Aythya fuligula (tufted duck): 116501531
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Entry
116501531 CDS
T07966
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116501531 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116501531 (EXOSC5)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116501531 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116501531
NCBI-ProteinID:
XP_032063017
UniProt:
A0A6J3EMB3
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MAAAGCCLRPFSCEQGLLSRPDGSAAFVQGDTSVLAGLYGPAEVRGSKESPERATLEVLL
RPKVGLPGVGERSREQLLRQTCEAVVLGALHPRTAITLVLQVLSDAGSLLSCCLNAACMG
LLDAGLPLSALFCGVTCALDAQGAIVLDPTTRQEQEARAVLTFAIDSTEKKVLMATTRGS
CSVEEMQQCLVAAQRAADTIFQFYRDSARRRYSKS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggctgctgcctgcggccgttctcctgcgagcaggggctgctctcgcgg
cctgacggctccgccgccttcgtgcagggtgacacctcggtgctggccgggctgtacggc
cccgcggaggtgcggggctcaaaggagagccccgagagggcgacgctggaggtgctgctg
cgccccaaggtggggctgccaggcgtcggtgagcgcagccgggagcagctcctccggcag
acgtgcgaggccgtggtcctgggggctctgcacccccgcaccgccatcaccctcgtgctg
caggtgctcagcgacgccggctccctcctctcctgctgcctgaacgccgcctgcatgggg
ctgctggatgcggggctgcccctctcggccctcttctgcggtgtcacctgcgccctcgac
gcccagggcgccatcgtcctcgaccccacaacccggcaggagcaggaggctcgcgccgtc
ctcacctttgccatcgacagcacggaaaagaaagtgctgatggccaccaccagaggcagc
tgctccgtggaggagatgcagcagtgccttgtggccgcccagcgtgccgccgacaccatc
ttccagttctaccgggactctgcccgccggagatactccaaatcctga
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