Anopheles funestus (African malaria mosquito): 125763896
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Entry
125763896 CDS
T09273
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun04512
ECM-receptor interaction
afun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125763896
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125763896
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afun04147
]
125763896
00536 Glycosaminoglycan binding proteins [BR:
afun00536
]
125763896
Exosome [BR:
afun04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125763896
Glycosaminoglycan binding proteins [BR:
afun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125763896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
125763896
NCBI-ProteinID:
XP_049283535
LinkDB
All DBs
Position
2:76376878..76387284
Genome browser
AA seq
1777 aa
AA seq
DB search
MGTRIKWLITTSLLVWFGQHAYAQLWASNSNVGGGIGMYKRQEQDHPRHMQPQIDPSYGL
IDTASGPQGPPSKNCTASGCCVPKCFAEKGARGFPGPMGLKGVKGVRGFPGSEGLPGDKG
TKGEPGPFGLQGPKGDRGRDGLPGYPGIPGTNGVPGLSGAPGIPGRDGCNGTDGLPGFEG
LPGNPGPRGFPGVPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGKEGPKGHPG
LPGEKGVPGVPGLRGERGDKGVCIKGEKGQKGSKGEEVYGATGTTTTTGPKGEKGDRGDS
GEPGRPGEKGQAGDRGQLGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGLH
GLKGQSGPKGEPGRDGIPGQPGISGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGF
DGEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGL
RGEPGQPGYGMPGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGMPGRDG
EKGEPGRPGLSGAKGERGLKGEIGGRCTDCRPGLKGDKGERGYAGEPGRPGSSGIPGERG
YPGMPGEDGTPGLRGEPGPKGDPGLLGPPGPSGEPGRDAEIPMDQLKPIKGDKGELGEKG
LLGIKGEKGFPGPVGPEGKVGMRGMKGDKGRPGEAGIDGAPGAPGKDGLPGRHGQTLKGE
PGLKGNVGYAGDKGDKGYSGLKGEPGKCANVPPNIMEAIRGPQGSQGEKGAPGIQGMRGE
KGDMGEQGRTGAQGSAGPPGAPGPVGPRGLTGHRGEKGNSGPLGPPGAPGRDGIPGAPGL
PGSKGLKGDPGLSMVGPPGPKGNPGLRGPKGDRGGMGDRGDPGTPGSVGYPGEKGDLGTP
GPPGYPGEVGPKGEPGPKGPAGHPGAPGRPGVDGVKGLPGLKGDIGAPGVIGLPGQKGDM
GQAGNDGLKGFQGRKGMMGAPGIQGVRGPQGAKGEQGEKGDRGEIGMKGLMGQTGPPGMV
GPKGDKGLSGLPGPACLPGLSGEKGDKGYTGPEGPPGEAGAASEKGQKGEPGVPGLRGND
GLPGLEGPSGPKGDAGVPGYGRPGPQGEKGDVGLTGINGLPGLNGVKGDMGVTGFPGVKG
DKGTTGLPGVPGAPCMDGLPGVEGPVGPRGYDGEKGFKGEPGRIGERGDQGEKGDLGITG
PVGLMGRKGDRGVPGSPGLPATVAAIKGDKGEPGFPGAIGRPGKVGVPGLPGDMGSKGEM
GIQGLPGLPGPAGLNGLPGMKGDMGPMGEKGDTCPVVKGEKGLPGRPGKTGRDGPPGLTG
EKGDKGLAGLPGPMGPPGPAGPLGRQGEKGDRGDSGLMGRPGQDGLPGPQGQRGLPGPQG
EKGDHGPPGFVGPKGEKGERGREGLNGLNGPQGLKGDRGMPGLEGVAGLPGMVGEKGDRG
LPGMAGLNGVSGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGMPGLAGPSGIPGAPGA
PGEMGLRGFEGARGLQGLRGDVGPEGRSGRDGAPGLPGPKGEPGRDCESAPYYTGILLVR
HSQSDEVPVCEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLPILACGQNNV
CNYASRNDRTFWLSTSAPIPMMPVTENEMRPYISRCTVCEAPTNVIAVHSQTLHIPECPN
GWDGLWIGYSFLMHTAVGHGGGGQSLSGPGSCLEDFRATPFIECNGGKGHCHYYETQTSF
WLVSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVCIRH
