Anopheles funestus (African malaria mosquito): 125763895
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Entry
125763895 CDS
T09273
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun04512
ECM-receptor interaction
afun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125763895
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125763895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afun04147
]
125763895
00536 Glycosaminoglycan binding proteins [BR:
afun00536
]
125763895
Exosome [BR:
afun04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125763895
Glycosaminoglycan binding proteins [BR:
afun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125763895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
125763895
NCBI-ProteinID:
XP_049283533
LinkDB
All DBs
Position
2:complement(76340368..76376689)
Genome browser
AA seq
1816 aa
AA seq
DB search
MLRAADPTLPGGLETKDTVHRRRRCSVRSVTFCVTLFLTCMLQLVQPSTAVVCNQTVCDC
KGLRGAPGQIGPHGVPGQSGDPGDIGFDGPQGPRGEPGNRGEIGTSGPKGYRGDTGERGP
LGVPGYAGLPGEPGFRGPYGIDGCNGTDGAMGSPGYPGIPGERGPQGPPGMIGYRGDSGE
GGINSKGTKGDIGVAGIPGVVGQRGWPGGRGPDGVDGVTGMPGDDGLPGLRGERGEQSED
FCPGEPGDPGEPYHYWGGKNETVSIGMKGPKGDRGYDGMPGLHGMKGDSGMQGERGQKGF
KGEEGKFGDRGKQGKEGPPGAAGEKGEKGAPGYAGLDGTAGDKGPSGDDGRPGLPGVQGP
PGPKGEYRPELAPIVIGPQGPQGDIGPPGRPGNVGIPGNKGLRGPMGPPGQPGDPGLNGR
AGPKGISPPGQRGDDGEGGQPGPIGTRGTPGQAGSKGQVGFPGRSLLGAKGEPGTNGLNG
DFGEKGDQGDDGESGDKGLPGIGVNITGPPGPAGLPGRDGPPGDLGFNGYTGQKGDKGFR
GEDCGTCPPGPKGVKGEDGDIGRPGLDGYDGNRGLTGPRGYQGIAGKQGLKGVMGRKGER
GDFGERGVPGEPGRPGVIRRAKDFVDLTPELGERGDRGQRGDQGLPGDLGDFGAVGYPGR
PGEPGEYGDDGESGRPGNDGLPGIDGRNGAPGRDAYVNEYNVWSIRGTPGIPGDKGAKGE
SGDQGDRGEPGAMSEMIYDIEGPKGEKGVMGDLGPKGEKGYKGEVGLHGLRGLDGPAGLP
GLSIQGPEGYKGYYGVIGDHGPAGIPGEDGLPGPDGIPGLQGLRGQRGDPGRPILMGEKG
VEGEGGFFGEIGDKGFKGPEGNRGTMGESGTKGERGEPGPFGKSGLRGNKGQMGDIIYGD
RGLPGLPGRNGLQAPFGDKGERGEPGMEGFPGPKGERGEIGRDGLPGLPGDDGLSGERGL
QGRMGDMGEEGYQGERGFTGDQGHPGLTGTRGLQGLRGLKGFSGDPGDMGFPGRNGAPGR
KGERGDFGDMGPRGRKGGASFSGMKGEMGEAGMMGPPGYNARPGMMGRKGEEGDAGQVID
GYQGVKGQKGAPGFPGIPGRPGAKGERGDVGVFGPKGISGDKGRDGYPGIAGRPGRPGPR
GPLGPRGEQGSRGETGEPGEDGLTGFVGEKGMRGDVGMIGPSGLPGIDGDPGLPGIPGNV
MMRSAQQGDQGDPAPEGLEGDQGPPGLKGQRGYTGRKGEQGLPGFVGMVGIEGHDGPKGQ
RGDPGMKGLPGELQTRTERGDQGEAGYDGLTGRPGIPGNKGAPGDYGDNGLMGLQGLPGF
VNGALKGKKGEIGFEGAPGQDGLPGLPGLDGVMGSPGPRGLAGSIGPIMPGFRGDIGDDG
LPGLEGMPGPPGFPGDRGLQGFPGLNGLPGPKGQQGEEGVEGYHGLVGLKGMKGEVGDLP
PLSNWRPTQPGDRGTPGARGEPGDEGDMGPSGYPGMRGPKGMQGLQGEQGIAGEVGFKGE
RGIAGPPGRNGIEGLPGLPGLPGEQAAPPPPPKNLGYIFARHSQKVTIPECPINTYKLWD
GYSLVNVIASSRSSGQDLGTAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPM
PMSMAPIPADQVERYISRCTVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTSD
NSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYDGISSFWLTIIDDAMQFNRPQQMT
LKAHQTSKVSRCIVCRRKAGIMRALHGGSSITASALRRPQTATVSRPQYPLPPSQPVSPR
RRVSAGRQRNRNRNQG
