Aythya fuligula (tufted duck): 116498457
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Entry
116498457 CDS
T07966
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116498457 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116498457 (SMARCD2)
03036 Chromosome and associated proteins [BR:
aful03036
]
116498457 (SMARCD2)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116498457 (SMARCD2)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116498457 (SMARCD2)
PBAF complex
116498457 (SMARCD2)
GBAF(ncBAF) complex
116498457 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
116498457
NCBI-ProteinID:
XP_032058631
UniProt:
A0A6J3E4Q9
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Position
24:complement(6024786..6039394)
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AA seq
456 aa
AA seq
DB search
MGPAAAQYQRPGMPPGGRMPMAGLQVGPPGAPPYGAASPLRPGLPQSMMDPFRKRLLAPQ
SQPPMASQRRGVKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEA
IKKPLTQKRKLRIYISNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKS
LVIELDKELYGPDNHLVEWHRLPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDP
RLARLLGVHTQTRASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFNCVRMRFSEIPM
KLAGLLQHPDPIIINHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIAS
LDAKIHETIESINQLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRA
EFYQQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggggcccgcggccgcgcagtaccagcgccctgggatgcctccaggtggccggatgccc
atggcggggctgcaggtgggcccaccgggagcacccccatatggagcagcctccccgctg
agacctggcctgccgcagtcgatgatggacccgttcaggaagcgtctgctggccccccag
tcacagccgccgatggccagccagcggagaggggtgaaaaggaggaagatggctgacaag
gtcctgccacagaggatccgggagctggtcccagaatcccaggcctacatggacctcctt
gcctttgagcgcaagctggaccaaaccatcgctcggaagaggatggagattcaggaggcc
attaagaaaccgctgacgcaaaagcggaagctgaggatttacatctccaacactttcacc
ccagccaaagaagaaggggagggtggtgagcgtgtggcctcctgggagctacgtgtggag
ggcaaactgctggaggacccaagcaagcagaagaggaagttctcctcctttttcaagagc
ctcgtcatcgagctggacaaagagctgtatgggccagacaaccatctggtggagtggcac
cgactgcccacgacccaggagactgatggtttccaagtgaagcgtcctggtgatgtcaat
gtgaagtgcaccctgctgctcatgctggatcaccagccaccacagtacaaactggaccct
cgcctggctcgcctgctgggggtgcacacccagacccgtgccagcatcatgcaggcgctc
tggctctacatcaagcacaacaagctgcaggacagtcacgagaaggaatacatcaactgc
aaccgctacttccgtcagatctttaactgtgtccgcatgcgcttctctgagatccccatg
aagctggcagggctcctgcagcacccggatcccatcatcatcaaccacaccatcagcgtg
gatcccaatgaccagaagaagacggcctgctatgacatcgacgtggaggtggatgaccct
ctgaaagctcagatgagcaacttcctggcttccaccaccaaccagcaggagatcgcctcc
ctggatgccaagatccacgagaccattgaatccatcaaccagctgaagacacagcgtgac
ttcatgctgagcttcagcaacaacccgcaggacttcatccaggaatggatcaaatcccag
aggagggacctcaaaatcataacggatgtgattgggaaccctgaagaggagcggcgagct
gagttttaccagcaaccctgggctcaggaggctgtgggcagacacatcttcgccaaggtc
cagcagcgtcggcaggaactggaacaagtgcttgggatccgcctcacttaa
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