Anopheles funestus (African malaria mosquito): 125764925
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Entry
125764925 CDS
T09273
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03020
RNA polymerase
afun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125764925
09124 Replication and repair
03420 Nucleotide excision repair
125764925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afun03021
]
125764925
03400 DNA repair and recombination proteins [BR:
afun03400
]
125764925
Enzymes [BR:
afun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125764925
Transcription machinery [BR:
afun03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125764925
DNA repair and recombination proteins [BR:
afun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125764925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
125764925
NCBI-ProteinID:
XP_049285609
UniProt:
A0A4Y0BUG1
LinkDB
All DBs
Position
2:14858030..14861991
Genome browser
AA seq
1175 aa
AA seq
DB search
MYENEEDHFEEEDPEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIELTAEAQHSSGEIENPTRYLLKFDQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTKLVEGQDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRVIAILPYVKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLRKNHIDMLKDRDYNNYGWQVLVASG
VVEYIDTLEEETVMIAMTPYDLKQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPNRQTCQG
MRNALYDKLDEDGIIAPGLRVSGDDVVIGKTITLPETDDDLDGTTKRYTKRDGSTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GITPDIIINPHAIPSRMTIGHLIECIQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVKLPYAAKLLFQELMAMNIAPRLMVL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaaatgaagaagatcatttcgaggaggaagatccagaggagatttcgcacgaa
ctgtggcaggaagcatgctggatcgtcatcaacgcatatttcgacgaaaagggtctcgtg
cggcagcagctggacagcttcgatgagttcatacaaatgtcggtacagcgaatcgtggaa
gattcgccggccatcgagctgacagcggaagcgcaacattcgtcaggcgagattgaaaac
cctacgcgctacctgctaaagtttgaccagatctatctgtcgaaaccgacgcactgggaa
aaggatggttccccctcgccgatgatgccgaacgaggcacgtctacgcaatctgacctac
tccgcaccgctgtacgtagacattaccaagacgaagttggtcgaaggccaagatccggtc
gaaacacaacatcagaaaacgttcattggcaagattcctatcatgttgcgttccacgtac
tgtctgctgtcacagctaactgatcgtgatttgactgagttgaacgaatgtccgctcgat
ccgggcggttactttattatcaacggttcggaaaaggtactgatcgcacaggagaagatg
gccaccaatacggtgtacgtgttcagcatgaaagatggcaaatatgcttacaaaacggag
atacggtcctgtctggaacacagttcacgacccacctcgacgctgtgggtgaacatgatg
gctcgaggcggtcagagtataaaaaaatcggccatcgggcagcgcgtgatagcgatcttg
ccgtacgtgaagcaggaaattccgatcatgatcgtgttccgtgcgctcgggttcgtcgct
gatcgagacatcctcgaacacatcatttacgactttgacgatccggaaatgatggaaatg
gtgaagccgtcgctagatgaagcgttcgtcgtgcaggagcaaaatgtagcgcttaacttt
atcggagctcgtggtgcacggccgggcgttactaaggacaagcgtatcaagtacgcgaaa
gaaatcctgcagaaggaaatgttgcctcacgtgggtgtgtccgatttttgtgaaaccaag
aaagcatacttcctcggatacatggtgcatcggttgctgctggctgcgctaggccgtcgc
gagctggacgatcgtgatcactacggtaacaagcgtttggatctggccggtcccttgctg
gcgtttttgttccgtggactattcaaaaacctaatgaaggaggtacgaatgtacgcacag
aagttcattgatcgtggaaaggactttaacctcgagctggccatcaagacgaagattatt
acggacggtttgcgctattcgctggccacgggtaattggggcgatcagaagaaagcccat
caggcacgcgctggtgtgtctcaggtgttgaaccgtttgacgtttgcctctacattgagc
catttacgacgcgttaattcaccgatcggacgtgacggcaagctggcaaaacctcgacag
ctacacaacacactttggggcatgatttgtcccgccgaaacgcctgaaggtgctgcggtc
ggtttggtgaagaatctggcactaatggcgtacatttccgtcggttctcagccgtctccc
attctcgagttcttggaagagtggtctatggaaaacttggaagaaattgcaccgtccgct
attgctgatgcaaccaagatctttgtcaacggctgttgggtgggtatccatcgcgatccg
gaacagttgatggcaacgttgaggaagctgcgccgtcagatggatattatcgtgtctgaa
gtgtcgatgatccgtgatattcgggatcgtgaaattcgcatctacacggacgccggtcgt
atctgtcggccactgctgatcgtggagaatggatcactactgttgcgcaaaaaccacatc
gacatgttgaaggatcgagattacaataactatggatggcaggtgctggtggcgtccggt
gtggtcgagtacatcgacactctcgaggaagaaacggttatgatcgcgatgacaccgtac
gatctgaaacaggataaagagtacgcctactgtacgacctacacacactgcgagattcac
ccggcgatgattttaggagtctgtgcgtccattattccctttccggatcacaatcagagc
ccgcgtaacacttaccagagcgctatgggtaagcaggcgatgggagtctacatcaccaac
ttccacgtgcggatggacacgcttgcgcacgtgctttactatccgatgaaaccgctcgta
acgacacgttcgatggagtaccttcgtttccgtgagttgccggccggtatcaactcgatc
gtagcaattctctgctacacgggctacaaccaggaggacagcgttatcctgaacgcatcg
gccgtcgagcgcggtttcttccggtcggtgttctatcgatcgtacaaggattcggaaagc
aagcgcatcggtgaccaggaagaacaattcgagaaaccaaaccggcagacgtgtcagggc
atgcggaatgcgctgtacgataagttagacgaggatggtattattgcgcctggattgcgt
gtttccggagatgacgttgtcattggcaagacgatcacgctgcccgaaacggatgacgat
ctggacgggacgacgaaacggtacaccaagcgagatgggtcaacgtttttgcgaaactcc
gaaaccggtatcgtcgatcaggtgatgctgacccttaacagcgaaggatacaagttttgc
aagatccgtgtgcgatcggtacgcattccacagatcggtgataagtttgcttcgcgccac
ggacagaaaggtacgtgcggtattcagtaccgccaggaagatatgccgtttacgtgcgag
ggcattacgccggacattatcatcaacccgcatgctatcccgtcgcgtatgaccattggc
catttgatcgagtgcatccaggggaagctgggttcaaacaagggcgaaatcggtgacgca
acgccattcaacgatgcggtaaacgtgcagaagatttccaccttcctgcaggagtacggt
taccatctgcgtggtaacgaggtcatgtacaatgggcacaccgggcgcaagatcaatgcg
caagttttcctcggtccgacctactaccagcgtctgaagcatatggtggacgacaagata
cattcgcgggcccgtggtccggtgcagatactcgtacgacaacccatggaaggtcgtgct
agggacggtggcttacgtttcggtgagatggaacgtgattgtcaaatttcgcacggtgcg
gcacagtttttgcgcgaacgtttgttcgaggtatccgatccgtaccggattcacgtgtgc
aacttctgcggactgatcgcgatcgctaatctgcgcaacaatacgttcgagtgcaagggt
tgcaaaaataagacacagatatctcaggtgaagcttccgtacgctgcgaaactcttattc
caggaactgatggcaatgaacattgcgccacgattgatggtactgtaa
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integrated database retrieval system
