Aythya fuligula (tufted duck): 116501950
Help
Entry
116501950 CDS
T07966
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aful03000
]
116501950 (SOX1)
Transcription factors [BR:
aful03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116501950 (SOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116501950
NCBI-ProteinID:
XP_032063501
UniProt:
A0A6J3EIG9
LinkDB
All DBs
Position
1:146635493..146636617
Genome browser
AA seq
374 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPGSLSGQSGAGGGGGGGGGGGGGSKGGQDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLLKKDKYSLAGGLLGAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTAGGGY
AHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGGGGHPHHPHPHHPHHPHNPQPMH
RYDMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGAL
GSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQS
ASTGVNGTVPLTHI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcattcccccggcggagcccaggcccccggc
agcctctcggggcagagcggagcgggaggaggcggcggcggcggcggcggcggcggcggg
ggcagcaaaggcggccaggaccgggtgaagcgccccatgaacgccttcatggtgtggtcg
cggggccagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatcagc
aagcgcctgggcgccgagtggaaggtgatgtcggaggccgagaagcggcccttcatcgac
gaggcgaagcggctgcgggcgctgcacatgaaggagcacccggattataaataccggccc
cggaggaagaccaagacgctgctcaagaaggacaagtactcgctggccggggggctgctg
ggcgccggctcggccgggggcggcccggcgggcgtcggcgtgggcatgggcgtcggcgtc
agccccggcggcgtcgggcagcgcctggagagccccggcggcacggccggcggcggctac
gcgcacatgaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcggcg
gcggcggcgatgatgcaggaggcgcagctcgcctacggccagcacccgggcggcgggggg
cacccgcaccacccgcacccgcaccacccgcaccacccgcacaacccgcagcccatgcac
cgctacgacatgggcgcgctgcagtacagccccatctccaactcgcagggctacatgagc
gcctcgccctcgggctacggcgccctgccctacggctcccagccccaccagaactcggcg
gcggcggcggcggcggcggcagcggcggcggccgcctcctcgggggcgctgggcgcgctg
ggctcgctggtgaagtcggagcccagcgtgagcccgcccgtcacctcgcactcgcgggcc
ccgtgccccggggacctgcgggagatgatcagtatgtacttaccggccggggaaggcggc
gatccggcggccgccgccgcccagagccggctccactccctgccccagcactaccagagc
gccagcacgggggtcaacggcaccgtccccttgacgcacatctga
DBGET
integrated database retrieval system