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggggacccgaataaaatggttaattactacctcgttgctagtctggtttggacaacat
gcgtatgcgcaactatgggcgtccaactccaatgtcggcggtggtatcgggatgtataag
cgacaggaacaggaccatccaagacacatgcaaccacagatcgatccgagctacggtctc
atcgacactgccagcggcccacaaggaccaccgtccaagaactgcactgcaagcggctgt
tgtgtaccgaaatgttttgccgagaagggcgcccgaggcttcccgggcccgatgggtttg
aaaggcgtcaagggcgtccgtggatttcccggctcggaaggcttaccgggcgacaaggga
accaagggtgaaccgggcccgtttggtctccagggaccgaaaggtgatcgtggtcgggac
ggattgcccggctatccaggcattcccggtacaaacggtgttcccggattgtcgggtgcg
cccggtatacccggacgtgacggatgcaacggtacggacggtttgcccggctttgaagga
ctgcccggaaatccgggtccacgcggttttcccggtgttcccggaacgaagggtgaaaag
ggagagcccgcacggcatccggaaaactacaacaagggccagaaaggtgagcctggtaac
gatgggctggaaggattgcccggaccgcaaggtaaggaaggacccaaaggacatcccgga
ctgcccggtgaaaagggtgtgcccggagtacccggtttgaggggagaacgaggtgacaag
ggcgtgtgcattaagggcgagaagggccagaaaggttcgaagggtgaggaagtgtacggt
gcaacgggtacgacaacgacaacaggaccgaagggcgagaaaggtgatcggggcgattcg
ggtgaaccgggacggcccggagagaaaggacaggccggtgaccgcggacaattgggcgag
cgtgggcacaagggcgagaagggtttgcctggacaaccgggtccaagaggacgtgatggt
aactttggaccggtcggtcttcccggacagaaaggtgatcgcggatcggaaggattgcac
ggactgaagggtcaaagtggaccgaaaggtgaaccgggacgggatggcatccctggacaa
cccggtatctccggaccagcgggtgcgccaggcggtggcgaaggacgcccgggggcaccg
ggtccgaagggaccgcggggctacgaaggtccacaaggaccgaaaggtatggatggattc
gatggcgaaaagggcgaacgtggacagatgggtcctaagggcggtcagggtgtaccgggc
cgaccgggccctgaaggtatgcccggtgacaaaggtgacaagggcgaatccggttcagtc
ggtatgcctggaccacagggaccacgtggctatccgggacaacccggacccgagggtctt
cgcggtgaaccaggtcagccgggttatggaatgccaggacaaaagggtaatgccggtatg
gctggattccctggcttgaagggacagaaaggagagcgtggcttcaagggtgtgatgggt
acgcctggtgacgcaaaggaaggacgcccgggagcacccggaatgccgggacgtgacggc
gaaaagggtgaaccgggtcgtccgggtctcagcggagcgaagggtgaacgtggattgaaa
ggtgaaattggtggccgctgtactgattgccgaccgggactgaagggcgacaagggcgaa
cgtggatacgccggagaaccaggacgaccaggatcgagcggtattccgggcgagcgaggc
tatccgggaatgccgggagaggacggtacacccggactgcgcggcgaaccaggaccaaag
ggtgacccgggattgttgggaccaccgggtccatccggagagccgggacgcgatgccgaa
attcccatggatcaactgaaacccatcaagggcgacaaaggtgaactgggcgagaagggt
ctgctaggtattaagggtgagaaaggattcccaggaccggttggaccggaaggaaaggtg
ggtatgcgtggcatgaaaggcgacaaaggacgaccgggcgaggcaggtatcgatggagcg
ccgggcgcaccgggtaaggacggactgccaggacgacacggacaaacgctcaaaggtgaa
cccggtctgaagggtaatgttggttacgcgggcgacaagggtgacaaaggttactccgga
ctgaagggcgaaccgggcaaatgtgctaacgtaccaccgaacataatggaagcgattcgt
ggtccgcaaggatcgcagggcgagaaaggcgctcccggtatccagggaatgaggggcgaa
aagggtgatatgggtgagcagggacgcacgggtgcacagggtagtgctggaccgccgggc
gcaccgggaccagtaggaccgcgtggtttgacgggacaccgaggcgagaagggaaattcg
ggaccgcttggaccaccgggagctccgggacgggatggaatacctggtgcaccgggactt
cccggctcgaagggtctcaagggtgatccgggtctatcgatggtgggtccacccggcccc
aaaggtaatccaggtttgcgtggtccgaaaggtgatcggggcggtatgggcgatcgaggc
