Anopheles funestus (African malaria mosquito): 125765550
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Entry
125765550 CDS
T09273
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125765550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afun03019
]
125765550
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125765550
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125765550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
125765550
NCBI-ProteinID:
XP_049286791
UniProt:
A0A182RWE1
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Position
2:65255124..65263705
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AA seq
929 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSALLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMDPAQRE
KEEISTWLTSSITSLQIQIDQFECEIESLLAGKKKKLDKDKQDKMDELKGKLERHKFHVT
KLETLLRMLDNDGVEVEQIKKIKEDVEYYIDSSQEPDFEENEYIYDDIIGLDDVEISGIP
VSTGTDSNNSNETAGSPSSLISGTSPAQSPVLNYSASTLHNHSSDLSADNNNLNEKRSKS
EGTKITPVKPTAIRASKVDPSVAAVSNAVNNNGSSNSTSNSSSTISNNNTSKTGLISSTP
SKNHTNAAAALPNMLVLPQPPNSIPIIGPAFAAVAKQHPSEYIQNGSILQPSTPTTGTGA
SPSSASGPLQTQAPNASNVFSSLSQIINTSQPKLSQQQQQQQQTQNSLPSAAAVVAAANS
SSVQSTTQSSASSQQQTQQQAQPPQQQSQQIPPGQNSMLLHNALSSASSTESNNHVMSTS
SASTISSSGANVINNCVSPSNSAVSSRASPSLMSPPQQQQQQQLLNGPTTLAQEVINRTG
VLETGPSSNPNALMQQQSQQQQPNPQGAAAVATVASTAQQQAAAAAAAAAAAAAAAAQAA
AVAAVAGQQQQQSQQQQPQPQPADSRQAGPVPSNQTPQTQSGGPSFMVDASGVPTGANAG
NLLPTSSATAITNGPNTIINTNSSISNAANVNSGPGGMKPTAGTHEACIPPLLGVAPLGT
SKLQKEHQIQFQLMEAAYYHLPTPSDSERLRPYLQRQPVQTPPHFPQQQLPHSETVEFFQ
RLSPETLFFVFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTY
IYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcgaaagttgcaaggtgaaatcgatcggtgtctgaagaaagtcactgag
ggagtagaaacgtttgaagatatttggcagaaagttcacaatgctacaaatagcaatcaa
aaagaaaagtatgaagcggatctcaagaaggaaattaaaaagctacagcgattacgcgat
caaatcaaatcatggatcgcttccggcgagatcaaggataaaagcgctttgctggaaaac
cgtcggctcatagaaacccaaatggagcggtttaaggtggtcgaacgggaaacgaaaacg
aaagcatactcgaaggagggtcttggcgcggcccagaagatggatcctgcgcagcgagag
aaggaagaaattagcacgtggctaacgtcgtccattacctcgctgcagatacagatcgat
cagttcgagtgtgagatcgagtcgcttttagcggggaagaagaagaaactcgataaggat
aagcaggacaagatggacgaactgaaagggaagctggagaggcataagttccatgtcacc
aagctggagacgctgctgcgaatgctcgacaatgacggtgtcgaggtagagcagatcaag
aagatcaaggaagatgtcgaatactacatcgattcctcccaggagcccgactttgaggag
aacgaatacatctacgatgatatcatcgggctagatgacgtggaaatctctggtatcccg
gtgtcgaccggtacggatagcaataacagcaatgagacagcaggatcaccaagcagtcta
atatctggaactagtccggcgcagtcaccggtgctaaattacagtgccagtacgttacac
aatcacagcagcgatctgtccgccgataacaacaatctgaatgagaaacgttcgaagagc
gagggcacgaagattacgccggtgaaaccgaccgcaatccgcgctagcaaggtggacccg
tccgtcgcggctgtcagtaatgccgttaacaacaatggcagcagtaatagcaccagtaat
agtagtagtactatcagcaacaacaatacgtccaagaccgggctgatcagctccacgccc
agcaaaaatcatactaatgctgccgcggcgttacccaacatgttggtgctaccacagccg
cccaacagtatacccatcattggacccgcttttgctgccgttgcaaaacaacatcctagt
gagtatatacaaaatggttctatactccagcccagcacgcccaccacgggaactggcgcg
tcaccatcgtcagcgagtggcccactgcaaacgcaagcaccgaatgcatcgaatgtcttt
agcagcctcagtcagataattaatacatctcaacctaagcttagtcagcaacagcagcaa
cagcagcaaacgcagaatagtttaccgagcgctgccgccgttgtcgctgcagccaacagc
agtagtgtgcagtctacgacacagtcgagcgcatcgtcacagcagcaaacgcagcagcag
gcacagccaccacagcaacaatcccagcagattcctcccggtcagaattccatgctactt
cacaatgccttgtcgtcggcatcgagtacggagagcaacaatcatgtaatgagtacatcg
tccgcgtctaccatcagtagtagcggggcgaacgttattaataactgtgtctctcctagc
aattccgcagtcagtagcagagcgtcgcccagtttgatgtcaccaccgcagcagcagcag
caacagcagttgttgaacggtcccactacactcgcgcaagaagtgataaatagaacagga
gtactcgaaactggtccaagctccaatccaaacgcgctaatgcagcagcagagccaacag
caacaacctaatccccagggtgcagcagcggtagcgacggtggcatccactgcgcagcag
caagcagcagcggcggcggccgcagcggcagcagcagcagcagctgctgcacaagcagcg
gcagtggccgcggtggctggtcagcagcaacagcaatcgcaacagcagcaaccacaacca
cagccagcagattcgagacaggctgggccagttccttcgaatcaaaccccacaaacacaa
tccggcgggccgtcgttcatggtcgatgcgagcggtgtaccaactggggccaacgcaggc
aacctactaccaacatcgtcagctactgccatcacgaatggaccgaacacgatcattaac
acaaactctagtatttcgaacgccgctaacgtaaacagcggccccggaggcatgaagccc
actgccggtacacacgaggcctgtataccgccgctacttggcgtggcacctttaggcacg
tcaaaactacagaaggagcatcaaatacaattccaactcatggaagccgcctactatcat
ctgccaacaccaagcgattcagagaggctaaggccgtacttgcaacgtcaacctgtccaa
actccaccgcactttccacagcaacaacttccacattctgaaacggtagagtttttccag
cgtctatcacccgaaacgctctttttcgtgttttactacatggagggaacgaaggctcaa
tatttagccgctaaggcgctgaagaaacagagctggagatttcatacgaaatatatgatg
tggttccagcgccacgaagaaccgaaagtgatcaacgaagaatacgagcagggaacctac
atctattttgactatgaaaaatggggccagcgtaaaaaggaagggtttacgtttgaatac
aagtacttagaagacagggacctgaattga
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