Anopheles funestus (African malaria mosquito): 125762874
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Entry
125762874 CDS
T09273
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
afun
Anopheles funestus (African malaria mosquito)
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afun03400
]
125762874
DNA repair and recombination proteins [BR:
afun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125762874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
125762874
NCBI-ProteinID:
XP_049281407
LinkDB
All DBs
Position
2:88049063..88058429
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AA seq
2069 aa
AA seq
DB search
MAATPGDSSSIPPEKSIVLKGWEKLDDDVIIKEVATKGKHVNLCIQYLAERNELSMKEAK
NYFLQKVNAYVYRLLSNRQLYKAHHILKNIDRVPRYVFYQIAAETTDHGLRDYIREHLAR
TVENYSNGEEERIAASWRVYTQLKANVRQMAEVLNEVTTGYTVLEIETMSFNTFCMKEDV
YRNSVAVDLFFKNQETEISPILDRYTVWSYLLKNNIANLVKIWIQLNSCLRRCFHDGTDP
TPHLLRIKIDIYDDPRFNERLRQLFQRWEIDDFMLSQLSHHRALSRNDILLNELARLGKF
LDHERNDAVPILRRLFTTESFKQHREWTEAKWFRMQLTRQMVDNRFFTMLGLRIVCKELL
EQIASDPTAQYQEEVQLFLHLQKLKDSTITGQELLNVSRTTSAYILQHNRAFYEENPIVY
LFEYGLDETNTHFEEDNPYLMKLPHLHNFIARCKTGFGASESYGLVIRKLLAIAGIPDAA
KVKQFLFHGTRTDANGAVEEEDERASQLELLEQYGTIPHFNHPLLVSKYGQTVTLRYMHY
IRLHRACHAVYEFYREQLQNYSQISTRQLNSAAQTVAQLAIESYWDKALATHAVAFIEMI
GVSSVPTRAYLRCLSLVGGAAQDVQQQDGDRTPIRLTVANLLQRCEEAIGNKLLDDPELL
IDLEAMTIVAKTNGLPYPESYLKDRLLARNDWYRFLLLVDYLNYPQEQIVELCRTGFGES
RIGRNLMTALLHQPRPIESGRDGQTSSSSFTSIKRRSSLTPRRRRRASSTTADSSGHSSI
SSETDGASIGRSTSGIGHTSASSPPLQLQATDISTSSSCSLYDGAGFLSERYDTDLVSMV
LLCSNESNPYTAAPNQLPFDFDAFKRLTIQATSSRQSSQRYPYTYQNLLDRAIRYRWPLL
ALLAGDICPEGSECRRYCWIVWAMLAGEFPFRDKLSQEQTDREPSPERTFVCGLIEHLVR
TGRLCTLASSLAVFYPDSGWYHLAAYISLTEDVLFDGNQAAELLVSFLARSTAAGDECFL
LHIPKYEMFNFCARLLMIHLDRRSSMHHQFLLLQSYVRCDFHCFLVPGMDFERMLRICAI
VRHCDVRIDFLALHECSSGGKEQQLGVYESLCEQLVAKKHHEAAIAVAEEAGLPRESIIF
EHWVSGFESSGSVGSFDRYRVESERYGLGPELRISFFTHIANRLEYGDRQRYDLLRCALE
LIREHSLYPSETFDRDRLEYELALSYIRFTDERPELLELYCSQYWCNTQQQQNAPPTAAV
LYHTFLELKEVAGIDDLTLSNVPLTQTEERLRLDALINRLLDCGDIVQALRYQAIFEQRP
LDLHFIVFCMALAEGLVSLYNLSKEERMLLNEDSARSSGRFQRRTLRFSRVSQSSQIGGS
PMKSGPAQLDSSDTSTTGMSDFEEVPSRDRQDIFEAISALGNRITHGQDLAQRVVLTYRV
AMYLDREYNELLKLRDPLAFLPEVVREDCVHKLEVISDIVTATRMSIESFTDFLASEIVS
AVVRSKFYLFQRQQSQPNQASDELLWGYNIDREFHLFLELAPSTTALGNVLLRYCNAFRL
YRKRRDTTADSAGVQDALESFATLPALRLNVTGTDHVNRLDQILQGQILSLKKQNTIIVA
