Anopheles funestus (African malaria mosquito): 125763895
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Entry
125763895 CDS
T09273
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun04382
Cornified envelope formation
afun04512
ECM-receptor interaction
afun04518
Integrin signaling
afun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125763895
04518 Integrin signaling
125763895
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125763895
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125763895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afun04147
]
125763895
00536 Glycosaminoglycan binding proteins [BR:
afun00536
]
125763895
Exosome [BR:
afun04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125763895
Glycosaminoglycan binding proteins [BR:
afun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125763895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
125763895
NCBI-ProteinID:
XP_049283533
LinkDB
All DBs
Position
2:complement(76340368..76376689)
Genome browser
AA seq
1816 aa
AA seq
DB search
MLRAADPTLPGGLETKDTVHRRRRCSVRSVTFCVTLFLTCMLQLVQPSTAVVCNQTVCDC
KGLRGAPGQIGPHGVPGQSGDPGDIGFDGPQGPRGEPGNRGEIGTSGPKGYRGDTGERGP
LGVPGYAGLPGEPGFRGPYGIDGCNGTDGAMGSPGYPGIPGERGPQGPPGMIGYRGDSGE
GGINSKGTKGDIGVAGIPGVVGQRGWPGGRGPDGVDGVTGMPGDDGLPGLRGERGEQSED
FCPGEPGDPGEPYHYWGGKNETVSIGMKGPKGDRGYDGMPGLHGMKGDSGMQGERGQKGF
KGEEGKFGDRGKQGKEGPPGAAGEKGEKGAPGYAGLDGTAGDKGPSGDDGRPGLPGVQGP
PGPKGEYRPELAPIVIGPQGPQGDIGPPGRPGNVGIPGNKGLRGPMGPPGQPGDPGLNGR
AGPKGISPPGQRGDDGEGGQPGPIGTRGTPGQAGSKGQVGFPGRSLLGAKGEPGTNGLNG
DFGEKGDQGDDGESGDKGLPGIGVNITGPPGPAGLPGRDGPPGDLGFNGYTGQKGDKGFR
GEDCGTCPPGPKGVKGEDGDIGRPGLDGYDGNRGLTGPRGYQGIAGKQGLKGVMGRKGER
GDFGERGVPGEPGRPGVIRRAKDFVDLTPELGERGDRGQRGDQGLPGDLGDFGAVGYPGR
PGEPGEYGDDGESGRPGNDGLPGIDGRNGAPGRDAYVNEYNVWSIRGTPGIPGDKGAKGE
SGDQGDRGEPGAMSEMIYDIEGPKGEKGVMGDLGPKGEKGYKGEVGLHGLRGLDGPAGLP
GLSIQGPEGYKGYYGVIGDHGPAGIPGEDGLPGPDGIPGLQGLRGQRGDPGRPILMGEKG
VEGEGGFFGEIGDKGFKGPEGNRGTMGESGTKGERGEPGPFGKSGLRGNKGQMGDIIYGD
RGLPGLPGRNGLQAPFGDKGERGEPGMEGFPGPKGERGEIGRDGLPGLPGDDGLSGERGL
QGRMGDMGEEGYQGERGFTGDQGHPGLTGTRGLQGLRGLKGFSGDPGDMGFPGRNGAPGR
KGERGDFGDMGPRGRKGGASFSGMKGEMGEAGMMGPPGYNARPGMMGRKGEEGDAGQVID
GYQGVKGQKGAPGFPGIPGRPGAKGERGDVGVFGPKGISGDKGRDGYPGIAGRPGRPGPR
GPLGPRGEQGSRGETGEPGEDGLTGFVGEKGMRGDVGMIGPSGLPGIDGDPGLPGIPGNV
MMRSAQQGDQGDPAPEGLEGDQGPPGLKGQRGYTGRKGEQGLPGFVGMVGIEGHDGPKGQ
RGDPGMKGLPGELQTRTERGDQGEAGYDGLTGRPGIPGNKGAPGDYGDNGLMGLQGLPGF
VNGALKGKKGEIGFEGAPGQDGLPGLPGLDGVMGSPGPRGLAGSIGPIMPGFRGDIGDDG
LPGLEGMPGPPGFPGDRGLQGFPGLNGLPGPKGQQGEEGVEGYHGLVGLKGMKGEVGDLP
PLSNWRPTQPGDRGTPGARGEPGDEGDMGPSGYPGMRGPKGMQGLQGEQGIAGEVGFKGE
RGIAGPPGRNGIEGLPGLPGLPGEQAAPPPPPKNLGYIFARHSQKVTIPECPINTYKLWD
GYSLVNVIASSRSSGQDLGTAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPM
PMSMAPIPADQVERYISRCTVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTSD
NSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYDGISSFWLTIIDDAMQFNRPQQMT
