Anopheles funestus (African malaria mosquito): 125762878
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Entry
125762878 CDS
T09273
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125762878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afun03019
]
125762878
03012 Translation factors [BR:
afun03012
]
125762878
Enzymes [BR:
afun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125762878
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125762878
Translation factors [BR:
afun03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125762878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_C
HA2_N
AAA_19
ATPase
nSTAND3
AAA_22
AAA_11
DUF7428
Rad17
AAA_16
Motif
Other DBs
NCBI-GeneID:
125762878
NCBI-ProteinID:
XP_049281416
LinkDB
All DBs
Position
2:88083307..88087661
Genome browser
AA seq
1057 aa
AA seq
DB search
MSDEEDSLEEKLRKFRLWKEASSEGSAAFNINESAETSRSNNYNQDKSNQSMNRGSQEKP
PSHLKGRELGMYYRNKARRTKQQSSQDPDSNDGHWRNERHKGLQRRKAQERSSYEANEPG
SSNRFRRFQDQRDINLEEQAEAPPAGLRGRELGLFYRDRQTAKTKQREKRNAVDITLPRW
QIQEIRTNLQINQGFEQSDIYREFIENENIRSVFKNEYLRVISKTLTETLREERAKMDQN
LSSGEACGSFVTDDRLHDEKCRMDSATMLDKFRRSLPAYQQRNTILDMVEQHQVILIKGG
TGCGKTTQVPQYILEQASSRGRAASCRILCTQPRRISAIMLARRVADERKENLGHSVGYQ
IRLEAVRPSTAGGSILFCTTGIVLTLMQSDPLLREYSHLVLDEIHERDVTTDVLLAIIRM
VCSCRKDLRVILMSATLTADTFSRYFNNCPMVEIHGITYPVREHFLEDVLRDLKYYSFDD
KMASGRMRNQSQQQQQESFNAIMKPYCEEIRHRYPAPVLRALQNPGSENNQNELIVELLY
YITCSQPPGAILVFLPSLAQISDINKMIRKHRMLSQERLLVYPLHSHLPTRDQTMVFGRP
PDCVRKIILATNIAETSITIDDIVYVVNAGRHKLNRYENGISVLRDEWISISNEIQRTGR
AGRVQEGVCYHLYSRGRRCTFLDNVPPEITRVALDEVILQTKILQLGNTRAFMEHLLDKP
TDDVIEESLQLLNRLNAIDNEEKLTPLGYHLARLPMDPRTGKMVLLASIFSCIDPITSIA
ASLTFKNAFCKPFGREKEVDRIKRNFAQDSASDHIMLANVIAEWRRQSNKDGFCGKNFLN
GATLQQLSNMKGQFCEYLHAAKFVAASHADSRPNNLHSDNIELLRAIVGAGLYPNVAFIR
RVIRSRNSPDGRAILNIENQGRAEIHPGSVNGNRGIFHSNFVVYYDMMKLSSLTIFDTTI
VNPFPLLFFGDNHVETIDGREMISIAGHYCLKCDKETYDLIQDLRAGFNLFLQKHICNPS
PVDWTSREGELLRSIIKLITMDGKYEDGFDDDDDAEG
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaagaggactcactagaagagaaactgcgtaaatttcgtttgtggaaggaa
gcttcatcggagggcagcgctgctttcaacataaacgaatcggctgaaactagccgctct
aacaactataaccaggataaatcaaaccaaagcatgaacagaggatctcaagaaaaacct
ccttcccacctgaagggacgtgagctgggaatgtactaccggaataaggcacggcgaacc
aagcagcaaagctcacaagatccggacagtaacgatggtcattggcgcaacgaacgtcac
aaaggtttgcagcgtcgcaaagctcaggagcggtccagttacgaagcgaacgaaccaggc
agctcgaatcgattccgccgctttcaggaccaacgcgacatcaatctagaggagcaagcg
gaagcaccaccggctggtttgcgtggccgagaacttggccttttttatcgcgatcggcaa
acggccaaaacgaagcagcgcgaaaaacgcaatgcggtggatattaccctgcctcgctgg
caaatacaggagattcgaaccaatttgcagataaaccaaggtttcgaacagagcgacatt
tatcgggagtttatcgagaatgaaaacatccggtcagtgtttaagaatgagtatctgcgt
