Aythya fuligula (tufted duck): 116501371
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Entry
116501371 CDS
T07966
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116501371
03036 Chromosome and associated proteins [BR:
aful03036
]
116501371
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116501371
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
116501371
SLIK complex
116501371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
ResIII
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
116501371
NCBI-ProteinID:
XP_032062770
UniProt:
A0A6J3ELJ3
LinkDB
All DBs
Position
W:complement(16285292..16377965)
Genome browser
AA seq
1672 aa
AA seq
DB search
MNGHSDEERVRNSSGESSQSDDDSGSTSASGSGSSSGSSSDGSSSQSGSSDSESGSESSS
QSESESDTSGEKKQVQAKPPKIDGSEDLSSSEDSAGDSSSETKKKRHRDEDWQMSGSGSV
SGTGSDSESEEDREKSSCEESESDYEPKNKVKSQKPPRRIKPKNGKKNAGQKKRQLDSSD
DDDDDYDKRGSRRQATVNVSYKEAEEAKTDSDDLLEVCGEDVLQPEEDEFETIEKFMDSR
IGRKGATGAATTIYAVEADGDPNAGFEKSKEPGEVQYLIKWKGWSHIHNTWETEETLKQQ
NVKGMKKLDNYKKKYQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQVVERIIAHSNQK
SAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQACIDEYFSRNQSKTTPFKDCKILKQRP
RFVALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLN
YLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQT
KRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLI
TGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKD
VEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH
CYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILA
EYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVI
FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMD
TTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEEEPQEMDIDEILKRAET
RENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPEQNLRSWEEIIPEVQRRRLEEEERQ
KELEEIYMLPRMRNCAKQISFNGNEGRCSRSRRYSGSDSDSVSERKRPKKRGRPRTIPRE
NIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALR
DNAFGQERSGGGLGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPLDPEERKRYVIP
CHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQ
LQTRADYLIKLLNKDLARKEAQRLASAGNSKRRKTRSKKSKATKAAKIKEEIKSDSSSPP
SEKSGEDNEVNEIKSENKEKNKKVPSLDIPVHITATSEPVPISEESEELDQKTFSVCKER
MRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYPNPEQIKQWRKNLWI
FVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTQVIRNPDVERIKENTNHDD
SSRDSYSSDRHLSQYHDHHKDRHQGAAYKKTDSRKRPYSAFSNGKDHREWDHYKQDSRYY
SDSKHRKLDDHMSRDHRSNLEGSLKDSRPYSDHHSHSDHRMHSDPCSISEYSHHKSSRDY
RYHSDWQMDHRASGSGSRSPLDQKSPYGSRSPFEHSSDHKNTPEHTWSSRKT
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaacgtgtaagaaacagtagtggagagtcaagccagtca
gatgatgattctgggtcaacatcggcttctggatctggttcaagctctggaagcagtagt
gatggaagtagcagtcagtcaggtagcagtgattctgagtctggttcagagtccagcagt
cagtcagaatcagaatctgacacatctggagagaagaaacaggttcaagctaaaccacca
aaaattgatggatctgaggatttatcaagcagtgaagattctgcaggtgactcatccagt
gaaaccaaaaagaaaagacatagagatgaagactggcaaatgtctgggtcagggtcagta
tcgggaactggttctgattctgaatcagaggaagatagagagaaaagcagttgtgaagag
agtgaatctgactatgagccaaaaaacaaggtcaaaagccagaaacctccaaggagaatt
aagccaaaaaatggtaaaaagaatgcaggacagaaaaagaggcagcttgattcatcagat
gatgatgatgacgattatgacaagagaggatctcgtcgccaggcaacagtcaatgttagt
tacaaagaagctgaagaagctaagacagattctgatgacttgctggaagtttgtggagaa
gatgtcctgcagcctgaagaagatgaatttgaaactatagagaagtttatggatagtcga
attggccgaaaaggagccactggtgctgcaaccactatctatgcagtcgaggcagatggt
gacccaaatgctggttttgaaaagtcaaaggagccaggagaagttcagtatcttattaaa
tggaaaggttggtcacacatacataatacttgggaaactgaggaaaccctgaagcaacaa
aatgttaaaggaatgaagaaactggacaactataagaaaaagtatcaggaaacaaaacga
tggctgaaaaatgcttctccagaagatgtggaatattataactgccagcaggaacttaca
gatgatctacataaacaatatcaagtagtggaaaggataattgctcattcaaatcagaaa
tcagcagctggttatccagattactattgcaaatggcagggtctgccttactcagaatgt
agctgggaagatggtgctctcattgccaaaaaatttcaggcatgtattgatgagtatttt
agcagaaatcagtccaagaccactccatttaaggactgcaagattcttaaacagaggcca
aggtttgttgcactaaagaagcagccatcttatattggaggacatgagagtttagagtta