LLVKAHDCFVHECSMEGIMEVLACCKALTVILTAAKSWNLIVKLLVGIGRYRDMYYCFET
LIGHEQFESLLGQFDDRATNGRRLQSAIITYLNEHCPERRDYFRLAALHFRMYREIAELW
ETEAHGTIDAIVKTYEIKQPVVKAQFSTAAAYSHRLQVTALLQTELTSAMDAFTHATENY
LLDNNLTLAQRAAASAELIALQICYVRQALAASEKGQNESSPSSSTANKQASCTCLSVLN
IRPSNEDNRRGGAMQESTCTNTATGTLLYYINFVLSVPQALIVGRAYGIEINWPGAIYQH
YIIQGETAYLEDYLDRLPLTDGMIETLVKLFQLEPSLTPRMEQAIGTFIDRIQSVTLKYR
LSSLLGLKKTIHGLINGGAVYYLKDTNYGKNDVEPSGGGSGGSSGGGNSAASSIVGAAGA
APGVSMTSSLVGSASITSNTVSLHTMSSS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacacccggagatagttccagcataccgccggagaaaagcatcgtactgaag
ggctgggaaaagctggacgatgatgtcattatcaaggaggtggctaccaagggcaaacac
gtcaacctttgcatccagtatcttgccgaacggaacgaactgtcgatgaaggaggccaag
aactactttctccagaaggtgaatgcgtacgtctatcggttactgtcgaaccggcagctt
tacaaggcacaccacatcctgaagaacatcgatcgtgtcccgcggtacgtgttctatcag
atcgcagcggaaaccaccgatcacggattgcgggactacatacgggagcatttggcacga
acggtcgaaaactacagcaacggtgaggaggaacggatcgctgccagctggcgggtttac
acacagctaaaggcgaacgtgcgccaaatggctgaggtgctaaacgaggtgacgaccggt
tacacggtgctcgagatcgagacgatgtcgttcaacacgttctgcatgaaggaggacgtc
taccggaactcggtcgccgtggatttgttctttaaaaatcaagaaactgaaatttcgccc
atcctcgaccggtacaccgtttggagctatctgctaaagaacaacattgccaatctggtg
aagatatggattcaactaaacagttgcctgcgacgctgcttccacgacggtaccgatcca
acgccacatctgctacgcatcaaaatcgacatctacgatgatccgcgctttaacgagcgt
ttgcgccagctgtttcaacggtgggaaattgatgatttcatgctgtcgcaactgtcccat
caccgtgcgctttcgcgcaacgatatcctgctgaacgaattggcccggcttggaaaattc
ctcgaccacgaacgtaacgatgcggttccgatccttcgccggctgtttaccaccgaatcg
ttcaagcagcaccgcgaatggacggaagcgaaatggttccgtatgcagctcacacgccag
atggtggataatcggttctttaccatgcttgggttgcggatcgtttgcaaagagttgctg
gaacagatagcatcggatccgactgcacagtatcaggaggaggtgcaactatttttgcat
cttcaaaaactaaaagacagcacaattaccggccaggagctgttgaacgtatcgcgcacc
acttccgcttacatactgcagcataatcgtgccttttacgaggaaaaccccattgtgtat
ctgtttgagtatggtttagatgagacaaacacacactttgaagaggacaatccatatctg
atgaagctgccacatcttcacaactttattgcacgctgtaagactggctttggggcaagc
gaatcgtacggtctcgttataaggaagctgttggctatcgctggcatcccggatgcggcc
aaagtgaaacaatttctcttccacggtacacgcacggatgcgaatggtgctgttgaggaa
gaggatgaacgtgcgtcacagctggaactgctggagcagtacggtaccattccacacttt
aaccatccgctgctggtgagcaaatacggacaaacggtcacattgcgttacatgcactac
atccgactgcatcgggcttgccacgcggtgtacgagttctatcgcgaacagttgcaaaac
tattcgcaaatatccacccgtcagctaaacagtgcagcgcaaacggtagcacagctggcc
atcgaaagctactgggataaagcactcgccacccatgctgtcgcattcatcgaaatgatc
