Aythya fuligula (tufted duck): 116501524
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Entry
116501524 CDS
T07966
Symbol
SAMD4B
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116501524 (SAMD4B)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116501524 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
SMG1
Motif
Other DBs
NCBI-GeneID:
116501524
NCBI-ProteinID:
XP_032063010
UniProt:
A0A6J3EM87
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MMFRDQVGIVAGWFKAWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCADIHLLEA
EANSAAAISQWPQEPAEAAVALLLAHLPLLQPGNAAAKAEYMKRLQKVLAYAIESNRCVE
ESRQLLSYALIHPATTLDDRSALALWLGHLEERLAGAPPAPPLRPDAAAAAAPPAPPPPP
PPPPPPPPPPPRRAPHDWPEHGPPEIGPPWPEAAPRENGHPPFHPPPAAGSGGNGLGGAA
LPCQLHPSPLKRSLSLVPGSPQGGGGEWPGGGGEEPGAPPPPPRPPFGEHAPLSPQSSVA
SSGSEQTEEPPGGRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEHHLE
SQNVTKGARHKIALSIQKLRERQSVLKALEKDILEGGNLWTALQELQQIMVTPIKAFRPP
PAPPANTSAPPDAAAAPPGAADAFAPHPAADPEAPAAPVPDGDIPGQFTRVMGKVCTQLL
VSRPDEENITSYLQLLEKCLSHEAFTETQKKRLLSWKQQVLKLLRAFPKKVPLEGPGYRP
PKGWAFGSNSLPIAGSVGGGAGGRRGQRPFALPPRALPPTRLGLLGPAGGGPAPRPPLGG
PPPPLGAQGRQSLWFGSGGAAGRSAVQRTHSLPVHPSPQALLAFPQECPLPGTDLEINPT
LESLCLSMTEHALGDGTDKTSTI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaggtggggatcgtggccggctggttcaaggcttggaacgagtgc
gagcagaccgtggcgctgctctcgctcctcaagcgcgtcacccgcacccaggcgcgcttc
ctgcagctctgcctcgagcactcgctggccgactgcgccgacatccacctcctcgaggcc
gaggccaacagtgccgccgccatcagccagtggccccaggagccggcggaggcggcggtg
gccctgctgctggcccacctccccctcctgcagccgggcaacgccgccgccaaggccgag
tacatgaagaggctgcagaaggtgctggcctacgccatcgagagcaaccgctgcgtggag
gagagccgccagctcctctcctacgccctcatccaccccgccaccaccctggacgaccgc
agcgccctggccctgtggctgggccacctggaggagcgtttggccggcgccccccccgcg
ccccccctgcgccccgatgccgccgccgccgctgcgcctcccgccccccctccgcccccc
cccccgccaccgcccccacccccgccgcccccccggcgcgccccccacgactggcccgag
cacgggccccccgaaatcgggcccccgtggcctgaggcggccccccgggagaacgggcac
cccccgttccaccccccccccgccgccggcagtggtgggaatgggctggggggcgcggcg
ctgccctgccagctgcaccccagccctctgaagcgctccctgtcgctggtgcccggcagc
ccccagggagggggtggcgagtggccggggggggggggcgaggaaccgggggcccccccc
cctcctcctcgcccccccttcggcgagcacgcccccctgtcgccgcagagcagcgtggcc
tcgtcgggcagcgagcagaccgaggagccccccggcggccgcaacaccttccaggaggac
ggcagcggcatgaaagatgtcccctcgtggctgaagagcctgcggctgcacaagtacgcg
gcgctcttctcgcagatgacctacgaggagatgatgacgctgaccgagcaccacctcgag
tcgcagaacgtcaccaagggcgcgcggcacaagatcgccctcagcatccagaagctgcgg
gagcgccagagcgtcctcaaggcgctggagaaggacatcctggaggggggcaacctgtgg
acggcgctgcaggagctgcagcagatcatggtgacgcccatcaaggctttccggcccccc
ccggccccccccgccaacaccagcgccccccccgacgccgctgccgcccccccgggggcc
gccgacgccttcgccccccacccggctgccgaccccgaggcccccgcggccccggttccc
gacggggacatcccggggcaattcacccgggtgatgggcaaagtgtgcacccagctgctg
gtgtcgcggccggacgaggagaacatcaccagttacctccagctcctcgagaagtgcctg
agccatgaggcgttcacggagacgcagaagaagaggctcctctcctggaagcagcaggtc
ctgaagctgctccgcgccttccccaagaaggtgccgctcgagggcccgggctaccgcccc
cccaaaggctgggccttcggctccaactcgctccccatagctggctctgtgggggggggg
gcgggggggcggcgggggcagcgccccttcgcgttgcccccccgcgcgctgccccccacc
cgcctggggctgctgggccctgcgggggggggcccggccccgcgaccccccctcggcggc
cccccccctcccctcggcgcccagggccgccagagcctgtggttcggcagcgggggggcc
gcagggcgcagcgcggtgcagcgcacccactcgctgcccgtccacccctcgccccaggcc
ctgctcgccttcccccaggagtgccccctccccggcaccgacctggagatcaaccccacg
ctggagtcgctgtgcctgagcatgacggagcacgcgctgggggacggcacagacaagacc
tcgaccatctga
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