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggccgcggaccccacgctcccggggggtctggaaactaaggacaccgtccac
cggaggcgccgatgttccgtacgctcggtgacattttgcgtgacacttttcctcacttgt
atgctccagcttgtacaaccatcaacggcagtggtctgtaaccagacggtatgtgactgc
aaaggattgaggggtgctccggggcagattggaccacacggtgtacctggccagagcggt
gatccaggagatattggcttcgacggtccacagggaccgcgcggtgaaccaggaaatcgc
ggcgagattggtacgagcggcccgaaaggttaccgaggtgataccggagaacgaggaccg
cttggtgtgcctggatatgcaggtcttcccggtgagcccggtttccgtggcccatacggt
atcgatggttgcaacggaacagacggtgctatgggatcccccggttacccaggaattcca
ggtgaacgtggaccacaaggtccacctggtatgattggatatcggggtgattctggtgaa
ggtggcataaactccaagggtaccaaaggcgatatcggtgttgctggtattcccggtgtc
gtgggacagcgcggctggccgggtggtcgaggtcctgatggagttgacggagtgaccggc
atgccgggcgacgatggactgccgggattgagaggcgaacgtggcgaacagagcgaagat
ttctgtcctggagagccgggtgatcctggagagccttaccattactggggtggcaaaaac
gaaacggtcagcataggcatgaagggtccgaagggtgatcgtggatacgacggaatgccg
ggtttgcatgggatgaagggtgactcgggcatgcagggcgaacgcggacaaaaaggtttc
aagggtgaggaaggtaaattcggtgaccgtggcaaacagggtaaggagggcccaccaggt
gccgcgggcgagaagggagagaaaggtgctcctggatatgctggactggatggtaccgca
ggcgataaaggaccatcgggagacgatggacggccggggctgccgggagtgcagggaccc
ccaggaccgaaaggagaatatcgacccgagctagctccaatcgtaattggtccgcaagga
ccacagggagacataggaccacctggccgacccggcaacgttggtattcccggaaacaag
ggtcttcgagggccgatgggtccacctggtcagcctggagatccgggtctgaatggacga
gctggtccgaaaggtatctcacctcccgggcaacgcggtgacgatggtgaaggaggacaa
ccgggacctataggtacccgtggtactccgggacaggcgggatcgaagggtcaggttggt
ttcccaggccgaagcctgctgggagccaaaggtgagccgggtacaaatggattaaacgga
gactttggcgagaaaggtgatcagggcgatgatggtgaatcaggtgacaagggtttgccg
ggcattggagtcaacatcaccggaccaccgggaccagccggtttacctggacgggatgga
ccacccggcgatttgggcttcaacggatatactggtcagaaaggtgataaaggtttccgt
ggagaagactgtggcacttgtcctcccggtccgaaaggtgtaaagggcgaggatggtgac
atcggacgcccgggactcgacggatatgatggtaatcgcggtctaactggaccacgaggc
taccagggtatagccggaaagcaagggttgaagggtgtgatgggccgaaaaggcgaacgt
ggtgactttggcgaacgtggtgttccgggtgaaccgggacgtcctggtgtcattcgacgg
gcgaaagattttgttgacttaacgcccgaattgggagaacgaggcgatagaggacaacgg
ggtgaccagggtttgccaggagatttgggtgacttcggtgcagttggataccctggacga
cccggtgaaccgggagaatacggtgacgatggtgaatctggacgaccaggaaacgatggg
ttaccaggtattgatggtcgaaatggagctccgggtcgagatgcctatgtgaacgagtac
aacgtctggtccattcgcggaacgcccggtataccgggagacaaaggtgccaaaggagag
agtggtgaccagggtgatcgtggtgaaccgggtgcaatgtctgagatgatctacgatatc
gagggtcccaagggtgaaaagggcgtaatgggagacctcggaccaaagggtgaaaagggt
tacaaaggtgaagtgggtctgcatggattgcgtggtttagacgggccagctggtttgcct
ggtctcagcattcaggggccggaaggttacaagggctactacggtgtgattggtgaccat
ggaccagccggcatccctggtgaggatggactccctggaccagatggcattcctggacta
caaggattgcgtggtcaacgcggcgacccaggtcgtccaatactgatgggagaaaagggc
gtggaaggcgagggtggcttctttggcgagatcggtgacaagggattcaagggaccggaa
ggtaatcgcggaacaatgggtgaatctggtacgaagggcgagcgaggcgaaccgggacca
ttcggtaaatctggtctgcgtggaaacaagggtcagatgggagacatcatctacggggac
cgtggattgccgggattgccagggcgcaacggtttgcaggcaccgttcggcgacaaaggt
