Anopheles funestus (African malaria mosquito): 125760545
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Entry
125760545 CDS
T09273
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125760545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afun03021
]
125760545
03036 Chromosome and associated proteins [BR:
afun03036
]
125760545
Transcription machinery [BR:
afun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125760545
Chromosome and associated proteins [BR:
afun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125760545
PBAF complex
125760545
GBAF(ncBAF) complex
125760545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
125760545
NCBI-ProteinID:
XP_049276716
LinkDB
All DBs
Position
2:complement(43735241..43741644)
Genome browser
AA seq
1419 aa
AA seq
DB search
MEMVSLGPKKDGNPNAEFFTAPETLQGFETVRLWLQKHFKKFLAPDPPTKESLAHLIIQF
IQYQEAKLGKNSQDPPTTRLPIRCFMDFKPGGALCHILSTMYRYKAEQRWRKFDFTVNKN
PMRKDPIGQMVLDIETALIEAECMRLPIVYIRPEVDRATANKITDIVTNHQGEITVDEEE
ATHIIYPVIDPLPEDYARPTFRREKHVMIHWYYFPESYDTWVPNSFDLPDNVPESPPSPA
ERWRVSASWVIDLDEYNEWMSEEDYEVDEMGRKKVHPHRLGVEDLMSSVAGGGAGSEDKV
KKTPKVVNSKRKRSPSPAAGKGGKRKSYRSPAASAAASSFQKKPRADDEESEDLTKDMDD
PTPETNITEVKPNMGSSTSGPATPQPKRDPDMMPMKYATVTDLDDEMERGGVGAGGAGGS
GSGMGGGSGGSGAGVGGDDSQAGKTSDSSNTQDFPVGGKDDLEDNVTEQTHHIIVPSYSA
WFDYNSIHVVEKRALPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLA
GDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKTAQ
PSAAKNLLDLDKKNATLGEKKDELAPGAMATGGANGAGGIGAPGTLIGPDGIKVEQGAIP
TADPNGQFGLRLDQYAKKPAAMRNKTAASMTREWTEQETLLLLEGLEMYKDDWNKVCEHV
GSRTQDECILHFLRLPIEDPYLEDDNTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPR
IAASAAKAAMEEFAAIKDEVPASMMDAHLKNVEKSSFGGKFDPNAGLANSGIAGTGPDKD
KEDESENKSATAAAGSTATPTAGAGTPATPATPSTDVEMKDVSKKDDADKEKATEETATK
SPDSDATATTADASKQPGATTDAAPGTAASVPDAKDKEGKDGAALTPSATGNQSETSTVA
KENGSTDPKLFNEGNLQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIK
LRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQLEQGQWQ
QQQAQAQAQAQAQAQAQAQQQQQQHGGPAGTVGVSGQIASSATPSSHGSQQSTGSASGTT
TTLPPGQHHLSAATMATNPGTNTAKPPSIVGGPGMVPGAPGAIHSPNQAIPGQVSGPTAA
AAAAAAATASSALPATASLPSVSQGPAATSAVPPSNGIIPPITSTQPPSTNPTDGITANS
IMPPGLGAPGASVPPPSPAAGGPHSDHSAVAASGPTAPGPAGVPMVPPPSGPGGPQQPSP
SEQQHAPLLAATPPTAGSSSDPSLPPPTAGEGMPPAAVPNPSPSSESLGEPGQVTAQPPE
TTTISASTVVASDPEQQSAGGAPSEGPVGVPPATGTPPS
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgtctttggggccgaaaaaggatggaaatcctaatgccgagttctttacc
gcaccggaaacgttgcaaggtttcgaaacggtgcggctgtggttgcagaaacacttcaaa
aagtttctcgcccctgatcctccgacgaaagaatcgttggcacatttgatcatacaattc
atacagtatcaggaagcaaaacttggcaaaaactcccaagatccacctacaacccgatta
ccgatacgatgcttcatggatttcaaaccgggcggtgccctgtgccacattctgtcaaca
atgtaccgctacaaggcggaacagcgctggcgaaagtttgacttcaccgtcaacaagaac
ccgatgcgcaaggatccgatcggacagatggtgcttgacattgagacggcactgatcgag
gcggaatgtatgcgacttccgatcgtatacattcgcccggaggttgatcgtgcgacggcc
aacaagataaccgacattgtcacaaaccatcagggagagataacggtggatgaggaggaa
gcaacccacataatctacccggttattgatccgctgccggaggattatgcacggccgacg
ttccggcgtgagaaacacgtcatgatccattggtactacttcccggagtcgtacgatacc
tgggtaccgaattcgttcgatctgcccgataacgtaccggaaagtccaccgtccccggcc
gaacgttggcgtgtgtctgcctcctgggtgattgatctggacgagtataacgagtggatg
tcggaggaagattacgaggtggatgagatgggccggaaaaaggtgcatccgcaccggctt
ggtgtggaagatttgatgtcgagtgtggccggtggtggtgctggatcggaagataaagtg
aagaaaacgcccaaagtggtcaactcgaagcgtaaacgatcgccttccccggccgcgggt
aaaggtggcaagcgaaagagttatcggtcaccggccgcatcggcggcagcgtcttccttc