gtgatcagcaaaacgctgaccgaaacactgcgtgaagaaagggccaaaatggatcaaaat
ttatcttccggggaagcgtgtgggtcgttcgtgacggatgatcgtttgcacgatgagaaa
tgccgaatggattcagcgacaatgctagataaatttcgacgatctttaccagcgtatcag
caacgcaataccatcctcgacatggttgaacaacatcaggtgattttgataaaaggtggt
acgggctgtggaaaaaccacccaggtaccgcagtacattctagagcaagcttcatcccgt
ggtcgtgctgccagttgtcggatactttgcacacagccccgccggatatctgccataatg
cttgcacgtcgagtggcggacgaacggaaggaaaatctaggccactccgttggctaccaa
atacggttggaagcggtacgacccagcactgctggtggtagcatcctattttgcactacg
ggcattgtgttaactttaatgcaatcggacccattgcttcgcgagtactcacaccttgtg
ctggacgagatacatgagcgagacgtcacgacggatgtactgctggccatcattcgtatg
gtgtgttcgtgccggaaagatttgcgtgtgattctcatgagtgctacactgacagctgac
acgttttcgcgctacttcaacaactgtccgatggtggaaatccatggcattacctacccg
gttcgtgagcactttcttgaggatgtattgcgagatttaaagtattactcttttgacgac
aaaatggcatcgggacgtatgcggaaccagtcccaacagcagcagcaggaatcttttaat
gcgataatgaaaccatactgcgaagagatccgccatcgctatccggcgcctgtccttcgt
gcgcttcaaaatccgggaagcgaaaacaaccagaatgagctgatagtggagctactgtac
tacatcacctgttcgcaaccgccaggagcgattttagtctttctgcccagtttggcacaa
atttcagacatcaacaaaatgattcgcaaacatcgtatgctttcgcaggaacggttgctg
gtgtatcccttacactcgcatctacccacgcgggatcaaacgatggtttttggccgtccg
ccggattgcgttcgtaaaattattctcgcgactaacatcgcggaaacgtccatcacgatc
gacgacatcgtgtacgtggtgaatgcgggtcgtcacaagctaaaccggtacgaaaatggt
atatcagtgttgcgtgacgaatggatctcgatttcgaacgaaattcaacgcacgggacgt
gccggacgtgtgcaggaaggtgtctgctaccatctgtacagtcgtggccgtaggtgcaca
tttctggacaacgttccaccggaaataacacgcgtcgcgctggatgaagttatactgcaa
accaaaattctgcagctcggtaatacgcgcgcattcatggaacatctgcttgacaaaccg
accgatgacgtgatcgaggaatcgcttcagctactaaaccggctcaatgcgatcgacaac
gaagagaagctaacaccgctcggttaccatctggcacggttaccgatggatccacgcacc
gggaaaatggtcctgctagcaagcatcttcagctgcatcgatccaatcacgtcgattgcg
gctagtcttacgtttaagaacgcgttctgtaaaccgttcggcagggaaaaggaagtcgat
cgtataaagcgcaactttgcgcaagattctgccagcgatcacatcatgctggcgaacgta
attgccgagtggcgccggcagtcaaataaagacggattttgtggcaaaaatttcctaaac
ggagcgacactgcagcagctttccaacatgaagggtcagttttgcgaatatttgcacgcg
gccaagtttgtcgctgcatcgcacgcggactccaggccgaacaatctgcattcggataat
atagagctgctgcgagcgatcgtcggtgccggcctgtacccgaatgtagcattcatccgt
agggtgatccgatcgcgcaacagcccggatggtagggcgatccttaacatcgagaaccaa
gggcgggcggaaattcatccaggatcggttaatggcaacagaggaatctttcattcgaat
tttgtcgtttactacgacatgatgaagctttcttcgctaaccatcttcgacacgaccatt
gtgaacccattcccattgctattcttcggagataatcatgtggaaacgatagacggtcgc
gaaatgatctcaattgccggacattactgcttaaagtgtgataaagaaacatacgacctg
atacaggatctacgtgcggggtttaatttgttcctgcagaaacatatctgcaacccttca
ccggtcgattggacctctcgagaaggcgagctgttaagatccatcattaagcttatcaca
atggatgggaagtacgaggatgggttcgacgatgacgatgatgcggaaggatag
DBGET
integrated database retrieval system