ggtgtaagcagtgtaccgacacgtgcctatttgcgctgtttgtctctcgttggcggtgca
gctcaggacgtgcagcagcaagacggcgaccgtacaccgatccgacttactgtcgccaac
ttgctgcaacggtgtgaggaagcgatcggtaacaaactactcgacgatcccgaactgctg
atcgatctcgaagcgatgacgatcgttgcgaaaacgaacggactaccctatcccgaatcg
tacctaaaggatagactgctggctaggaacgattggtatcggtttctgctgctggttgat
tatctcaactatccgcaggagcaaatagttgagctgtgccggacgggtttcggtgaatca
cgtatcggaaggaatcttatgacggcactgctgcatcagccaagaccgatcgaaagtggc
cgggatggacagacaagctcaagctcctttacctccatcaagagacgctcgagtttaaca
cctcgccgtagaagaagggcaagcagtacaactgccgactcaagtggtcattctagtatc
tcaagcgaaaccgatggtgcttccatcggtcgaagcacatccggtatcggtcacaccagt
gcttcatcgccaccgctacaactgcaagccaccgacatctccaccagctcatcttgttcc
ctgtacgatggtgccggattcctttccgaacggtacgacaccgacctagtatccatggtg
ctactctgctcgaacgaatccaacccttacacggcagcaccaaatcagttaccgttcgat
ttcgatgccttcaagcgcctcacgatacaggcaacttccagtcggcaatcatctcaacgc
tatccatacacttaccaaaatttgctcgatcgtgcaatacgttaccggtggccattgtta
gcactgcttgccggcgatatttgtccggaaggtagtgagtgtcgtcgctactgctggata
gtgtgggcaatgttagccggtgagttcccgttccgggacaagctgtcacaggagcaaacg
gatcgagaaccttcacccgaacggacatttgtatgcggtttgatagagcacctggtacgg
acgggtcgactctgtacgctcgctagctcactggccgttttctatcccgattctggctgg
taccatctggcggcatatatcagcctcaccgaggacgtgctgttcgatgggaatcaggcg
gccgaactgctcgttagctttctcgcccgttccaccgctgccggggacgaatgtttcctg
ctgcacataccgaagtatgaaatgtttaacttttgcgcccgtttgcttatgatacatctc
gatcgccggtcctcgatgcatcatcagtttttattgctccagtcgtacgtacgatgtgat
ttccattgctttctcgtgcctggtatggatttcgaacggatgctgcgcatatgcgcgatt
gttcgtcactgtgatgtaaggattgattttcttgcgctgcacgaatgttctagcggtggc
aaggagcaacagctaggcgtgtatgagtcgctgtgtgaacagctcgttgccaaaaagcac
cacgaggcagccattgccgtggcggaagaggcgggtcttccacgtgaaagtattatcttc
gagcattgggtgagtggcttcgaatcgagcggttccgttggatcgtttgatcgttaccgg
gtggaaagcgaacgttacggactggggccggaactgcgtatcagcttcttcacgcacatt
gccaatcggcttgagtacggtgaccggcagcggtacgatttgctgcgctgtgccctagag
ctgatccgagagcatagtctctatccgagcgaaacgtttgatcgcgatcggttggagtac
gagctggcactgagctacatacgcttcacggatgaacgtccggagttgctggaactttac
tgctcccagtactggtgcaatacacagcagcagcaaaatgcaccaccgacagcggcggta
ctgtatcacacatttctcgagctaaaagaggtcgctggcatagatgatcttacactgtcc
aatgttccgctaacgcaaactgaagagcgactgcggcttgatgcgcttattaatcggctg
ctcgactgtggtgacatcgtgcaagcgttgcgctatcaagcgatttttgagcagcgtcca
ctggatctacactttatcgtgttctgtatggccctggcggaagggcttgtcagcttgtac
