactgctattcacaaagtgaccgtgctggctagcgatggtagctctacaccagct
cgggcaaccgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcagtttatgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctccttttttgatctggatcgaaag
acgggagttttaacagcctccagagtttttgacagagaagaacaggaacgattcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtattggatgaaaatgacaacagtcccaaatttactcataatcactttcagtttttt
gtatcagagaacctaccaaagtatagcactgtgggagtgatcacggtgactgatgcagat
gctggggaaaataaagtggtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccattctctggagttataaaatccaatgtttcttttgatcgagaacagcagagctcc
tacacctttgatgtgaaggcagttgatggaggacaacctcctcgctcttctacagcaaaa
gtaaccataaatgtaatggatgttaatgataacagtcctgttgtcatttacccgccttct
aatacttctttcaagttagtgccactctcagcaattccaggatcagtggtagcagaagtg
tttgctgtagatattgacaccggaatgaatgccgaactgaagtacacaatagtaagtgga
aataacaagggtttgtttcggatcgatccagtgacaggtaatatcactctggaagaaaaa
ccaactcctagtgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccttgcatactcttgtgcttgtatttttgtatgtgaatgatactgctggaaat
gcctcttatatttatgacttaatacgcaggactatggaaacacctttggaccggaacata
ggggacagtagccaaccctaccaaaatgaggactatctcacgatcatgattgctattgtg
gcaggtgcaatggttgttatagtggtgatttttgtcacggttctcgttcgctgccggcat
gcatccagattcaaagccgcacagaggagcaagcaaggtgctgaatggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaagaaagaaaaggaaatctccaaagagttct
cttttgaacttcgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaatcagccttccagcagagctggaggagcaaagtataggaagatttgactgg
ggcactgcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccacgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccctttacacaccagacagtcccagcgccgtgttacatttcac
ctccccgatggctcccaggaaagctgcagtgacagtggtttgggagaccacgaaccggtg
ggtggtggaaccctgatctcacaccctctccctctggttcagccgcaggatgaattctac
gaccaggcctcaccggacaagaggactgaagctgatggcaactctgaccccaactcggat
gggcctctagggccacgaggattagctgaagctacggagatgtgcacgcaagaatgcctg
gttttgggtcactcagataactgttggatgcctcccagcttgggatcgtaccaacagcca
aagtctcctctctctacctttgcacctcagaaagaatgggttaagaaggacaaactagtt
aatggacacacattgaccaggacctggaaagaagatagcaacagaaaccagttcagtgac
cgaaagcagtatggttccagtgagggccacttcaacactggtaatcacatgactgacatt
cctctggccaatttgaagtcttataaacaggcctcgggagctgttgagagtccaaaggag
caccagctataa
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integrated database retrieval system