cagaagaaaccccgagctgacgacgaggagtcggaagatctgaccaaggacatggacgat
ccgacgcccgaaacgaacatcaccgaggtgaaaccgaacatgggcagctcgacatcggga
ccggccacaccgcaaccgaaacgcgatcccgacatgatgccgatgaagtacgccaccgtg
acggatctggacgatgagatggagcgcggtggagtcggtgcgggtggcgcaggtggaagt
ggttccggcatgggtggtggtagcggtggatccggggccggtgtcggtggtgatgacagt
caggcgggcaagacgagcgatagtagcaacacgcaggatttcccggtcggtggtaaagac
gatctggaggacaacgtaacggaacaaacgcaccacataatcgtgccatcgtattcggcc
tggttcgattacaactcgatacacgtggtagagaagcgcgcgctgccggagttcttcaac
ggcaagaacaaatccaaaacgccggaaatttacatggcctaccggaacttcatgatcgac
acgtaccggttgaatccgaccgagtatctcaccagcacggcatgccgacgcaacttggcc
ggtgacgtgtgtgcgatcatgcgcgtacatgcgttcctagagcagtggggtctgatcaac
taccagattgatgccgattcccgcccaaccccaatgggaccgccgcccacatcgcacttc
cacgtgctgagcgacacaccttccgggcttcaaccgatcaatccgcccaagacggcacaa
ccatccgcggcgaagaatttgctcgatctggacaaaaagaatgcgaccctgggcgagaag
aaggatgagcttgcgccgggtgcaatggcgacgggtggtgcaaatggtgctggtggtatt
ggtgcacccggcacactgatcggtcccgacggtatcaaggtagagcagggtgctatcccg
acggccgacccgaacggacagtttggtttgcggttggatcagtacgcgaagaaaccagct
gccatgcgcaacaagacggcggccagtatgacgcgcgaatggactgaacaggaaacgttg
ctgctgctcgaagggctcgaaatgtacaaggatgactggaacaaggtgtgcgagcatgtc
ggttcgcgaacgcaggacgaatgcatactacactttctgcgtctgcccatcgaggaccca
tatctggaggatgacaatacgttcctggggccactatcatatcaaccgataccgttcagc
aaggcgggcaatccgatcatgtcgaccgttgcgtttctcgcttccgtggttgatccgcgc
attgcggccagtgctgccaaggcggcaatggaagaatttgccgctataaaggatgaagta
ccagcttccatgatggacgcacatttgaagaatgtagaaaaatctagcttcggtggtaaa
tttgatccaaacgctgggttggcaaacagtggtattgccggcacaggtccggacaaggat
aaggaagatgaatcggagaacaaatcagcaacagcggccgctggtagtacggcgacacct
accgctggtgctggtacacctgccaccccggccacaccaagcacggacgtggaaatgaag
gatgtgtcgaaaaaggatgatgccgataaagaaaaagcaaccgaagagacagccacgaaa
tcgcctgattccgatgccacagcaacgacggctgacgctagcaaacaacctggcgccaca
acggatgctgcacctggtacggctgcttccgtaccggatgcgaaggacaaggaaggtaaa
gacggtgcggcactaacgcctagcgcaactggcaatcaatccgaaacgtcaaccgttgct
aaagagaacggttcgaccgatccgaagctgttcaacgaaggcaatctgcaagcggcagct
gctgctgcattggccgcggctgccgttaaggcaaaacatctggccgcagtcgaggagcgc
aaaatcaagagcctggttgcgctgcttgtcgagacgcagatgaagaagctggaaattaag
ttgcgccacttcgaggagttggaaacgacgatggaacgcgaacgcgaaggactcgagtat
cagcggcagcagttgatacaggagcgccaacagttccatttggagcagctaaaagcggcc
gagttccgggcccgccagcaagctcaccagcgtttccagctagagcaaggccaatggcaa
cagcagcaggcacaagcgcaagcgcaggcacaagcacaagcgcaagctcaggcacaacag
cagcaacagcagcatggtggacccgcaggaacggtcggtgtttcgggtcaaatcgcttcg
tcggccacaccatcatcccatggttcgcaacaaagcaccggttcggcatcgggcacgacg
actactttgccgccgggtcaacatcatctgagcgccgctacgatggccaccaatccggga
actaacactgcaaagccgccatctatcgttggtggcccggggatggtgccgggagcgcct
ggagcgatacattcccccaaccaagcaattccgggtcaagtgtccggaccaacagcagca
gcagcggcagcggcagcagcaacagcatcatcggcactgccagcgacagcatccttacca
tcggtcagccaaggaccggcagcaacgtccgcagtgcccccctccaacggtatcatcccc
cctattacctccacccagccgccctctacgaatcctaccgacggtattacagcaaatagt
ataatgccaccgggtctgggtgctccgggagcatcagtgccacccccctcaccggccgcc
gggggtccgcacagcgaccactcggcagtagcggcgtcgggcccgaccgcacccgggccc
gccggtgtcccgatggtgccgcccccgtctggccctggcggaccccagcagccatcgccg
tcggaacagcagcatgcaccgctgctagcggcaacacccccaacagcgggttcgtcgtcc
gatccctccctaccaccaccaaccgcgggagagggaatgccaccggcggcagtaccgaac
ccgtccccatcctccgaatccctcggagagccgggccaggttaccgcacagccaccggaa
acgacaacgatcagcgcgagcaccgtcgtagcgagtgatccggagcaacagtccgccgga
ggagcgcccagtgaaggaccggttggtgtaccaccagcgaccggcacgccaccatcataa
DBGET
integrated database retrieval system
