KEGG   Aythya fuligula (tufted duck): 116499142
Entry
116499142         CDS       T07966                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful03020  RNA polymerase
aful03420  Nucleotide excision repair
aful04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:aful00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116499142 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116499142 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    116499142 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aful03021]
    116499142 (POLR2E)
   03400 DNA repair and recombination proteins [BR:aful03400]
    116499142 (POLR2E)
Transcription machinery [BR:aful03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     116499142 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     116499142 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     116499142 (POLR2E)
DNA repair and recombination proteins [BR:aful03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116499142 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 116499142
NCBI-ProteinID: XP_032059668
UniProt: A0A6J3EED3
LinkDB
Position
26:complement(585182..587759)
AA seq 210 aa
MDDDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDTPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgatgaggagacataccggctgtggaagatccgcaaaaccatcatgcagctg
tgccacgaccgcgggtacctggtgactcaggacgagctggaccagacgctggaggagttc
aaggcgcagttcggtgacacccccagcgagggccgcccgcgccgcaccgacctcacggtg
ctggtggcgcacaacgacgaccccacggaccagatgttcgtcttcttccccgaggagccc
aaggtcggcatcaagacgatcaagatgtactgccagcgcatgcaggaggagaacatcacc
agggcgctgatcgtggtgcagcagggcatgacgccctcggccaagcagtccctggtggat
atggctcccaagtacatcctggagcagttcctgcagcaggagcttctgatcaacatcacg
gaacacgagttggtcccagagcatgtcgtcatgacaaaagaagaagtaaccgagctgctg
gccagatataagctgagagagaaccagctcccgaggatacaggctggggatcctgtggcc
cggtacttcgggataaagcgaggacaggtggtgaagatcatacgacccagtgagactgcg
ggccgctacatcacctacaggctggtgcagtga

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