KEGG   Aythya fuligula (tufted duck): 116501531
Entry
116501531         CDS       T07966                                 
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aful00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116501531 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aful03019]
    116501531 (EXOSC5)
Messenger RNA biogenesis [BR:aful03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116501531 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 116501531
NCBI-ProteinID: XP_032063017
UniProt: A0A6J3EMB3
LinkDB
Position
Unknown
AA seq 215 aa
MAAAGCCLRPFSCEQGLLSRPDGSAAFVQGDTSVLAGLYGPAEVRGSKESPERATLEVLL
RPKVGLPGVGERSREQLLRQTCEAVVLGALHPRTAITLVLQVLSDAGSLLSCCLNAACMG
LLDAGLPLSALFCGVTCALDAQGAIVLDPTTRQEQEARAVLTFAIDSTEKKVLMATTRGS
CSVEEMQQCLVAAQRAADTIFQFYRDSARRRYSKS
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcggcggccggctgctgcctgcggccgttctcctgcgagcaggggctgctctcgcgg
cctgacggctccgccgccttcgtgcagggtgacacctcggtgctggccgggctgtacggc
cccgcggaggtgcggggctcaaaggagagccccgagagggcgacgctggaggtgctgctg
cgccccaaggtggggctgccaggcgtcggtgagcgcagccgggagcagctcctccggcag
acgtgcgaggccgtggtcctgggggctctgcacccccgcaccgccatcaccctcgtgctg
caggtgctcagcgacgccggctccctcctctcctgctgcctgaacgccgcctgcatgggg
ctgctggatgcggggctgcccctctcggccctcttctgcggtgtcacctgcgccctcgac
gcccagggcgccatcgtcctcgaccccacaacccggcaggagcaggaggctcgcgccgtc
ctcacctttgccatcgacagcacggaaaagaaagtgctgatggccaccaccagaggcagc
tgctccgtggaggagatgcagcagtgccttgtggccgcccagcgtgccgccgacaccatc
ttccagttctaccgggactctgcccgccggagatactccaaatcctga

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