Anopheles funestus (African malaria mosquito): 125761469
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Entry
125761469 CDS
T09273
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03440
Homologous recombination
afun03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125761469
03450 Non-homologous end-joining
125761469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afun03032
]
125761469
03400 DNA repair and recombination proteins [BR:
afun03400
]
125761469
DNA replication proteins [BR:
afun03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
125761469
DNA repair and recombination proteins [BR:
afun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
125761469
BRCA1-C complex
125761469
NHEJ (non-homologous end-joining)
MRX complex
125761469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_15
DUF724
AAA_21
AAA_29
DUF3450
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
125761469
NCBI-ProteinID:
XP_049278569
LinkDB
All DBs
Position
2:29110218..29114536
Genome browser
AA seq
1308 aa
AA seq
DB search
MSTIKKLEIRGVRSFGVERDDVQQINFRSPLTLIVGQNGCGKTTIIECLKYGLTGELPPG
TNRGIGFVHDPKIFNTVESLGQVKLMVKDFTGNTVTAIRSMKITRKNKTPKFETLDSTIT
MENAQTKEKITMTRSRVTDINNEMCDAMGVSKAILNNVIFCHQEESCWPLDEPKELKKKF
DAIFGTTEYNRVIDKLIKISKGYNEELKEKMADLKLLENVKSQAETKQLQLEDGDKKLGK
LHQTISELEIDIKPIQDKLEQLAIVERQYSSLLTKKIEFSSKIKSKKEQSQQLQAKINKL
FDGSLHELEVEIKIFQQTSASKHSELEEDESELQRFKSQDRSLQSKLQSIDGQRIEFSEK
QKRERELQIERGKKMKTLGGKLTLALSDNLGDASISASVLESGLSSIRNALKQQELNLQS
KTKTFEEDDVRAQKSIDKLRETKATLESDSTSKRKQIAQLEREKLQAMREVAEIESSAES
LKRLIDEINRLEQEYETQVAATNLPAMRKELGERKQLRDQLQGELDRLEERISSLDKVAM
KEQELTLKEQQCTSRENELRRLRNKHADSLRRLFPDRTIESNYKTNLQSLYDDLQKEVKT
VNEKIRRAQAIVTEMETTRKNQKTQLERLERDLGEAEEKIYSACRGNAYEDVLAKLNDKI
AKNNMEHGEARSAVVLYQKFISNIENDRCCPVCDKGLESEDVHDVSSKLSDEIRRLPEKI
EALERTLKKDRSDYDKLLALKPISERLEKQKKELPQLKQQLQDTEKRLTTASDDLEEHQL
AVSEPTANMQLINTIVGDMSILDKLGLELERMKRGVEELRSQLGTHITEGVTIESLKSER
DTLRTNFKTERNVVDEMQNTIDTKAEKLNNMQSRNNQMKSKKLKLQEAVQSLDQKRANVS
EMGAKMTTLNAELKTAEQQLNPVKVQLQTELEQKQRAKEQNNRELQVLRKTLDALRWEET
EIVRLGSELDELAALNLSAELSRLQSKKEQVQQEQDQLKRSMECKAKGIEKLKQDIANQH
MQERDLIDNKDLKRLIRETTDLEAELAVLLKNMGDMEVGNVQKERNRLIDLRDALQAKRS
ELNGQASELKRQLNELRKELEHSEYRNATRNYFKTLGESMVQRKIISDIKKYRDALEGAL
QEYHTEKMQEINRTIFSLWRDIYRGNDIDYIRINTVDDGVAERSDRRRIYTYGVVQAKHD
VEIDMRGRCSAGQKVLASLIIRLALAETFSSNCGVMALDEPTTNLDRENIESLCESLRRI
VSERQGGNFLLIVITHDEEFVTKLEQFETYYRISRNGDGKSMIKEESL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgataaagaagcttgaaatacgaggtgtacgtagttttggcgttgagcgtgac
gatgtacagcaaataaatttccggtcgccgcttacgttgatcgtggggcagaatggatgt
ggtaaaaccaccatcatagaatgtctgaaatatggtcttactggagaacttccaccaggt
acgaaccgtggaattggtttcgtacacgatcccaaaatattcaacaccgtagaaagcctg
ggacaggtgaagctgatggtgaaggatttcacgggaaacacggtgacggcaatacgttcg
atgaaaattacgcgcaaaaacaagactccaaagttcgagacgttggattccaccatcacc
atggagaatgcacagacgaaggaaaaaatcactatgacacgttcgcgagttacagacatc
aacaacgaaatgtgcgacgcaatgggtgtttcgaaagccattctaaacaacgtaatattt
tgccaccaggaagaatcctgctggccactggatgaacctaaagagctgaagaaaaagttc
gatgccattttcggaaccaccgagtacaaccgggtcatcgacaagcttatcaaaatcagc
aaagggtacaatgaagagctgaaggaaaagatggcagatttgaaactgctggagaacgta
aagtcgcaagctgaaacaaaacagctgcagctagaagatggtgataaaaagctaggaaag
ttacatcaaactattagcgagctagaaatcgacattaagccgatccaggataagctcgag
