Aythya fuligula (tufted duck): 116501151
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Entry
116501151 CDS
T07966
Symbol
THBS4
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04145
Phagosome
aful04510
Focal adhesion
aful04512
ECM-receptor interaction
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116501151 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116501151 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116501151 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116501151 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116501151 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116501151 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
aful00536
]
116501151 (THBS4)
Membrane trafficking [BR:
aful04131
]
Endocytosis
Phagocytosis
Opsonins
116501151 (THBS4)
Exosome [BR:
aful04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116501151 (THBS4)
Exosomal proteins of colorectal cancer cells
116501151 (THBS4)
Exosomal proteins of bladder cancer cells
116501151 (THBS4)
Glycosaminoglycan binding proteins [BR:
aful00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116501151 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
116501151
NCBI-ProteinID:
XP_032062465
UniProt:
A0A6J3EKL4
LinkDB
All DBs
Position
Z:complement(24460479..24499470)
Genome browser
AA seq
953 aa
AA seq
DB search
MGWDGGAALLLLPLALQLCPGRAAPPAPRVIDLLSYSNKRVVTNFLQQALGDPTLNEVFL
LSTFKLQPKSTATIFGLYSSTGNSKYFEFTVVGRMNKVVLRYLKSDGRLNSVIFSNIQLA
DGKPHAVILWLSGLQQESSTIELYLDCLQVGAIQDLPKAFSTLPERSAAVELHIFQKKPQ
DTLDELKLVTGGTLAQVGNLQDCFLQQIEPASQYNGDFNRQLMSQMMQMNQILGDVKDLL
RQQVKETTFLRNTLAECQACGLGTVNFPTPIPRHSKPKCEPSSCFRGVRCMETAEGFQCG
PCPEGLTGNGVTCSDIDECRYSPCFPGVRCVNTVPGFRCETCPPGYTGQTVQGVGLSYAK
SNKQICLDIDECQNGGHGLCVPNSHCINTLGSYHCGQCKSGYTGDQVRGCQAERSCRSRA
LNPCSVHARCIEERRGEVTCICGIGWAGDGYICGKDVDIDGYPNEELSCPAESCRKDNCK
FVPNSGQEDADGDGVGDACDEDADGDGIPNDQDNCVLIPNVNQRNSDQDIFGDACDNCRN
VLNNDQRDTDGDGKGDACDDDMDGDGIKNLLDNCQRIANQDQEDKDNDGVGDACDSCPTV
SNPNQSDIDNDLVGDSCDTNQDSDGDGHQDSTDNCPTIINSSQLDTDKDGLGDECDEDDD
NDGIPDLLPPGPDNCRLVPNPGQEDDNGDGVGDICESDFDQDTVIDRIDVCPENAEITLT
DFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVN
TVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEH
LRNSLWHTGDTSDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQIGYIRARFYEGSDLVADS
GVTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQAQQFGVGDI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggggtgggatggcggcgctgccctgctgctgctgcccctcgccctgcagctgtgcccg
ggccgcgccgcgccgcccgccccccgagttattgatcttctttcatattccaacaagaga
gtggtgacaaacttcctgcaacaagcacttggcgatcctacgctgaatgaagtgttcttg
ctctcaacattcaaactgcagccaaagagcacagccaccatatttggcctgtattcatca
actggaaacagcaagtattttgagtttacagtagtgggacggatgaataaagtggtactt
cgttatctgaagagtgatgggaggttgaactcagtgatttttagcaacatccagctggct
gatgggaaaccccatgctgtcatcttgtggctgagtggtctgcagcaggaatcaagcaca
atagagttgtatctggactgtctgcaagtaggtgccattcaggacctgccaaaagcattt
tcaactctgcctgagaggtcagcagcagtagaattgcacatcttccagaagaagccacag
gatacactggatgagctgaagctggtaaccggaggaacacttgcccaagtggggaacctg
caggactgttttcttcagcaaattgaacctgcttctcagtacaatggagattttaatagg
cagctgatgagccagatgatgcagatgaaccagatactgggtgatgtgaaagaccttctg
agacaacaggtcaaagaaacgacttttttgagaaataccctagctgagtgccaggcatgt
ggtttgggaactgtgaattttccaactccaatccctaggcacagcaaacccaaatgtgaa
ccaagttcctgcttcaggggagtcaggtgcatggagacagctgagggatttcagtgtggc
ccctgccctgaagggctcacagggaatggagtgacatgttcagatattgatgagtgccgt
tacagcccttgcttccctggagtgcgttgtgtgaacactgttccaggtttccgatgtgag
acctgtcccccaggatatacaggacaaactgtgcaaggtgtgggactcagctatgccaag
agcaataagcagatctgcttagatattgatgaatgtcagaatggcgggcatggactctgt
gttccaaattcccattgtattaacactttgggttcttatcactgtggccagtgcaaatca
ggatacacaggagaccaagtcaggggatgccaggctgagagaagctgcagaagtcgagcc
ctcaatccatgcagtgtccatgcccggtgcattgaggaacggagaggggaggtgacatgc
atttgtggcattggctgggctggtgatggttatatttgtggaaaagatgttgacattgat
ggctacccaaatgaagagctctcttgccctgctgaaagctgcagaaaggacaactgcaaa
tttgtcccaaactctgggcaggaagatgctgatggtgatggggttggagatgcctgtgat
gaagatgcagatggagatggcattcccaatgaccaggataactgtgtcttgattcccaat
gttaaccagagaaatagtgaccaagatatcttcggagatgcttgtgacaactgccgcaat
gtcctgaataatgaccagagggacacagatggtgatgggaaaggagatgcttgtgatgat
gacatggatggtgatggtattaagaaccttttggataattgtcagaggatcgccaaccaa
gaccaggaggacaaggataatgatggtgttggtgatgcctgtgacagctgccctacagtc
agcaacccaaaccagtctgatatcgacaatgacctggttggagattcgtgtgataccaat
caggacagcgatggtgatgggcaccaggacagcacagacaactgccccaccatcattaac
agctcccagctggacaccgataaggacgggctgggtgacgagtgtgatgaggatgatgat
aacgatggcattcctgacctcctgccccctggccctgacaactgcaggctggtccccaac
ccagggcaggaagatgacaatggtgatggagttggggatatctgcgagtctgattttgac
caggatacggtaattgatcggatcgatgtctgccctgagaatgcggagatcaccttgaca
gactttagggcctaccagacagtagtgctggacccagagggagatgcgcagattgatccc
aactgggtggttctaaaccagggcatggaaatcgtgcagaccatgaacagtgatcctggc
cttgctgttggttacacagcttttaatggtgttgactttgagggcactttccacgtgaac
acggtgacagacgatgactacgctggttttatttttggctatcaagacagctctagcttt
tacgtggtaatgtggaaacagacggagcagacgtactggcaggcgactcccttcagagct
gtggcagagcccggcattcagctaaaggctgtgaaatcaaagacaggccctggtgagcac
ctccgcaactccctctggcacacgggggacaccagtgaccaggtcagactgctgtggaag
gacccccggaacgtcgggtggaaggacaaggtctcctaccgctggttcttgcagcacaga
ccccagattggatatatcagggcaagattttacgaaggctctgacctagtggcagactct
ggtgtcactatagacaccacgatgcgtggaggacggcttggagttttctgcttctctcag
gaaaacatcatctggtccaacctgaaataccgctgtaatgacaccattccagaggacttt
caagaatttcaagctcagcaatttggagttggggatatttaa
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