Aythya fuligula (tufted duck): 116500470
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Entry
116500470 CDS
T07966
Symbol
MEX3C
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116500470 (MEX3C)
04121 Ubiquitin system [BR:
aful04121
]
116500470 (MEX3C)
Enzymes [BR:
aful01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116500470 (MEX3C)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116500470 (MEX3C)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116500470 (MEX3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
Prok-RING_4
KH-I_KHDC4-BBP
RING_XB3-XBAT31
zf-C3HC4
KH_2
KH_DEAH11_2nd
zf-RING_UBOX
ATG43
zf-C2HC5
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116500470
NCBI-ProteinID:
XP_032061406
UniProt:
A0A6J3ECH5
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All DBs
Position
Z:1821873..1834176
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AA seq
649 aa
AA seq
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MTPAPPAVTGVCSLVAEAIDESWREIYRVQEGSEHLPHVHVEPSELGEQRNKAEVKNPKP
FLITKRLPSRCSPDPLGSSGLKSGVMLESRSEPAAVQEAEEGDLELDEEEEELEGEEEEE
EEEEEEEEPAALLPPSSSPSLPPLPPPPPSLLPGLGSVLLSPAFDAREAAAAALYGAGEP
RGMMAAGLPPAYSNDGGGGGGGGGGGAAATSGEQAALLRRKSVNTTECVPVPSSEHVAEI
VGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMAKREILSAAEHFSMIRASR
NKNGPALGGLPCTPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDK
EPVFEVTGMPENVDRAREEIEMHIAMRTGNYIELNEENDFHYNGTDVSFEGGALGSAWLA
SNPVPPGRARMISNYRNDSSSSLGSGSTDSYFGSNRLADFSPTSPFSAGNFWFGETLPSV
GAEELGADSPAYDSFPPPAQTIWSPFEPVNPLGGFANEPTGTAKPQRRGSQPSTPRLSPT
LAESLEHPLARRARSDDPPGAALPVSIPAFSNGTNSYSSSNGGSTSSSPPESRRKHDCVI
CFESEVVAALVPCGHNLFCMECANKICEKETPSCPVCQTAVTQAIQIHS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggctcctcctgcagttaccggggtctgcagtttggtggcggaggcaatcgat
gagtcttggcgtgagatttatcgtgtccaggagggcagcgagcaccttccccacgtgcac
gtcgagcccagcgagctcggagagcaaagaaataaggccgaggtgaaaaaccccaagccc
tttttaattacaaagcggctgccctctcgctgctcgcccgatccgctcggaagcagcggg
ttaaaaagcggggtgatgcttgaatccagaagcgagcctgctgccgttcaagaagccgag
gagggagacctggagctggacgaggaggaggaggagctggagggggaggaagaagaggag
gaagaagaagaggaggaggaggagccggctgcgctgctgccaccctcctcctcgccctcg
ctgcctcctcttcctcctcctcctccttctctgctgccggggctgggctcggtgctgctg
tcgccggctttcgatgcccgggaggcggcggcggcggcgctgtacggggcgggcgagccg
cggggcatgatggcggcggggctgccccccgcctacagcaacgatggaggaggtggtgga
ggaggaggaggagggggagcagccgccaccagcggcgagcaggcggcgctgctccgccga
aaaagcgtcaacaccaccgagtgtgtccccgtgcccagctccgagcatgtggccgagatc
gtggggcgccagggttgcaaaatcaaagcgctgagggccaagacgaacacgtacatcaag
acccccgttcgcggcgaggagcccgtcttcgtcgtcaccggccggaaagaggacgtagcc
atggccaaaagggaaatcctctcggccgccgagcacttctccatgatccgagcgtcgcgg
aacaagaacggccccgccttgggaggtttgccctgtacccccaacctgcccgggcagacc
acggtgcaggtcagggtgccttatcgcgtggtggggctggtggtgggaccgaaaggagcc
accatcaaaaggattcagcagcagacccacacctacatcgtcacccccagccgggacaag
gaacccgtcttcgaagtgacggggatgccggagaacgtggaccgggcccgcgaggagatc
gagatgcacatcgccatgcggacgggcaactacatcgagctgaacgaggagaacgatttc
cactacaacgggaccgacgtcagcttcgagggaggcgccctgggctccgcctggctcgct
tccaaccccgtcccccccggccgcgccaggatgatctccaattacaggaacgacagctcc
agctccttgggaagcggctccaccgattcctatttcggaagcaatagattggctgacttc
agccccaccagtcccttcagcgcgggcaacttttggttcggagaaacgctgccttccgtg
ggcgccgaagagctcggggccgactcgcccgcctacgactccttcccgccgccagcccaa
accatttggagccctttcgaacccgtcaaccccctgggcggcttcgccaacgagcccacg
ggcaccgccaagcctcagcgccgcgggagccagccctccacccctcgcctgtcgcccacc
ttggcggaaagcctggagcaccccttggcgaggcgagcgaggagcgacgatccccccggc
gccgctctgcccgtctccatcccggctttttccaacggtaccaacagctactcctcttcc
aacgggggctccacctccagctcgcccccggagtcgaggcgcaagcacgactgcgtcatc
tgcttcgagagcgaagtggtggccgccctggtcccctgcggccacaacctcttctgcatg
gagtgtgccaacaagatctgcgagaaggaaacgccctcctgtcccgtttgccagacagct
gttactcaggcaatccaaatccactcttaa
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