cagttagcaatagttgagcgtcagtattcttcactgttaacaaaaaagatagaattcagc
tccaagataaagagcaaaaaagagcagagccaacagttgcaggcaaaaataaacaaactt
tttgatggttctttgcatgagttggaagtagaaattaaaatattccagcaaacttctgcc
tcaaagcattccgagttggaggaggatgaatcggaactgcagcggttcaagtcgcaggat
cgttccctgcaaagcaagctgcagtcaatagatgggcaaaggattgagttttccgaaaag
cagaaacgagaacgcgaacttcagattgagcggggcaaaaagatgaagacccttggcggt
aagcttactctcgctttgtccgataatttgggcgatgcttcgattagtgctagcgtttta
gaatcgggtcttagctcgatccgtaatgctttgaaacaacaagagcttaatttacaatcg
aaaaccaaaacgttcgaggaggatgatgtacgggctcaaaaaagtatcgataagttgagg
gaaaccaaagccacactggagagcgattccacttccaagcgcaaacaaattgctcagcta
gaacgagaaaagctgcaagctatgcgtgaggtggctgaaattgaaagttctgccgaatcg
ctgaaacgattgatcgacgaaatcaaccggctcgaacaagagtacgaaacgcaggtggcg
gcaaccaatttaccagcaatgagaaaagagcttggcgaacggaagcaattgcgcgatcag
ctgcaaggtgagctagatcgtttggaagagcggatcagttcgttggataaggtagcgatg
aaggaacaggagctaacactgaaggaacagcaatgtaccagccgtgaaaatgagttacgc
cgactgcgcaacaagcatgcagatagcttacgccgtctatttcccgatcgtacaattgag
tcaaactataagaccaacctgcaaagcctatacgatgatttgcaaaaggaggtaaaaact
gtaaatgagaaaatacgtcgagcacaagcgattgtgaccgaaatggaaactacgcgaaag
aaccaaaagactcagctggaacggttggagcgtgatttgggagaagcggaagaaaaaatt
tacagtgcctgtcggggcaatgcttacgaggacgtgttggctaagctgaacgataaaatt
gccaaaaacaatatggagcatggagaagcacgatcggccgtagttttgtatcaaaagttt
atttctaacatcgaaaatgatcgctgctgtccggtgtgcgacaaggggttggaaagtgag
gacgttcacgatgttagtagcaagctttccgatgaaatccgacgactgccagagaagatt
gaagcactggaacgtacgctcaagaaagatcgttccgattatgataagctgttagcattg
aagcccatttccgagcggttggaaaagcaaaagaaggaactgccccagttgaaacagcag
ttgcaggatacagaaaagcggctcactactgcatcggacgatctggaggaacatcagctg
gctgtgtcggaaccgaccgccaacatgcagttaattaatacgattgtcggtgatatgagc
atcctggataagcttggtctcgaattggaacgcatgaagcgcggtgttgaggagctacga
tcccaactgggaactcacattactgaaggagtaacaattgaatcactcaaatcggaacgc
gatacattgcgcaccaattttaaaacggagcgaaacgttgtggatgagatgcaaaacaca
atcgatacgaaggcagaaaagctcaataacatgcaatcccgcaacaatcagatgaagtcg
aagaagctgaagttgcaagaagcggttcaatcgttggatcagaagcgcgcaaacgttagt
gagatgggtgcaaaaatgactacactaaacgctgagctcaaaactgccgaacaacagctg
aaccccgtgaaggtgcaactgcaaacggagctagagcaaaagcagcgcgcaaaggagcaa
aacaaccgggagctacaagtgttgcgcaaaacattagatgcgctgcgttgggaggagacg
gaaatcgttcggttgggtagcgaattggatgaacttgcggcacttaacttgagtgcagag
ctgagccggctccagtcgaaaaaagaacaggtacagcaggaacaagaccagctgaaacgg
agcatggagtgtaaggcaaaaggcatcgaaaaacttaaacaggacattgccaatcaacat
atgcaagagcgtgatctgatagataacaaggatctaaagcgtttgatacgtgaaacgacc
gatctagaagcggagctcgcagtgttgcttaagaacatgggcgacatggaagtgggaaac
gtacagaaagaacgcaaccggcttattgacctgcgtgatgccttacaggcgaagcgcagt
gaactgaatggtcaggcgagtgaactgaagcgtcagctaaacgagctccgaaaggagttg
gagcacagcgaatatcgcaatgctactcgaaactatttcaaaactttgggcgaatcgatg
gtgcagcgaaaaatcatcagcgacattaaaaagtaccgggatgcactcgaaggtgcgttg
caggagtatcacaccgaaaagatgcaggagattaatcgtacgattttttcactgtggcgt
gatatctatcgtggaaacgatatcgattacatacgcatcaatacggtggacgatggtgtc
gcggaacggtcggaccgacggcgtatatacacgtacggtgtggtgcaggcaaagcatgat
gtagagatcgatatgcgcggtcgctgtagtgctggacagaaggtgttggcctcgcttatc
atacgcttggcgctggcggaaacgttcagtagcaactgtggtgtgatggcactggatgaa
ccaactactaacttagaccgggaaaacatagagtcgttgtgtgaatctttgcgtcggatt
gtttccgaacgacaaggaggtaactttctgctgatcgtcatcacgcacgacgaggagttt
gtgacaaagttggagcagttcgaaacgtactatcgaatttcgcgtaatggcgatggcaaa
tcgatgattaaagaggagagtctctaa
DBGET
integrated database retrieval system