LKAHQTSKVSRCIVCRRKAGIMRALHGGSSITASALRRPQTATVSRPQYPLPPSQPVSPR
RRVSAGRQRNRNRNQG
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggccgcggaccccacgctcccggggggtctggaaactaaggacaccgtccac
cggaggcgccgatgttccgtacgctcggtgacattttgcgtgacacttttcctcacttgt
atgctccagcttgtacaaccatcaacggcagtggtctgtaaccagacggtatgtgactgc
aaaggattgaggggtgctccggggcagattggaccacacggtgtacctggccagagcggt
gatccaggagatattggcttcgacggtccacagggaccgcgcggtgaaccaggaaatcgc
ggcgagattggtacgagcggcccgaaaggttaccgaggtgataccggagaacgaggaccg
cttggtgtgcctggatatgcaggtcttcccggtgagcccggtttccgtggcccatacggt
atcgatggttgcaacggaacagacggtgctatgggatcccccggttacccaggaattcca
ggtgaacgtggaccacaaggtccacctggtatgattggatatcggggtgattctggtgaa
ggtggcataaactccaagggtaccaaaggcgatatcggtgttgctggtattcccggtgtc
gtgggacagcgcggctggccgggtggtcgaggtcctgatggagttgacggagtgaccggc
atgccgggcgacgatggactgccgggattgagaggcgaacgtggcgaacagagcgaagat
ttctgtcctggagagccgggtgatcctggagagccttaccattactggggtggcaaaaac
gaaacggtcagcataggcatgaagggtccgaagggtgatcgtggatacgacggaatgccg
ggtttgcatgggatgaagggtgactcgggcatgcagggcgaacgcggacaaaaaggtttc
aagggtgaggaaggtaaattcggtgaccgtggcaaacagggtaaggagggcccaccaggt
gccgcgggcgagaagggagagaaaggtgctcctggatatgctggactggatggtaccgca
ggcgataaaggaccatcgggagacgatggacggccggggctgccgggagtgcagggaccc
ccaggaccgaaaggagaatatcgacccgagctagctccaatcgtaattggtccgcaagga
ccacagggagacataggaccacctggccgacccggcaacgttggtattcccggaaacaag
ggtcttcgagggccgatgggtccacctggtcagcctggagatccgggtctgaatggacga
gctggtccgaaaggtatctcacctcccgggcaacgcggtgacgatggtgaaggaggacaa
ccgggacctataggtacccgtggtactccgggacaggcgggatcgaagggtcaggttggt
ttcccaggccgaagcctgctgggagccaaaggtgagccgggtacaaatggattaaacgga
gactttggcgagaaaggtgatcagggcgatgatggtgaatcaggtgacaagggtttgccg
ggcattggagtcaacatcaccggaccaccgggaccagccggtttacctggacgggatgga
ccacccggcgatttgggcttcaacggatatactggtcagaaaggtgataaaggtttccgt
ggagaagactgtggcacttgtcctcccggtccgaaaggtgtaaagggcgaggatggtgac
atcggacgcccgggactcgacggatatgatggtaatcgcggtctaactggaccacgaggc
taccagggtatagccggaaagcaagggttgaagggtgtgatgggccgaaaaggcgaacgt
ggtgactttggcgaacgtggtgttccgggtgaaccgggacgtcctggtgtcattcgacgg
gcgaaagattttgttgacttaacgcccgaattgggagaacgaggcgatagaggacaacgg
ggtgaccagggtttgccaggagatttgggtgacttcggtgcagttggataccctggacga
cccggtgaaccgggagaatacggtgacgatggtgaatctggacgaccaggaaacgatggg
ttaccaggtattgatggtcgaaatggagctccgggtcgagatgcctatgtgaacgagtac
aacgtctggtccattcgcggaacgcccggtataccgggagacaaaggtgccaaaggagag
agtggtgaccagggtgatcgtggtgaaccgggtgcaatgtctgagatgatctacgatatc
gagggtcccaagggtgaaaagggcgtaatgggagacctcggaccaaagggtgaaaagggt
tacaaaggtgaagtgggtctgcatggattgcgtggtttagacgggccagctggtttgcct
ggtctcagcattcaggggccggaaggttacaagggctactacggtgtgattggtgaccat
ggaccagccggcatccctggtgaggatggactccctggaccagatggcattcctggacta
caaggattgcgtggtcaacgcggcgacccaggtcgtccaatactgatgggagaaaagggc
gtggaaggcgagggtggcttctttggcgagatcggtgacaagggattcaagggaccggaa
ggtaatcgcggaacaatgggtgaatctggtacgaagggcgagcgaggcgaaccgggacca
ttcggtaaatctggtctgcgtggaaacaagggtcagatgggagacatcatctacggggac