gaacgtggagagccgggtatggaaggattccccggaccgaagggtgagagaggcgaaatc
ggacgcgacggattgcccggacttcctggagatgatggactttcgggcgaacgaggtctg
caaggacgcatgggcgacatgggcgaagaaggttaccaaggagaacgtggctttactggc
gaccaaggtcatcctggtctgaccggaacgcgtggattacaaggattacggggactgaaa
ggattttcaggtgatcccggtgatatgggattccctggacggaatggagcgcctggacgt
aaaggagaacgtggcgattttggtgacatgggaccgcgtggtaggaaaggcggtgcgtcg
ttcagcggtatgaagggagaaatgggcgaggcaggaatgatgggcccgcctggatacaac
gcgcgtcctggaatgatgggaagaaagggtgaagagggagacgccggacaggtcatcgat
ggatatcagggagtgaagggacagaagggtgcaccaggtttccctggcattccaggtcgt
ccaggagcgaagggtgagcgaggcgatgttggagtgtttggaccaaaaggaatctccgga
gataaaggacgcgatggatatcccggaattgccggtcgtccaggacgtccggggccacgt
ggaccgctcggcccacgaggtgagcaaggctcaagaggtgaaactggagaaccgggcgaa
gatggcttaactggtttcgttggtgagaagggtatgcgcggtgacgtcggtatgattgga
ccttctggattgcctggaattgatggtgatccaggtttacccggaattcccggtaatgtt
atgatgcgatcagcacaacaaggtgaccaaggcgacccggcaccggagggactggaaggt
gatcaaggacctcctggactcaaaggacaacgaggctacacgggccgtaaaggtgaacag
ggattgcctggattcgtcggtatggtcggcatcgaaggacacgacggaccgaaaggacag
cgtggagatcctggtatgaagggtctcccgggcgagctacagacccgaaccgaacgcggc
gaccaaggagaggctgggtatgatggactcacgggacggccaggcattcccggcaacaaa
ggagcaccaggcgattatggtgacaacgggctgatgggtctacaaggtctcccaggcttc
gtaaacggtgcactgaagggcaagaagggtgagattggttttgaaggtgccccgggacag
gatggtctgcctggactgcctggtttggatggtgtgatgggttcccctggcccacgagga
ctggctggaagcatcggtccgattatgcccggtttccggggtgatattggtgatgatggt
ttaccaggcttggaaggaatgcccggcccaccaggattcccaggcgatcgaggattacag
ggatttcctggtttgaatggactccccggacctaagggccaacagggagaggaaggcgtt
gaaggctaccatggtttggttgggttgaaaggcatgaaaggagaggtaggtgatctaccg
ccactctcgaactggcgaccaacgcaacccggcgatcgaggaactcctggtgcacgcgga
gaacccggcgacgaaggagacatggggccgtcaggctatccgggaatgcgtggaccaaag
ggtatgcaaggcttacaaggagagcaaggcattgcaggagaggttggtttcaagggcgaa
cgtggtattgccggtccaccgggccgtaatggtatcgaagggcttcctggtttgccggga
ttgccaggcgaacaggccgcgcctcctccaccgccaaagaacttgggttacattttcgca
cgacactcgcagaaggtgaccatccccgagtgtcccatcaacacgtacaaactgtgggat
ggctactcgttagtgaatgtcatcgctagcagtcgctcctccggacaggatctgggtaca
gccggttcgtgtctgcggcgattcagcaccatgccgtttatgttctgtgatattaacaac
gtttgtaactacgcctcgaacaatgatgatacgatatggttggccacacccgagccgatg
ccaatgtcgatggcgccgataccggcagatcaggtcgagcgatatatttcgcgttgcacg
gtttgtgagtccaatacacgagtgatggctctgcacagtcaatcgatgagcattccggac
tgtccagaaggttgggaagagttgtggcttggatacagttatgcaatgcatacatcggat
aattccggaggattcggccaggactttgtatcgcctggatcatgcatggaagagttccga
ccacaaccggtcatcgaatgccatggacatggtacgtgcaacttctacgatggtatttcc
tccttctggttaacgatcatcgacgacgccatgcagttcaacaggcctcagcagatgaca
ttaaaagcacatcaaaccagcaaagtcagtcgatgcatcgtttgccgtcgaaaggccggc
atcatgcgtgcactgcacgggggcagttcgataaccgcatcggcccttcgcagaccgcag
acagccacggtgtcgcgtcctcaatatccgctacctccatctcaaccagtgtccccgcgg
agacgagtgtcagcgggcagacagcgtaaccgcaaccgcaaccagggctag
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integrated database retrieval system