aacctttcgaaggaggaacggatgctgctgaacgaggatagtgctcgatcgtcggggcga
tttcaacgccgaacgttgcggttcagtcgcgttagtcaaagcagccagataggtggctca
cccatgaagagtggcccagcacagctagattcatccgatacgagcactacaggaatgtcc
gattttgaggaagtaccatcccgtgatcgtcaagatatttttgaagctattagtgccctt
ggtaatcgcatcacgcacggacaggatcttgcacagcgcgttgtccttacgtaccgtgtg
gcgatgtacctcgatcgagagtacaatgagctgctaaagttgcgcgatccactcgccttc
ctgccggaggtggtacgggaagattgcgtccacaagctggaggtgatcagcgatatcgtt
accgcgacgcgcatgagcatcgaaagctttaccgattttcttgcctcggaaatcgtttcg
gcggtggtacgttccaagttttatctgttccaacgtcaacagtcgcagccaaaccaggcg
tccgatgagttactgtggggttacaatattgatcgggagtttcatctatttctcgagctc
gcaccaagcactacggcgctgggcaatgtgctgttgcgttactgcaacgcttttcggctg
tatcgcaaacggcgggatacgacagcggacagtgcgggtgtgcaagatgcgttggaatcg
ttcgcaacactgcccgctttacggttgaatgtgaccggtactgatcacgtgaatcgtttg
gatcaaatcctgcaaggacaaatactgtcgctgaagaagcaaaacaccatcattgtagcg
ttgctggtgaaggcgcatgattgctttgtgcacgagtgttcgatggaaggcattatggag
gtgttggcatgctgcaaagcacttaccgtcatactgacagcggcaaaatcatggaacctg
atcgtcaaattgcttgtcggcatcggacgctaccgcgatatgtattactgcttcgaaaca
ctgatcggacacgaacagttcgaatcactgctaggtcagtttgatgatcgtgccacgaat
ggccgtcggttgcagtccgccatcattacctacctgaacgaacactgtccggaacggcgt
gattacttccgtctggcagcgctccactttcgcatgtaccgagaaattgccgagctgtgg
gaaacggaagcgcacggtacgatcgatgcgattgtcaagacgtacgaaataaagcagcca
gttgtgaaagcgcaatttagcactgctgctgcatacagtcatcgtctgcaggtgacggca
ctgctccaaaccgaactaaccagcgctatggacgcatttacgcacgcgaccgaaaactat
ctgctagataataatctcacactcgcacaacgtgccgctgccagtgccgagctaatagcg
ttacaaatctgttacgtacgccaagcgttagctgcgtcggaaaaaggacaaaacgagtca
agtccttcgagcagtaccgctaacaaacaggcgtcatgtacctgtctttctgtgttgaat
attcgcccatcgaacgaggacaatcggcgcggtggtgctatgcaggaaagcacatgcacc
aacactgccaccggtacgttgctttactacatcaactttgtgctcagtgttccgcaagcc
ctgatcgtgggccgtgcgtacggtatcgaaatcaattggcccggtgcgatctatcagcac
tacatcatccagggcgaaacggcgtacctggaggactatctcgatcggctcccactaacg
gacgggatgattgaaacgttagtgaaattgttccagctggaaccatcgcttacgccgcgg
atggagcaagcgattggcacctttatcgatcgcatacaatcggtaacgctcaagtatcgc
ttatcgtcactgctcgggctgaagaaaactatacacggtttgataaacggtggcgctgtc
tactatctgaaggacacaaactacggcaagaatgatgtggagccgagtggtggcggtagc
ggaggtagtagcggtggaggaaacagtgcagcatcgagcatagtgggtgctgcaggagct
gcgccaggtgttagcatgacgagcagcttggtaggaagtgccagcattacaagcaatact
gtgtccctgcacacaatgtctagttcgtga
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integrated database retrieval system
