Aythya fuligula (tufted duck): 116500494
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Entry
116500494 CDS
T07966
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116500494 (TAF1C)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
116500494 (TAF1C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
LCE
Motif
Other DBs
NCBI-GeneID:
116500494
NCBI-ProteinID:
XP_032061436
UniProt:
A0A6J3ECK2
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All DBs
Position
Z:10803824..10807853
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AA seq
936 aa
AA seq
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MEFPAALFPSYFGCGPPKDEAGPAPAAGWGEHGQVLEAGSGQLQPPFVPRRSRQGESWEP
CEAAAVPLLPPNDSCWVPPLVPQDILYRGVLRRKLRAGRSGAALDFTKQLGHFFVDHPED
AFGSLGQLLHKNFHLGDSKLKKPSRDTTIRMTALVEELNRLEARRGCPRRHFVSRLRWFS
HLCRDWLFEVPLGLLADCVHEELLLQWAGLLFDDSPTGGALAWLPPQEASGRVGRLVYPG
GEVMNYLYFQDVVLEEQPRARGAPAQFELNGRIRQVGAARVDGEDFVGVRSDYHCGVWRV
PGRAGAAPSPLQVIRTDVPASCLTVSPHLPGELAVCTQSGAVYLWSVETGLQRLRHDPQT
LFFRDHSPWRWSDFTAHPRVLSCADRTGIQCLDTRAPSSCHFDFFKVGEEAGCQQGERVV
LPMYLGRAHPCQHLVTTQFAVYLMDERLPLVPVLKWAHMMKAPPLFAQVAPGGPGRSHKV
VLGASRTQELLLLQYTGERAAQGGGSKSACQLVGPPQRLQSIASCLPHLPTQLPHRHHWL
QQRLGAPAAGLAAVQHQQGRQEALVVFQLSEAGDVFYQALRHEAAPAPAPRREEEEEATQ
EAPGSSPLFSSEEEAQEEEEEDEGEQTFYLSNLEVIINDEEEEEVVGTPVATEEAEPPAE
RRASPQPPPAVPSPAAALRYRRWLRALLRVWGGSPRHACPPGPPTISKRRLFTRKELAAP
AAPSALHQQLRQRLRQAMRLGERIQRWDTAPEPPGPPPPPPQEPDALSARLTAAWGGEWG
SGGAGASLAQRRQALRERRRRQKAARAHRSLSASFTSSVTYQSELSELSDAGPPRSSPPA
TPLEVVVGGSPPAAPSPPPPVEPMLSSQELRSRGIPKERRRTLRDYLAVWAEGPQDPPEP
PSTPGAPLCIPSSQSQLSSSSSSSQPLRRKRPRMGF
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggagttccccgccgctctcttcccttcctatttcggctgcggcccccccaaggatgag
gccggccccgcgccggctgccggctggggggagcacgggcaggtgctggaggccgggagc
gggcagctgcagccgccgttcgtgccccgccgcagccggcagggcgagagctgggagccc
tgcgaagccgctgccgtgcccctgctgccacccaacgacagctgctgggtgccccctctg
gtcccccaggacatcctgtaccgcggcgtgctgcgcaggaagctgcgggcagggaggtcg
ggagccgcgctggacttcaccaagcagctgggacacttctttgtggatcacccagaggac
gccttcggctccctggggcagctgctgcacaagaacttccacctgggtgactccaagctg
aagaaaccctcccgggacaccaccatccgcatgacagccctggtggaggagctcaaccgg
ctggaggccaggcgcggctgcccacggcgtcacttcgtctcccgcctgcgctggttctcc
cacctgtgccgggactggctcttcgaggtgccactggggctgctggccgactgcgtgcac
gaggagctgctgctgcagtgggccggcctgctcttcgacgacagccccaccgggggggct
ctggcctggctgcccccccaggaggcgagcggccgcgtgggacgcctggtctaccccggc
ggggaggtcatgaattacctctatttccaggacgtggtgctggaggagcagccccgtgcc
cgaggggccccggcgcagtttgagctcaacgggcgcatccggcaagtgggtgccgcgcgg
gtggatggagaagattttgtgggtgtccgctccgactaccactgcggagtttggagggtg
ccgggcagggcgggcgctgcccccagcccgctgcaggtcatccgcaccgacgtgccggcc
tcctgcctcaccgtcagcccacacctccccggggagctggctgtctgcacccagagcgga
gccgtctacctctggagcgttgagactgggctgcagcggctccgccacgacccccagacc
ctgtttttccgggaccactcgccctggcgctggagcgacttcaccgcgcacccacgggtg
ctgagctgcgccgaccgcaccggcatccagtgcctggacacccgggccccctccagctgc
cacttcgacttcttcaaggtgggcgaggaagccgggtgccagcagggcgagcgcgtggtg
ctgcccatgtacctgggccgggctcacccctgccagcacctcgtcaccacccagtttgcc
gtgtacctgatggacgagcgcctgccgctggtgcccgtgctgaagtgggcgcacatgatg
aaggccccccctctttttgcccaagtggcgccgggggggccgggcaggagccataaggtg
gtgctgggcgcctcccgcacgcaggagctgctgctgctgcagtacacgggtgagagagca
gcacagggggggggcagcaagtcggcctgccagctggtggggccgccgcagaggctgcag
agcatcgccagctgcctgcctcacctccccacacagctcccacaccgccaccactggctc
cagcagcgcctcggtgcccccgctgccgggctggccgccgtgcagcaccagcagggccgg
caggaggccctggtggtcttccagctctccgaggccggggatgtcttctaccaggcgctg
aggcacgaggcggcgccagcacccgctccccgccgggaggaagaggaggaggcgacgcag
gaggccccgggctcttccccgctgttcagcagcgaggaggaggcgcaggaggaggaggag
gaggatgaaggagagcagaccttctacctctccaacctggaggtgatcatcaacgacgag
gaggaggaggaggtggtgggcacgccggtggccacggaggaagccgagccccccgcggag
cgccgcgccagcccccagccccctccagccgtgcccagcccggccgctgccctgcggtac
cgccgctggctgcgggccctgctgcgggtttgggggggctccccgcgtcacgcctgcccc
ccgggaccccccaccatcagcaagcggcgcctcttcacccgcaaggagctggcggcaccc
gcggcacccagcgccctgcaccagcagctgcggcagcggctgcgccaggccatgcgcctc
ggggagcgcatccagcgctgggacacggcccccgagccccccggacccccgccaccaccc
ccgcaagagcccgacgccctgagcgcccggctgacggcggcttgggggggcgagtggggg
tctgggggcgcgggtgccagcttggcacagcggcggcaggcgctgcgggagcggcggcgg
cggcagaaggcggcgcgggctcaccgcagcctctcggccagcttcacctcctccgtcacc
taccagtccgagctgtccgagctcagcgacgccggacccccgcgctcgtcccccccggcc
acccccttggaggtggtggtggggggctccccgccggccgccccctccccgccgcccccc
gtggagcccatgctgtcctcgcaggagctgcgctcgcgggggatccccaaggagcggcgg
cgcacgctgcgggactacctggccgtgtgggcagaggggccccaggacccccccgagccc
cccagcacgccgggggcgccgctctgcatcccctcctcccagagccagctctcctcctcc
tcctcctcctcgcagcccctccgccgcaagcgcccgcgcatgggcttctga
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