Aythya fuligula (tufted duck): 116498584
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Entry
116498584 CDS
T07966
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116498584 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aful04054
]
116498584 (DHX58)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116498584 (DHX58)
Pattern recognition receptors [BR:
aful04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
116498584 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_11
TTRAP
Motif
Other DBs
NCBI-GeneID:
116498584
NCBI-ProteinID:
XP_032058810
UniProt:
A0A6J3E9N5
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All DBs
Position
24:complement(2766857..2771375)
Genome browser
AA seq
675 aa
AA seq
DB search
MELRGYQHEAVAPALRGRNSIIWLPTGAGKTRAAVYVCLKHLESRQDGRVAVLVNKVHLV
EQHAKEEFHVLQGTFRVTAISGDSSHKCFFSQVVKHSDIVICTAQILHNALLSREEDTRV
ELTDFSLLVIDECHHTHKEAVYNKIMLNYLQRKLDGQRDLPQILGLTASPGTGGKTSFEG
AVEHILQICANLDTEVITSAQEHAQNLQRQVPQPRKQYDVCEERALDPFGQRLKKIMAQI
QQHMGTTGLPQDFGTQTYEQQVVELEKRAAERFCRKTRACALHLRKYNDALLINDAVRMI
DAFQHLQQFYAMERDMKDPTERFLATTFEENRASLLALTGCQLYENPRLSKLEEILRENF
QPQGSSRGIVFTKTRQSAHSLLSWLQDATALSGQHIRAAVLTGAGYSNQTRHMTQNEQQD
VIRQFRRGDLNLLFSTSVAEEGLDIPKCNIVVRYGLMTNEIAMVQARGRARAENSVYSVL
AKANSREVSREQLNENLVELMERAIREVQAMPEHEYRLKIAELQQNAVIGWQVKEAKISE
RRQLHDPDDVYFYCVNCNVAVCCGSDIRTVEGMHHVNINPSFRRYYTVSLRKISFPRTFK
DWEPGRRVMCSGCRQEWGMEMIYQHVKLPILCIKNFVVETPAEKRRYKKWSSVTFPVKEF
DYVEYCSSTQEDESF
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgcgggtaccagcacgaagccgtggccccggccctgcgtggccgcaacagc
atcatctggctgcccacgggggctggcaagacccgtgccgccgtctacgtctgcttgaag
cacctggagagccgccaggacggcagggtggccgtgctggtcaacaaggtgcacctggtg
gagcagcacgccaaggaggagttccacgtcctgcagggcaccttcagggtgacggccatc
agcggggacagcagccacaagtgcttcttcagccaggtggtgaagcacagcgacatcgtc
atctgcacggcccagatcctgcacaacgccctgctgagccgggaggaggacacgcgcgtg
gagctgacggatttctccctgctggtgatcgacgagtgccaccacacgcacaaggaggcc
gtctacaacaagatcatgctgaattacctccagcgcaagctggacgggcagcgggacctg
ccgcagatcctgggcctgacggcgtctcccggcaccggggggaaaacgtccttcgagggg
gccgtggagcacatcctgcagatttgcgccaacctggacaccgaggtgatcacgtcggcg
caggagcacgcgcagaacctgcagagacaagtgccccagcccaggaagcagtacgacgtg
tgcgaggagagagcattggaccccttcggccagcggctgaagaagatcatggcgcagatc
cagcagcacatggggacgacggggctgccccaggacttcggcacgcagacctacgagcag
caggtggtggagctggagaagagagcggccgagaggttttgccgcaagacgcgggcgtgc
gcgctgcacctgcgcaagtacaacgacgccttgctgatcaacgacgcggtgcgcatgatc
gacgccttccagcacctgcagcagttctacgccatggagagggacatgaaggaccccact
gagcgcttcctggccaccacttttgaggagaacagggcgagcctgctggcgctcactggg
tgccagctctacgagaaccctcggctgagcaagctggaggagatcctgcgggagaacttc
cagccccagggctcttctcggggcattgtcttcaccaagacccggcagagcgcccacagc
ctgctcagctggctgcaggatgcgaccgcgctgagcgggcagcacatcagggcggctgtc
ctcaccggggccggctacagcaaccagaccaggcacatgacgcagaatgagcagcaggac
gtgatcaggcagttccgcagaggagacctcaacctgctcttctccaccagcgtggccgag
gagggcctggacatccccaagtgcaacatcgtggtgcgctacgggctgatgaccaacgag
atcgctatggtgcaggcccggggccgtgcccgtgccgagaacagcgtttactctgtgctg
gccaaagccaacagcagggaggtctcccgggagcagctcaacgagaacctggtggagctc
atggagagggccatccgggaggtgcaggccatgcccgagcatgagtaccgcctgaagatc
gcggagctgcagcaaaatgccgtcatcggctggcaagtgaaagaagccaagatcagcgag
aggcggcagctgcacgacccggacgatgtttacttctactgtgtcaactgcaacgtggcc
gtgtgctgcggcagcgacatccgcaccgtggagggcatgcaccacgtgaacatcaacccc
agcttcaggcgctactacacggtctcgctgcggaaaataagcttcccgcggacgttcaag
gactgggagcctgggcgccgcgtcatgtgcagcgggtgcaggcaggagtggggaatggag
atgatctaccagcacgtcaagctgcccatcctctgcatcaaaaactttgtggtggagacc
ccggctgagaagaggaggtacaagaagtggagcagcgtgacgttccccgtcaaagagttt
gactacgtggagtactgctccagcacccaggaggacgagtccttctag
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