Aythya fuligula (tufted duck): 116499486
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Entry
116499486 CDS
T07966
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116499486 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116499486 (LSM1)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116499486 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
116499486 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
116499486
NCBI-ProteinID:
XP_032060128
UniProt:
A0A6J3EFN2
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Position
27:complement(4824608..4826776)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRLELQAKQESEKLKVQALKER
GLAVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccgggcacggccagcctcatccaggacatcgacaagaagcacctggtg
ctgctgcgcgacggccggacgctgatcggcttcctgcgcagcatcgaccagttcgcgaac
ctggtgctgcaccagaccgtggagcgcatccacgtgggcaagaagtacggggacatcccc
cggggcatcttcgtcgtcaggggcgagaacgtcgtcctgctgggggaaatagacctggag
aaggagagcgacacgccgctgcagcaggtctccatcgaggagatcctggaggagcagcgg
ctggagctgcaggccaagcaggagtcggagaagctgaaggtgcaggcgctgaaggagcgg
ggcctcgcggtgccgcgcgcggacaccctggatgagtactaa
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integrated database retrieval system