gatccaggaacgcccggctccgttggctacccgggtgagaagggagatttgggaacaccc
ggtcctcctggctatcctggcgaggttggaccgaagggtgaaccgggcccgaaaggaccg
gccggacatcccggagcaccgggacgtcccggtgtggatggtgtgaaaggtttgccggga
ctgaagggtgacatcggggcgccgggtgtgataggactgcccggacagaagggcgatatg
ggacaggcgggtaacgacggtctgaagggtttccaaggtcgcaagggcatgatgggtgct
ccgggcattcaaggcgttcgtggaccgcaaggagcgaagggtgaacagggcgagaaggga
gatagaggagagatcggtatgaagggtttgatgggacaaactggaccgcccggtatggtg
ggacctaagggtgacaagggtctttccggtttgccaggaccggcctgcttaccaggactt
tccggcgagaagggtgacaaaggatacactggaccggaaggaccgccaggcgaagcagga
gcagcatccgagaagggacagaaaggagaaccaggcgtaccgggactccgtggtaatgat
ggactccccggattggaaggcccatccggaccgaaaggagatgcgggtgtgccgggatat
ggccgacctggaccgcagggcgagaagggtgatgtcggcctaacgggcattaacggactg
ccgggattgaatggtgtgaagggcgatatgggagtgacaggattcccgggagtaaagggt
gacaagggtacgaccggtttgcccggtgttcccggagcaccctgtatggatggcttgccg
ggcgttgagggtccagttggaccacgaggttatgacggtgagaagggtttcaagggtgaa
ccgggccgtatcggtgaacggggcgaccagggcgaaaagggcgatctcggaattactgga
ccggttggtcttatgggccgtaagggtgatcgcggtgtacctggttcgcctggtcttccc
gcaactgttgccgccattaagggtgataagggtgaacctggcttcccgggcgctattggc
cgacctggtaaggtgggagtaccgggactaccgggtgacatgggttcgaagggagagatg
ggcattcagggattacctggattgccgggcccggctggattgaacggactgccaggcatg
aagggcgatatgggacccatgggcgagaagggtgacacctgcccggttgtaaagggcgaa
aagggtctaccaggacgaccaggaaagacgggccgcgatggaccaccaggactgacgggc
gagaagggtgacaagggtttggcgggcttgccgggaccaatgggacctccgggacctgcg
ggaccgcttggacggcagggcgagaaaggtgatcgaggtgattccggtttaatgggtcgc
cctggtcaggatggactgccgggaccgcaaggacagcgcggtttgccgggacctcaaggc
gaaaagggtgatcacggaccacccggtttcgtcggaccgaagggtgagaagggcgagcga
ggacgggaaggattaaacggtttgaatggtccgcaaggtttgaagggtgaccgtggcatg
cccggactagaaggtgtcgccggtctgcccggtatggtgggtgagaaaggtgaccgtgga
ttaccgggtatggccggtctgaacggtgtttcgggtgagaagggccagaagggagaaacg
ccacagcttccaccccaacgcaagggaccacccggaccgcctggttttaacggaccgaag
ggtgacaagggtatgccgggcttggcgggaccgtctggtattcccggtgctccaggtgca
cctggcgagatgggacttcgaggattcgaaggtgcgcgcggtttgcagggtctccggggt
gacgtcggacctgaaggacgaagcggacgcgatggagctccgggtctgccaggtccaaag
ggtgaaccaggccgggactgtgaatcggcaccgtactacaccggtatactgttggtacgg
cacagccaatcggatgaagtgcccgtttgcgaaccgggtcatctgaagctgtgggacggt
tactcgctactgtacgtcgatggtaacgactacccacacaaccaggacctcggatcggca
ggttcatgcgtgcggaaattctccacactaccgatactggcttgtggtcagaacaatgtt
tgcaattatgcgtcgcgaaacgatcgaacattctggctgtcgacgtcggcaccgattccg
atgatgccggtcacggagaacgagatgcgaccgtacatttcgcgctgcacggtatgcgaa
gcgcccactaatgttatcgctgtgcacagccagacgcttcatattcccgaatgtccgaat
ggatgggatggtttatggatcggttacagtttccttatgcacactgccgtcggccatggt
ggtggaggtcagtcactgtccgggccgggatcgtgtctggaggacttccgtgccacgccc
ttcattgaatgtaacggaggcaagggtcactgccattattatgaaacccaaacctccttc
tggctggtgtcgctcgaggaccaccagcagttccagcgaccggagcagcaaacgctcaag
gctggtaatctgctcagccgagtatctcggtgccaagtgtgcatccgccattga
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