agagattatcagttaaatggactgaattggcttgctcactcatggtgcaaagggaatagt
tgtattcttgcagatgaaatgggtctgggaaaaacaatacaaacaatttcttttctgaac
tacctgttccatgaacatcaactgtatgggccttttttgctggtcgtgccactttctacc
ttgacgtcttggcaaagagagattcaaacttgggctcctcagatgaatgctgtggtttac
ttaggagatataactagcagaaatatgattagaactcatgaatggatgcatccacagacc
aaacgattaaaatttaatatacttctaacaacttatgaaattttgctgaaggataagtca
ttccttggtggtctgaattgggtgtttataggggttgacgaagctcatcgtttaaaaaat
gatgattcccttctgtacaagactttaatagacttcaagtctaatcatcgtcttcttatt
actggaacccctctgcaaaactccctcaaagagctttggtctttgctgcacttcatcatg
ccagaaaagttttcttcctgggaagattttgaagaggagcatggcaaagggagagagttt
ggttatgcaagtcttcacaaagaacttgaaccgtttctactcagaagagttaaaaaagat
gtagaaaagtctttacctgctaaggttgagcaaattttgaggatggaaatgagtgcatta
cagaagcaatattacaagtggattttaaccaggaattataaagccctgagtaaaggatca
aaaggcagtacctcaggctttttgaacatcatgatggaactcaagaagtgttgtaaccat
tgctacctcattaaaccaccagatgataatgaattctataataaacaggaggccttacag
catttaatacgaagcagtgggaaactaatccttcttgacaagctactgattcgtctacga
gaacgtggcaacagagtactgattttctctcagatggtgaggatgctagacatcctagca
gaatatttgaagtatcgtcaatttccttttcagagacttgatggatcaataaaaggggaa
ttgaggaaacaagcactggatcattttaatgcagaaggatcagaggatttctgctttttg
ctgtctaccagagctggaggattaggtataaacttggcatctgctgacactgtagttata
tttgattctgactggaatccacaaaatgatctgcaagcgcaggctagagctcataggatt
ggacagaaaaaacaggttaatatttatcggctagtcacaaaaggatcagtagaagaagat
attcttgaaagagccaagaaaaagatggtgttagatcacttagtgattcagagaatggac
actacagggaaaactgtactacatacaggctctactccttcaagctcaacaccttttaat
aaggaagagttatcagcaattttgaagtttggtgctgaggaactctttaaagaacctgaa
ggggaggaagaggagcctcaggaaatggatatagatgaaatcctgaagagggctgaaact
cgagaaaatgagccaggcccattaactgtaggagatgagttactttctcagttcaaggta
gctaacttttccaatatggatgaagatgacattgaattggaaccagaacaaaatttaaga
agttgggaagaaatcattccagaagtccagcggcgacgattagaagaggaagaaagacaa
aaagaacttgaagaaatatatatgctcccaagaatgaggaactgtgcaaaacagattagc
tttaatggaaatgaagggagatgcagtaggagcagaagatattctggatctgatagtgac
tctgtctcagaaagaaaacgaccaaaaaaacgtggacgaccacgaactattcctcgagaa
aatattaaaggatttagtgatgcagagattagacgatttatcaagagttacaagaaattt
ggtggcccacttgaaaggttagatgctatagctagagatgctgagctagttgataaatcg
gaaacagaccttagacgtctgggagaacttgtacataatggatgcattaaggctttaagg
gacaatgcctttggacaagaaagatcaggaggtggacttgggaaggttaaaggcccaaca
ttccgaatatcaggagtgcaggtgaatgcaaagctagtcatctcccatgaagaagagttg
gcaccattgcacaaatccattcctttagatccagaagaaaggaaaagatatgtcatccca
tgccacaccaaggcagctcattttgatatagattggggtaaggaagatgattccaatctg
ttaataggtatctatgagtatggttatggcagctgggaaatgataaaaatggatcctgat
ctcagtttgacgcagaagattttacctgatgatccggacaagaaaccccaggccaagcag
ttacagacccgtgcagactacctcattaaattactgaataaagaccttgcaagaaaggaa
gcacagagacttgctagtgcaggcaattcaaagaggaggaaaacaagaagtaagaagagt
aaagcaacaaaggctgcaaaaataaaagaagaaataaaaagtgactcctcgtcaccaccc
tcagaaaaatctggtgaagataacgaggtaaatgaaatcaaatctgaaaataaagaaaaa
aataaaaaagttccatcgttggatattccagttcatattactgcaactagtgaaccagtt
cctatatctgaagaatctgaagaactggatcagaagacattcagtgtgtgcaaagaaaga
atgaggcctgtcaaagcagcattgaaacaactggatcgaccagagaaaggcctttctgaa
agggaacagctagaacatactagacagtgcctaatcaaaattggggaccatattactgaa
tgtctaaaggagtacccaaatcctgaacaaattaaacaatggagaaaaaacttgtggatt
tttgtctccaagtttacagaatttgatgccagaaagctgcacaaactgtataaacatgca
atcaaaaaacgccaagaatctcagcaacataatgatcagaacattagcagcaatgtgaat
acacaagtaattagaaatccagatgttgaaagaattaaagagaatacaaaccatgatgac
agtagcagggacagttattcttctgatagacatttgtcacaataccatgatcatcataag
gacaggcatcagggagctgcttataagaaaactgactctaggaaaaggccgtattcagcc
ttcagcaatggaaaagatcatagagagtgggatcactacaaacaagacagcagatactat
agtgatagtaaacataggaagttggatgaccacatgagcagagatcacaggtcaaaccta
gaaggaagtttaaaagatagtaggccttattcagatcaccattcccattcagaccacagg
atgcattcagatccctgttcaatttcagagtacagccatcataaatcttccagagattat
aggtaccactcagactggcaaatggaccacagagcttctggtagtggctcaaggtcacca
ttagatcagaagtctccttatggttcaagatctccatttgaacactcatcagatcacaaa
aatacacctgaacatacatggagtagccgaaaaacataa
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