KEGG   Aythya fuligula (tufted duck): 116498085
Entry
116498085         CDS       T07966                                 
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful03082  ATP-dependent chromatin remodeling
aful03083  Polycomb repressive complex
aful04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:aful00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116498085 (RBBP4)
   03083 Polycomb repressive complex
    116498085 (RBBP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    116498085 (RBBP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aful03036]
    116498085 (RBBP4)
Chromosome and associated proteins [BR:aful03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     116498085 (RBBP4)
  Histone modification proteins
   HAT complexes
    HATB complex
     116498085 (RBBP4)
   HDAC complexes
    Sin3A-HDAC complex
     116498085 (RBBP4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     116498085 (RBBP4)
    PRC2.2
     116498085 (RBBP4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     116498085 (RBBP4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116498085 (RBBP4)
  Chromatin remodeling factors
   NuRD complex
    116498085 (RBBP4)
   NuRF complex
    116498085 (RBBP4)
   NuRF complex (fruit fly)
    116498085 (RBBP4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 116498085
NCBI-ProteinID: XP_032058198
UniProt: A0A6J3E9Y5
LinkDB
Position
23:6501135..6509264
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcggacaaggaagcagcctttgatgatgcggtggaggaacgtgtgatcaacgaagag
tacaaaatatggaagaagaatactcccttcttgtacgatttggttatgacccacgctctg
gagtggcccagcctgactgcgcagtggctgccggatgtcacaagacctgagggcaaagac
ttcagtattcatcggttagtgctgggcacccatacttcagatgaacaaaatcatctcgtg
atagctagcgtgcagttgccgaatgacgacgcgcagtttgatgcttcgcactatgatagt
gagaaaggagagtttggaggctttgggtcagttagtggaaaaattgaaattgaaatcaag
ataaatcacgagggcgaagtgaacagagcgcgttacatgccacagaacccctgcatcatt
gccacaaagactccatccagcgatgtcctcgtctttgattacaccaaacacccttctaag
ccagacccttctggagagtgtaaccctgatctgcgtcttcgtggacaccagaaagaaggt
tatgggctgtcatggaacccaaacctgagtgggcatttgcttagtgcttctgatgatcat
actatttgcttgtgggatattagtgctgttccaaaagaaggtaaagtggtggatgcgaag
accatcttcacagggcacacagcggtagtggaagacgtgtcttggcacctgctccatgaa
tctctttttggatctgttgctgatgatcagaagctcatgatctgggatacgcggtcaaac
aacacctccaaacctagtcactcggtggatgctcatacagctgaagtcaactgcctctct
ttcaatccctacagcgagtttatcctggctacaggatcagctgacaagactgtcgcgtta
tgggacttgaggaacttaaaactgaagttgcactcctttgaatcccataaagatgagata
tttcaggttcagtggtctccccataatgaaactatattggcctccagtggcactgaccgc
aggctaaatgtttgggacttgagtaaaattggagaagaacagtcccctgaggatgctgaa
gatggtcccccagagctattgtttattcatggtggtcatactgcaaagatatctgatttc
tcgtggaatcccaacgaaccctgggtaatctgttctgtatcagaagataatatcatgcaa
gtctggcaaatggcagagaacatatacaatgatgaagatcctgaaggaagcgtggatcca
gaaggtcaaggatcctag

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