cgtggattgccgggattgccagggcgcaacggtttgcaggcaccgttcggcgacaaaggt
gaacgtggagagccgggtatggaaggattccccggaccgaagggtgagagaggcgaaatc
ggacgcgacggattgcccggacttcctggagatgatggactttcgggcgaacgaggtctg
caaggacgcatgggcgacatgggcgaagaaggttaccaaggagaacgtggctttactggc
gaccaaggtcatcctggtctgaccggaacgcgtggattacaaggattacggggactgaaa
ggattttcaggtgatcccggtgatatgggattccctggacggaatggagcgcctggacgt
aaaggagaacgtggcgattttggtgacatgggaccgcgtggtaggaaaggcggtgcgtcg
ttcagcggtatgaagggagaaatgggcgaggcaggaatgatgggcccgcctggatacaac
gcgcgtcctggaatgatgggaagaaagggtgaagagggagacgccggacaggtcatcgat
ggatatcagggagtgaagggacagaagggtgcaccaggtttccctggcattccaggtcgt
ccaggagcgaagggtgagcgaggcgatgttggagtgtttggaccaaaaggaatctccgga
gataaaggacgcgatggatatcccggaattgccggtcgtccaggacgtccggggccacgt
ggaccgctcggcccacgaggtgagcaaggctcaagaggtgaaactggagaaccgggcgaa
gatggcttaactggtttcgttggtgagaagggtatgcgcggtgacgtcggtatgattgga
ccttctggattgcctggaattgatggtgatccaggtttacccggaattcccggtaatgtt
atgatgcgatcagcacaacaaggtgaccaaggcgacccggcaccggagggactggaaggt
gatcaaggacctcctggactcaaaggacaacgaggctacacgggccgtaaaggtgaacag
ggattgcctggattcgtcggtatggtcggcatcgaaggacacgacggaccgaaaggacag
cgtggagatcctggtatgaagggtctcccgggcgagctacagacccgaaccgaacgcggc
gaccaaggagaggctgggtatgatggactcacgggacggccaggcattcccggcaacaaa
ggagcaccaggcgattatggtgacaacgggctgatgggtctacaaggtctcccaggcttc
gtaaacggtgcactgaagggcaagaagggtgagattggttttgaaggtgccccgggacag
gatggtctgcctggactgcctggtttggatggtgtgatgggttcccctggcccacgagga
ctggctggaagcatcggtccgattatgcccggtttccggggtgatattggtgatgatggt
ttaccaggcttggaaggaatgcccggcccaccaggattcccaggcgatcgaggattacag
ggatttcctggtttgaatggactccccggacctaagggccaacagggagaggaaggcgtt
gaaggctaccatggtttggttgggttgaaaggcatgaaaggagaggtaggtgatctaccg
ccactctcgaactggcgaccaacgcaacccggcgatcgaggaactcctggtgcacgcgga
gaacccggcgacgaaggagacatggggccgtcaggctatccgggaatgcgtggaccaaag
ggtatgcaaggcttacaaggagagcaaggcattgcaggagaggttggtttcaagggcgaa
cgtggtattgccggtccaccgggccgtaatggtatcgaagggcttcctggtttgccggga
ttgccaggcgaacaggccgcgcctcctccaccgccaaagaacttgggttacattttcgca
cgacactcgcagaaggtgaccatccccgagtgtcccatcaacacgtacaaactgtgggat
ggctactcgttagtgaatgtcatcgctagcagtcgctcctccggacaggatctgggtaca
gccggttcgtgtctgcggcgattcagcaccatgccgtttatgttctgtgatattaacaac
gtttgtaactacgcctcgaacaatgatgatacgatatggttggccacacccgagccgatg
ccaatgtcgatggcgccgataccggcagatcaggtcgagcgatatatttcgcgttgcacg
gtttgtgagtccaatacacgagtgatggctctgcacagtcaatcgatgagcattccggac
tgtccagaaggttgggaagagttgtggcttggatacagttatgcaatgcatacatcggat
aattccggaggattcggccaggactttgtatcgcctggatcatgcatggaagagttccga
ccacaaccggtcatcgaatgccatggacatggtacgtgcaacttctacgatggtatttcc
tccttctggttaacgatcatcgacgacgccatgcagttcaacaggcctcagcagatgaca
ttaaaagcacatcaaaccagcaaagtcagtcgatgcatcgtttgccgtcgaaaggccggc
atcatgcgtgcactgcacgggggcagttcgataaccgcatcggcccttcgcagaccgcag
acagccacggtgtcgcgtcctcaatatccgctacctccatctcaaccagtgtccccgcgg
agacgagtgtcagcgggcagacagcgtaaccgcaaccgcaaccagggctag
DBGET
integrated database retrieval system
