Aythya fuligula (tufted duck): 116500568
Help
Entry
116500568 CDS
T07966
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04137
Mitophagy - animal
aful04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116500568 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116500568 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116500568 (VCP)
03009 Ribosome biogenesis [BR:
aful03009
]
116500568 (VCP)
04131 Membrane trafficking [BR:
aful04131
]
116500568 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116500568 (VCP)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116500568 (VCP)
Ribosome biogenesis [BR:
aful03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116500568 (VCP)
Membrane trafficking [BR:
aful04131
]
SNARE
SNARE associated proteins
Others
116500568 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116500568 (VCP)
Exosome [BR:
aful04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116500568 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
116500568
NCBI-ProteinID:
XP_032061552
UniProt:
A0A6J3EI08
LinkDB
All DBs
Position
Z:complement(10229330..10251273)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattctaaagcggatgacttatcgactgcaattctgaagcagaag
aacaggcccaatcggttaattgttgacgaagccatcaatgaagacaacagtgttgtgtca
ctgtcccaggcaaaaatggatgagttgcaactgttcagaggagatactgttctgctaaaa
ggaaagaagaggagggaagcagtctgcattgttctgtcagatgatacctgctcagatgag
aagattcgcatgaacagggttgttcgcaataacctgagagtgcgcctgggtgatgtgatc
agcatccagccctgcccagatgtgaaatatggcaaacgtatccacgtgctgccaattgat
gacacagtagaagggatcacggggaatctgtttgaggtctatctcaagccatacttcctg
gaagcatacagacccatcaggaaaggtgacatcttcttggtgcgtggaggaatgcgtgcg
gtggaattcaaagtggtggagacagatccaagtccctactgcatagtggctccagacaca
gtgatccattgtgaaggagagcccatcaaacgagaggatgaagaagagtccctgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcagatcaaagagatggtg
gaacttcccctccgacaccctgcgctcttcaaggccataggggtgaagcctccacgtggc
atcctgctgtatggtcctcctggcactggtaaaacactgattgcccgagcggtggccaac
gaaactggggccttcttcttcctgatcaatggtcctgagatcatgagcaagctggctggt
gagtctgagagcaacctgaggaaagcatttgaagaagcagaaaagaacgctcctgccatc
atcttcattgacgaactggatgccattgctcctaagagagagaagacacatggagaggtg
gaacgtcgcatagtgtctcagctgttgactcttatggatggattgaaacagagagcacat
gtgattgttatggcagctaccaacagacctaacagcattgacccagcactcaggcgattt
ggtcgttttgacagagaggtagatattggtatcccagatgcaactgggcgcctggagatc
ctgcaaatccacacaaaaaatatgaaactggctgacgatgtggatctggaacaggtggca
aacgagacccatggacatgttggtgctgacttggctgctctttgctcagaagctgctctt
caggctattagaaagaagatggatctcatagacctagaagatgaaaccattgatgctgaa
gtgatgaactcactggctgtgaccatggatgacttcaggtgggctctgagccagagcaac
ccttctgctcttcgggagactgtggtagaggtgccacaagttacctgggaagatattggt
ggtctagaagatgtaaagagagagctccaggagcttgtacagtatcctgtggagcaccca
gacaagttcctcaaatttggcatgactccatcaaaaggggttctgttctatgggccacct
ggttgtggtaagacgcttctggccaaagccattgccaatgaatgccaggcaaacttcatt
tccatcaagggcccagaattgcttaccatgtggtttggagagtctgaagccaacgtgcgc
gagatctttgacaaggcccgccaagcagccccttgcgtgctcttctttgatgagctggac
tccattgcgaaggctcgaggtgggaacatcggagatggcggcggtgctgcagaccgtgtc
atcaaccagatcctgacagagatggacggcatgtccaccaagaagaacgtcttcatcatc
ggtgccaccaacaggccggacatcattgacccagccatcttgcgccctggccgcctggat
cagctcatctacatccctctgcctgacgagaagtcccgggtggctattcttaaggccaac
ctgaggaaatcaccagttgctaaggatgttgacctggatttcctagctaagatgaccaac
ggcttttcgggggctgacctgacagaaatttgccagcgtgcctgcaaactggccatccgc
gagtccatcgagagtgagatcaggcgagagcgtgagaggcagaccaacccttctgccatg
gaggtggaggaggacgacccggttcctgagatacgcagggatcactttgaggaggccatg
cgctttgctcgccgctctgtcagtgacaatgacatcaggaaatacgagatgtttgcacag
actctacagcagagccgtggctttggcagcttcaggttcccatcaggaaaccagggaggt
gctggtccaagccaaggcacaggaggtggcagcgggggcaacgtgtacagtgaagacaat
gatgatgatctctacggttaa
DBGET
integrated database retrieval system
